co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0046865: terpenoid transport	0.00E+00
3	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
4	GO:0006983: ER overload response	0.00E+00
5	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0015012: heparan sulfate proteoglycan biosynthetic process	5.49E-07
8	GO:0006024: glycosaminoglycan biosynthetic process	5.49E-07
9	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.89E-05
10	GO:0032469: endoplasmic reticulum calcium ion homeostasis	1.02E-04
11	GO:0034975: protein folding in endoplasmic reticulum	1.02E-04
12	GO:0016337: single organismal cell-cell adhesion	1.02E-04
13	GO:0008202: steroid metabolic process	1.12E-04
14	GO:0043066: negative regulation of apoptotic process	2.40E-04
15	GO:0008535: respiratory chain complex IV assembly	2.40E-04
16	GO:0010155: regulation of proton transport	2.40E-04
17	GO:0052541: plant-type cell wall cellulose metabolic process	2.40E-04
18	GO:0009863: salicylic acid mediated signaling pathway	3.32E-04
19	GO:0080163: regulation of protein serine/threonine phosphatase activity	3.99E-04
20	GO:0080168: abscisic acid transport	3.99E-04
21	GO:0071398: cellular response to fatty acid	3.99E-04
22	GO:0015783: GDP-fucose transport	3.99E-04
23	GO:0009410: response to xenobiotic stimulus	3.99E-04
24	GO:0015692: lead ion transport	3.99E-04
25	GO:0031022: nuclear migration along microfilament	3.99E-04
26	GO:0071323: cellular response to chitin	5.73E-04
27	GO:0055070: copper ion homeostasis	5.73E-04
28	GO:0033617: mitochondrial respiratory chain complex IV assembly	5.73E-04
29	GO:0009902: chloroplast relocation	7.62E-04
30	GO:0006464: cellular protein modification process	9.62E-04
31	GO:0009229: thiamine diphosphate biosynthetic process	9.62E-04
32	GO:0006665: sphingolipid metabolic process	9.62E-04
33	GO:0009228: thiamine biosynthetic process	1.17E-03
34	GO:0010044: response to aluminum ion	1.65E-03
35	GO:0046470: phosphatidylcholine metabolic process	1.65E-03
36	GO:0009850: auxin metabolic process	1.90E-03
37	GO:0006605: protein targeting	1.90E-03
38	GO:0006367: transcription initiation from RNA polymerase II promoter	2.17E-03
39	GO:0015780: nucleotide-sugar transport	2.45E-03
40	GO:0009835: fruit ripening	2.45E-03
41	GO:0007338: single fertilization	2.45E-03
42	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.74E-03
43	GO:0043067: regulation of programmed cell death	2.74E-03
44	GO:0009086: methionine biosynthetic process	2.74E-03
45	GO:0006855: drug transmembrane transport	2.77E-03
46	GO:0043069: negative regulation of programmed cell death	3.05E-03
47	GO:0010629: negative regulation of gene expression	3.05E-03
48	GO:0006486: protein glycosylation	3.19E-03
49	GO:0019684: photosynthesis, light reaction	3.36E-03
50	GO:0009089: lysine biosynthetic process via diaminopimelate	3.36E-03
51	GO:0000038: very long-chain fatty acid metabolic process	3.36E-03
52	GO:0045037: protein import into chloroplast stroma	3.69E-03
53	GO:0030150: protein import into mitochondrial matrix	5.46E-03
54	GO:0080147: root hair cell development	5.46E-03
55	GO:0000027: ribosomal large subunit assembly	5.46E-03
56	GO:0009814: defense response, incompatible interaction	6.64E-03
57	GO:0009693: ethylene biosynthetic process	7.06E-03
58	GO:0006413: translational initiation	7.28E-03
59	GO:0009738: abscisic acid-activated signaling pathway	8.03E-03
60	GO:0010087: phloem or xylem histogenesis	8.35E-03
61	GO:0006470: protein dephosphorylation	8.93E-03
62	GO:0007166: cell surface receptor signaling pathway	8.93E-03
63	GO:0002229: defense response to oomycetes	1.02E-02
64	GO:0010193: response to ozone	1.02E-02
65	GO:0032502: developmental process	1.07E-02
66	GO:0030163: protein catabolic process	1.12E-02
67	GO:0009567: double fertilization forming a zygote and endosperm	1.17E-02
68	GO:0010029: regulation of seed germination	1.38E-02
69	GO:0008219: cell death	1.60E-02
70	GO:0044550: secondary metabolite biosynthetic process	1.63E-02
71	GO:0045454: cell redox homeostasis	1.80E-02
72	GO:0045087: innate immune response	1.89E-02
73	GO:0009637: response to blue light	1.89E-02
74	GO:0006869: lipid transport	1.98E-02
75	GO:0042742: defense response to bacterium	2.05E-02
76	GO:0016042: lipid catabolic process	2.16E-02
77	GO:0009408: response to heat	2.22E-02
78	GO:0008643: carbohydrate transport	2.39E-02
