co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
2	GO:1900367: positive regulation of defense response to insect	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
5	GO:0033587: shikimate biosynthetic process	0.00E+00
6	GO:0032491: detection of molecule of fungal origin	0.00E+00
7	GO:0032499: detection of peptidoglycan	0.00E+00
8	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
9	GO:0071327: cellular response to trehalose stimulus	0.00E+00
10	GO:0006468: protein phosphorylation	6.86E-06
11	GO:0010200: response to chitin	1.95E-05
12	GO:0042742: defense response to bacterium	4.24E-05
13	GO:0033358: UDP-L-arabinose biosynthetic process	1.09E-04
14	GO:0060548: negative regulation of cell death	1.09E-04
15	GO:0045227: capsule polysaccharide biosynthetic process	1.09E-04
16	GO:0006904: vesicle docking involved in exocytosis	1.25E-04
17	GO:0046777: protein autophosphorylation	1.38E-04
18	GO:0002238: response to molecule of fungal origin	2.39E-04
19	GO:0009751: response to salicylic acid	2.99E-04
20	GO:0031930: mitochondria-nucleus signaling pathway	3.21E-04
21	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.48E-04
22	GO:0031348: negative regulation of defense response	3.48E-04
23	GO:0010365: positive regulation of ethylene biosynthetic process	4.32E-04
24	GO:0019567: arabinose biosynthetic process	4.32E-04
25	GO:0015969: guanosine tetraphosphate metabolic process	4.32E-04
26	GO:0051180: vitamin transport	4.32E-04
27	GO:0030974: thiamine pyrophosphate transport	4.32E-04
28	GO:1901183: positive regulation of camalexin biosynthetic process	4.32E-04
29	GO:0042759: long-chain fatty acid biosynthetic process	4.32E-04
30	GO:0010204: defense response signaling pathway, resistance gene-independent	6.32E-04
31	GO:0010150: leaf senescence	7.25E-04
32	GO:0010112: regulation of systemic acquired resistance	7.56E-04
33	GO:0006486: protein glycosylation	8.47E-04
34	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.92E-04
35	GO:1900426: positive regulation of defense response to bacterium	8.92E-04
36	GO:0006470: protein dephosphorylation	9.17E-04
37	GO:0002240: response to molecule of oomycetes origin	9.33E-04
38	GO:0010115: regulation of abscisic acid biosynthetic process	9.33E-04
39	GO:0031349: positive regulation of defense response	9.33E-04
40	GO:0015893: drug transport	9.33E-04
41	GO:0043066: negative regulation of apoptotic process	9.33E-04
42	GO:0015865: purine nucleotide transport	9.33E-04
43	GO:0045732: positive regulation of protein catabolic process	9.33E-04
44	GO:0010271: regulation of chlorophyll catabolic process	9.33E-04
45	GO:0046939: nucleotide phosphorylation	9.33E-04
46	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.33E-04
47	GO:0080185: effector dependent induction by symbiont of host immune response	9.33E-04
48	GO:0010618: aerenchyma formation	9.33E-04
49	GO:1902066: regulation of cell wall pectin metabolic process	9.33E-04
50	GO:0009626: plant-type hypersensitive response	1.20E-03
51	GO:0009620: response to fungus	1.25E-03
52	GO:0035556: intracellular signal transduction	1.27E-03
53	GO:0018105: peptidyl-serine phosphorylation	1.51E-03
54	GO:0010498: proteasomal protein catabolic process	1.52E-03
55	GO:0048586: regulation of long-day photoperiodism, flowering	1.52E-03
56	GO:0032922: circadian regulation of gene expression	1.52E-03
57	GO:0006954: inflammatory response	1.52E-03
58	GO:1901672: positive regulation of systemic acquired resistance	1.52E-03
59	GO:0034051: negative regulation of plant-type hypersensitive response	1.52E-03
60	GO:0016045: detection of bacterium	1.52E-03
61	GO:1900140: regulation of seedling development	1.52E-03
62	GO:0010359: regulation of anion channel activity	1.52E-03
63	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.52E-03
64	GO:0051176: positive regulation of sulfur metabolic process	1.52E-03
65	GO:0045836: positive regulation of meiotic nuclear division	1.52E-03
66	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.52E-03
67	GO:2000028: regulation of photoperiodism, flowering	1.55E-03
68	GO:0034605: cellular response to heat	1.75E-03
69	GO:0007034: vacuolar transport	1.75E-03
70	GO:0006499: N-terminal protein myristoylation	1.94E-03
71	GO:0009225: nucleotide-sugar metabolic process	1.96E-03
72	GO:0010167: response to nitrate	1.96E-03