79	GO:0009846: pollen germination	2.66E-02
80	GO:0010224: response to UV-B	2.86E-02
81	GO:0009620: response to fungus	3.37E-02
82	GO:0042545: cell wall modification	3.52E-02
83	GO:0009845: seed germination	4.46E-02
84	GO:0009790: embryo development	4.70E-02
85	GO:0007275: multicellular organism development	4.74E-02
86	GO:0055085: transmembrane transport	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
3	GO:0031418: L-ascorbic acid binding	1.02E-05
4	GO:0004656: procollagen-proline 4-dioxygenase activity	3.34E-05
5	GO:0008142: oxysterol binding	7.46E-05
6	GO:0004630: phospholipase D activity	7.46E-05
7	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.46E-05
8	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.02E-04
9	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.02E-04
10	GO:0016920: pyroglutamyl-peptidase activity	1.02E-04
11	GO:0015036: disulfide oxidoreductase activity	2.40E-04
12	GO:0032934: sterol binding	2.40E-04
13	GO:0005457: GDP-fucose transmembrane transporter activity	3.99E-04
14	GO:0010178: IAA-amino acid conjugate hydrolase activity	5.73E-04
15	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.85E-03
16	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.45E-03
17	GO:0004864: protein phosphatase inhibitor activity	3.05E-03
18	GO:0004722: protein serine/threonine phosphatase activity	3.49E-03
19	GO:0015266: protein channel activity	4.02E-03
20	GO:0031072: heat shock protein binding	4.02E-03
21	GO:0005262: calcium channel activity	4.02E-03
22	GO:0005509: calcium ion binding	4.35E-03
23	GO:0008061: chitin binding	4.72E-03
24	GO:0003712: transcription cofactor activity	4.72E-03
25	GO:0005506: iron ion binding	4.79E-03
26	GO:0035251: UDP-glucosyltransferase activity	6.24E-03
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.28E-03
28	GO:0015297: antiporter activity	7.45E-03
29	GO:0003756: protein disulfide isomerase activity	7.48E-03
30	GO:0003743: translation initiation factor activity	9.12E-03
31	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.93E-03
32	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.12E-02
33	GO:0008237: metallopeptidase activity	1.22E-02
34	GO:0008483: transaminase activity	1.22E-02
35	GO:0008375: acetylglucosaminyltransferase activity	1.43E-02
36	GO:0030247: polysaccharide binding	1.48E-02
37	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.60E-02
38	GO:0015238: drug transmembrane transporter activity	1.65E-02
39	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.95E-02
40	GO:0005215: transporter activity	2.33E-02
41	GO:0035091: phosphatidylinositol binding	2.39E-02
42	GO:0045330: aspartyl esterase activity	3.01E-02
43	GO:0004842: ubiquitin-protein transferase activity	3.07E-02
44	GO:0016874: ligase activity	3.44E-02
45	GO:0030599: pectinesterase activity	3.44E-02
46	GO:0051082: unfolded protein binding	3.59E-02
47	GO:0015035: protein disulfide oxidoreductase activity	3.67E-02
48	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.30E-02
49	GO:0030170: pyridoxal phosphate binding	4.54E-02
50	GO:0015144: carbohydrate transmembrane transporter activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0031314: extrinsic component of mitochondrial inner membrane	2.40E-04
3	GO:0005789: endoplasmic reticulum membrane	5.82E-04
4	GO:0005743: mitochondrial inner membrane	6.39E-04
5	GO:0005623: cell	7.59E-04
6	GO:0000164: protein phosphatase type 1 complex	9.62E-04
7	GO:0031305: integral component of mitochondrial inner membrane	1.90E-03
8	GO:0005783: endoplasmic reticulum	3.86E-03
9	GO:0016021: integral component of membrane	4.43E-03
10	GO:0030176: integral component of endoplasmic reticulum membrane	4.72E-03
11	GO:0005795: Golgi stack	4.72E-03
12	GO:0031410: cytoplasmic vesicle	6.64E-03
13	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.48E-03
14	GO:0071944: cell periphery	1.12E-02
15	GO:0022625: cytosolic large ribosomal subunit	1.58E-02
16	GO:0000151: ubiquitin ligase complex	1.60E-02
17	GO:0005622: intracellular	1.74E-02
18	GO:0000325: plant-type vacuole	1.77E-02
19	GO:0005794: Golgi apparatus	2.83E-02
20	GO:0005635: nuclear envelope	2.94E-02
21	GO:0000139: Golgi membrane	2.99E-02
22	GO:0016020: membrane	3.05E-02
23	GO:0005774: vacuolar membrane	3.16E-02
24	GO:0009706: chloroplast inner membrane	3.59E-02
25	GO:0009543: chloroplast thylakoid lumen	4.22E-02