73	GO:0046902: regulation of mitochondrial membrane permeability	2.19E-03
74	GO:0010104: regulation of ethylene-activated signaling pathway	2.19E-03
75	GO:0072583: clathrin-dependent endocytosis	2.19E-03
76	GO:0010731: protein glutathionylation	2.19E-03
77	GO:0071323: cellular response to chitin	2.19E-03
78	GO:0046513: ceramide biosynthetic process	2.19E-03
79	GO:0046836: glycolipid transport	2.19E-03
80	GO:0000187: activation of MAPK activity	2.19E-03
81	GO:0009863: salicylic acid mediated signaling pathway	2.42E-03
82	GO:0006887: exocytosis	2.89E-03
83	GO:0071219: cellular response to molecule of bacterial origin	2.95E-03
84	GO:0010508: positive regulation of autophagy	2.95E-03
85	GO:0080142: regulation of salicylic acid biosynthetic process	2.95E-03
86	GO:0051707: response to other organism	3.21E-03
87	GO:0010017: red or far-red light signaling pathway	3.22E-03
88	GO:0016226: iron-sulfur cluster assembly	3.22E-03
89	GO:0006012: galactose metabolic process	3.51E-03
90	GO:0018344: protein geranylgeranylation	3.78E-03
91	GO:0010225: response to UV-C	3.78E-03
92	GO:0009247: glycolipid biosynthetic process	3.78E-03
93	GO:0045927: positive regulation of growth	3.78E-03
94	GO:0009697: salicylic acid biosynthetic process	3.78E-03
95	GO:0006855: drug transmembrane transport	3.91E-03
96	GO:0009737: response to abscisic acid	4.18E-03
97	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.68E-03
98	GO:0010337: regulation of salicylic acid metabolic process	4.68E-03
99	GO:0010942: positive regulation of cell death	4.68E-03
100	GO:0010405: arabinogalactan protein metabolic process	4.68E-03
101	GO:0071470: cellular response to osmotic stress	5.64E-03
102	GO:0045926: negative regulation of growth	5.64E-03
103	GO:0009423: chorismate biosynthetic process	5.64E-03
104	GO:2000037: regulation of stomatal complex patterning	5.64E-03
105	GO:0010310: regulation of hydrogen peroxide metabolic process	5.64E-03
106	GO:0007264: small GTPase mediated signal transduction	6.38E-03
107	GO:1900056: negative regulation of leaf senescence	6.67E-03
108	GO:0070370: cellular heat acclimation	6.67E-03
109	GO:1900057: positive regulation of leaf senescence	6.67E-03
110	GO:0009624: response to nematode	7.38E-03
111	GO:0010928: regulation of auxin mediated signaling pathway	7.76E-03
112	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.76E-03
113	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.76E-03
114	GO:0030162: regulation of proteolysis	7.76E-03
115	GO:0006491: N-glycan processing	7.76E-03
116	GO:0019375: galactolipid biosynthetic process	7.76E-03
117	GO:0045010: actin nucleation	7.76E-03
118	GO:2000031: regulation of salicylic acid mediated signaling pathway	8.91E-03
119	GO:0010208: pollen wall assembly	8.91E-03
120	GO:0010099: regulation of photomorphogenesis	8.91E-03
121	GO:0009932: cell tip growth	8.91E-03
122	GO:0009816: defense response to bacterium, incompatible interaction	9.15E-03
123	GO:0006952: defense response	9.59E-03
124	GO:0009627: systemic acquired resistance	9.68E-03
125	GO:0006098: pentose-phosphate shunt	1.01E-02
126	GO:0046916: cellular transition metal ion homeostasis	1.01E-02
127	GO:0006950: response to stress	1.02E-02
128	GO:0009817: defense response to fungus, incompatible interaction	1.13E-02
129	GO:0048268: clathrin coat assembly	1.14E-02
130	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.14E-02
131	GO:0010380: regulation of chlorophyll biosynthetic process	1.14E-02
132	GO:0045892: negative regulation of transcription, DNA-templated	1.21E-02
133	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.27E-02
134	GO:0006032: chitin catabolic process	1.27E-02
135	GO:0009611: response to wounding	1.28E-02
136	GO:0009089: lysine biosynthetic process via diaminopimelate	1.41E-02
137	GO:0015770: sucrose transport	1.41E-02
138	GO:0009073: aromatic amino acid family biosynthetic process	1.41E-02
139	GO:0009867: jasmonic acid mediated signaling pathway	1.44E-02
140	GO:0045087: innate immune response	1.44E-02
141	GO:0002213: defense response to insect	1.55E-02
142	GO:0015706: nitrate transport	1.55E-02
143	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.55E-02
144	GO:0008361: regulation of cell size	1.55E-02
145	GO:0006829: zinc II ion transport	1.70E-02
146	GO:0009785: blue light signaling pathway	1.70E-02
147	GO:0006626: protein targeting to mitochondrion	1.70E-02
148	GO:0010229: inflorescence development	1.70E-02
149	GO:0018107: peptidyl-threonine phosphorylation	1.70E-02
150	GO:0055046: microgametogenesis	1.70E-02
151	GO:0006897: endocytosis	1.71E-02
152	GO:0002237: response to molecule of bacterial origin	1.85E-02
153	GO:0009266: response to temperature stimulus	1.85E-02
154	GO:0055085: transmembrane transport	1.86E-02
155	GO:0009617: response to bacterium	1.86E-02
156	GO:0005985: sucrose metabolic process	2.01E-02
157	GO:0046688: response to copper ion	2.01E-02
158	GO:0046854: phosphatidylinositol phosphorylation	2.01E-02
159	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.25E-02
160	GO:0080147: root hair cell development	2.33E-02
161	GO:0045333: cellular respiration	2.33E-02
162	GO:0006487: protein N-linked glycosylation	2.33E-02
163	GO:0006812: cation transport	2.34E-02
164	GO:0009695: jasmonic acid biosynthetic process	2.50E-02
165	GO:0006825: copper ion transport	2.50E-02
166	GO:0009269: response to desiccation	2.68E-02
167	GO:0051321: meiotic cell cycle	2.68E-02
168	GO:0016998: cell wall macromolecule catabolic process	2.68E-02
169	GO:0006970: response to osmotic stress	2.83E-02
170	GO:0009814: defense response, incompatible interaction	2.85E-02
171	GO:0071456: cellular response to hypoxia	2.85E-02
172	GO:0009625: response to insect	3.04E-02
173	GO:0010227: floral organ abscission	3.04E-02
174	GO:0009561: megagametogenesis	3.22E-02
175	GO:0009306: protein secretion	3.22E-02
176	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.41E-02
177	GO:0009738: abscisic acid-activated signaling pathway	3.61E-02
178	GO:0042391: regulation of membrane potential	3.61E-02
179	GO:0006885: regulation of pH	3.81E-02
180	GO:0048544: recognition of pollen	4.01E-02
181	GO:0009749: response to glucose	4.21E-02
182	GO:0010193: response to ozone	4.42E-02
183	GO:0016032: viral process	4.63E-02
184	GO:0048235: pollen sperm cell differentiation	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
2	GO:0010290: chlorophyll catabolite transmembrane transporter activity	0.00E+00
3	GO:0005522: profilin binding	0.00E+00
4	GO:0015431: glutathione S-conjugate-exporting ATPase activity	0.00E+00
5	GO:0004107: chorismate synthase activity	0.00E+00
6	GO:0005212: structural constituent of eye lens	0.00E+00
7	GO:2001080: chitosan binding	0.00E+00
8	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
9	GO:0016301: kinase activity	1.27E-06
10	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.52E-06
11	GO:0004674: protein serine/threonine kinase activity	2.02E-05
12	GO:0005509: calcium ion binding	3.05E-05
13	GO:0005524: ATP binding	7.83E-05
14	GO:0008559: xenobiotic-transporting ATPase activity	8.14E-05
15	GO:0019199: transmembrane receptor protein kinase activity	1.09E-04
16	GO:0050373: UDP-arabinose 4-epimerase activity	1.09E-04
17	GO:0003978: UDP-glucose 4-epimerase activity	3.21E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	4.32E-04
19	GO:1901149: salicylic acid binding	4.32E-04
20	GO:0090422: thiamine pyrophosphate transporter activity	4.32E-04
21	GO:0004662: CAAX-protein geranylgeranyltransferase activity	4.32E-04
22	GO:0046481: digalactosyldiacylglycerol synthase activity	4.32E-04
23	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.32E-04
24	GO:0032050: clathrin heavy chain binding	4.32E-04
25	GO:0048531: beta-1,3-galactosyltransferase activity	9.33E-04
26	GO:0008728: GTP diphosphokinase activity	9.33E-04
27	GO:0050291: sphingosine N-acyltransferase activity	9.33E-04
28	GO:0004568: chitinase activity	1.04E-03
29	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.10E-03
30	GO:0008378: galactosyltransferase activity	1.36E-03
31	GO:0008375: acetylglucosaminyltransferase activity	1.41E-03
32	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.41E-03
33	GO:0004683: calmodulin-dependent protein kinase activity	1.50E-03
34	GO:0016531: copper chaperone activity	1.52E-03
35	GO:0046423: allene-oxide cyclase activity	1.52E-03
36	GO:0015238: drug transmembrane transporter activity	1.83E-03
37	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	2.19E-03
38	GO:0019201: nucleotide kinase activity	2.19E-03
39	GO:0035250: UDP-galactosyltransferase activity	2.19E-03
40	GO:0017089: glycolipid transporter activity	2.19E-03
41	GO:0043424: protein histidine kinase binding	2.68E-03
42	GO:0033612: receptor serine/threonine kinase binding	2.94E-03
43	GO:0009916: alternative oxidase activity	2.95E-03
44	GO:0051861: glycolipid binding	2.95E-03
45	GO:0005515: protein binding	3.03E-03
46	GO:0004722: protein serine/threonine phosphatase activity	3.69E-03
47	GO:0004040: amidase activity	3.78E-03
48	GO:0005471: ATP:ADP antiporter activity	3.78E-03
49	GO:0045431: flavonol synthase activity	3.78E-03
50	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.68E-03
51	GO:0004017: adenylate kinase activity	5.64E-03
52	GO:0003730: mRNA 3'-UTR binding	5.64E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	5.64E-03
54	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.64E-03
55	GO:0004559: alpha-mannosidase activity	5.64E-03
56	GO:0008506: sucrose:proton symporter activity	6.67E-03
57	GO:0004708: MAP kinase kinase activity	7.76E-03
58	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.76E-03
59	GO:0004430: 1-phosphatidylinositol 4-kinase activity	8.91E-03
60	GO:0071949: FAD binding	1.01E-02
61	GO:0004842: ubiquitin-protein transferase activity	1.06E-02
62	GO:0015112: nitrate transmembrane transporter activity	1.14E-02
63	GO:0004672: protein kinase activity	1.20E-02
64	GO:0008047: enzyme activator activity	1.27E-02
65	GO:0004713: protein tyrosine kinase activity	1.27E-02
66	GO:0005545: 1-phosphatidylinositol binding	1.27E-02
67	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.36E-02
68	GO:0015297: antiporter activity	1.40E-02
69	GO:0008515: sucrose transmembrane transporter activity	1.41E-02
70	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.70E-02
71	GO:0031072: heat shock protein binding	1.70E-02
72	GO:0005215: transporter activity	1.82E-02
73	GO:0030553: cGMP binding	2.01E-02
74	GO:0008061: chitin binding	2.01E-02
75	GO:0030552: cAMP binding	2.01E-02
76	GO:0031418: L-ascorbic acid binding	2.33E-02
77	GO:0003954: NADH dehydrogenase activity	2.33E-02
78	GO:0046872: metal ion binding	2.47E-02
79	GO:0005516: calmodulin binding	2.48E-02
80	GO:0005216: ion channel activity	2.50E-02
81	GO:0008324: cation transmembrane transporter activity	2.50E-02
82	GO:0051087: chaperone binding	2.50E-02
83	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.68E-02
84	GO:0031625: ubiquitin protein ligase binding	2.78E-02
85	GO:0005525: GTP binding	2.88E-02
86	GO:0030551: cyclic nucleotide binding	3.61E-02
87	GO:0005451: monovalent cation:proton antiporter activity	3.61E-02
88	GO:0005249: voltage-gated potassium channel activity	3.61E-02
89	GO:0046873: metal ion transmembrane transporter activity	3.81E-02
90	GO:0030276: clathrin binding	3.81E-02
91	GO:0015299: solute:proton antiporter activity	4.01E-02
92	GO:0010181: FMN binding	4.01E-02
93	GO:0019901: protein kinase binding	4.21E-02
94	GO:0004872: receptor activity	4.21E-02
95	GO:0016758: transferase activity, transferring hexosyl groups	4.34E-02
96	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.42E-02
97	GO:0015385: sodium:proton antiporter activity	4.85E-02
98	GO:0051015: actin filament binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.46E-08
2	GO:0005911: cell-cell junction	4.32E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	4.32E-04
4	GO:0000145: exocyst	8.38E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	9.33E-04
6	GO:0005901: caveola	9.33E-04
7	GO:0030139: endocytic vesicle	1.52E-03
8	GO:0016021: integral component of membrane	2.03E-03
9	GO:0000325: plant-type vacuole	2.06E-03
10	GO:0070062: extracellular exosome	2.19E-03
11	GO:0005758: mitochondrial intermembrane space	2.42E-03
12	GO:0000815: ESCRT III complex	5.64E-03
13	GO:0005794: Golgi apparatus	5.78E-03
14	GO:0032580: Golgi cisterna membrane	7.24E-03
15	GO:0005740: mitochondrial envelope	1.27E-02
16	GO:0030125: clathrin vesicle coat	1.27E-02
17	GO:0090404: pollen tube tip	1.41E-02
18	GO:0005795: Golgi stack	2.01E-02
19	GO:0070469: respiratory chain	2.50E-02
20	GO:0005905: clathrin-coated pit	2.68E-02
21	GO:0005774: vacuolar membrane	3.18E-02
22	GO:0030136: clathrin-coated vesicle	3.41E-02
23	GO:0012505: endomembrane system	3.47E-02
24	GO:0005770: late endosome	3.81E-02
25	GO:0005654: nucleoplasm	4.34E-02
26	GO:0005743: mitochondrial inner membrane	4.96E-02