GO Enrichment Analysis of Co-expressed Genes with
AT3G61060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 3 | GO:0005980: glycogen catabolic process | 6.26E-05 |
| 4 | GO:0010028: xanthophyll cycle | 6.26E-05 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 7.62E-05 |
| 6 | GO:0006898: receptor-mediated endocytosis | 1.52E-04 |
| 7 | GO:0016122: xanthophyll metabolic process | 1.52E-04 |
| 8 | GO:0006696: ergosterol biosynthetic process | 2.57E-04 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.73E-04 |
| 10 | GO:0045338: farnesyl diphosphate metabolic process | 3.73E-04 |
| 11 | GO:0055114: oxidation-reduction process | 3.81E-04 |
| 12 | GO:0019252: starch biosynthetic process | 3.99E-04 |
| 13 | GO:0071483: cellular response to blue light | 4.99E-04 |
| 14 | GO:0015994: chlorophyll metabolic process | 4.99E-04 |
| 15 | GO:0016126: sterol biosynthetic process | 6.12E-04 |
| 16 | GO:0016120: carotene biosynthetic process | 6.32E-04 |
| 17 | GO:0006656: phosphatidylcholine biosynthetic process | 6.32E-04 |
| 18 | GO:0009904: chloroplast accumulation movement | 6.32E-04 |
| 19 | GO:1902456: regulation of stomatal opening | 7.73E-04 |
| 20 | GO:0009643: photosynthetic acclimation | 7.73E-04 |
| 21 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.73E-04 |
| 22 | GO:0009903: chloroplast avoidance movement | 9.20E-04 |
| 23 | GO:0071333: cellular response to glucose stimulus | 9.20E-04 |
| 24 | GO:0034599: cellular response to oxidative stress | 1.03E-03 |
| 25 | GO:1900056: negative regulation of leaf senescence | 1.07E-03 |
| 26 | GO:0010196: nonphotochemical quenching | 1.07E-03 |
| 27 | GO:0070413: trehalose metabolism in response to stress | 1.24E-03 |
| 28 | GO:0015996: chlorophyll catabolic process | 1.41E-03 |
| 29 | GO:0009821: alkaloid biosynthetic process | 1.58E-03 |
| 30 | GO:0006098: pentose-phosphate shunt | 1.58E-03 |
| 31 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.77E-03 |
| 32 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.77E-03 |
| 33 | GO:0005982: starch metabolic process | 1.77E-03 |
| 34 | GO:0009641: shade avoidance | 1.96E-03 |
| 35 | GO:0072593: reactive oxygen species metabolic process | 2.17E-03 |
| 36 | GO:0006094: gluconeogenesis | 2.58E-03 |
| 37 | GO:0010207: photosystem II assembly | 2.80E-03 |
| 38 | GO:0007015: actin filament organization | 2.80E-03 |
| 39 | GO:0010223: secondary shoot formation | 2.80E-03 |
| 40 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.26E-03 |
| 41 | GO:0005992: trehalose biosynthetic process | 3.49E-03 |
| 42 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.24E-03 |
| 43 | GO:0071215: cellular response to abscisic acid stimulus | 4.50E-03 |
| 44 | GO:0016117: carotenoid biosynthetic process | 5.03E-03 |
| 45 | GO:0006662: glycerol ether metabolic process | 5.59E-03 |
| 46 | GO:0032502: developmental process | 6.76E-03 |
| 47 | GO:0009630: gravitropism | 6.76E-03 |
| 48 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 8.04E-03 |
| 49 | GO:0001666: response to hypoxia | 8.35E-03 |
| 50 | GO:0045454: cell redox homeostasis | 9.31E-03 |
| 51 | GO:0009813: flavonoid biosynthetic process | 1.04E-02 |
| 52 | GO:0009910: negative regulation of flower development | 1.11E-02 |
| 53 | GO:0009408: response to heat | 1.15E-02 |
| 54 | GO:0006631: fatty acid metabolic process | 1.34E-02 |
| 55 | GO:0010114: response to red light | 1.42E-02 |
| 56 | GO:0000209: protein polyubiquitination | 1.46E-02 |
| 57 | GO:0046686: response to cadmium ion | 1.56E-02 |
| 58 | GO:0006364: rRNA processing | 1.75E-02 |
| 59 | GO:0006813: potassium ion transport | 1.75E-02 |
| 60 | GO:0010224: response to UV-B | 1.80E-02 |
| 61 | GO:0006096: glycolytic process | 1.98E-02 |
| 62 | GO:0009626: plant-type hypersensitive response | 2.07E-02 |
| 63 | GO:0045893: positive regulation of transcription, DNA-templated | 2.35E-02 |
| 64 | GO:0006457: protein folding | 2.65E-02 |
| 65 | GO:0009058: biosynthetic process | 2.75E-02 |
| 66 | GO:0010150: leaf senescence | 3.33E-02 |
| 67 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.44E-02 |
| 68 | GO:0009739: response to gibberellin | 3.60E-02 |
| 69 | GO:0009617: response to bacterium | 3.77E-02 |
| 70 | GO:0009658: chloroplast organization | 4.54E-02 |
| 71 | GO:0042254: ribosome biogenesis | 4.60E-02 |
| 72 | GO:0009733: response to auxin | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016166: phytoene dehydrogenase activity | 0.00E+00 |
| 2 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 3 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 6 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 7 | GO:0004373: glycogen (starch) synthase activity | 8.71E-07 |
| 8 | GO:0009011: starch synthase activity | 4.03E-06 |
| 9 | GO:0004645: phosphorylase activity | 6.26E-05 |
| 10 | GO:0034256: chlorophyll(ide) b reductase activity | 6.26E-05 |
| 11 | GO:0045486: naringenin 3-dioxygenase activity | 6.26E-05 |
| 12 | GO:0035671: enone reductase activity | 6.26E-05 |
| 13 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 6.26E-05 |
| 14 | GO:0008184: glycogen phosphorylase activity | 6.26E-05 |
| 15 | GO:0019172: glyoxalase III activity | 1.52E-04 |
| 16 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.52E-04 |
| 17 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.52E-04 |
| 18 | GO:0033201: alpha-1,4-glucan synthase activity | 1.52E-04 |
| 19 | GO:0022890: inorganic cation transmembrane transporter activity | 3.73E-04 |
| 20 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.99E-04 |
| 21 | GO:0004462: lactoylglutathione lyase activity | 7.73E-04 |
| 22 | GO:0004332: fructose-bisphosphate aldolase activity | 7.73E-04 |
| 23 | GO:0071949: FAD binding | 1.58E-03 |
| 24 | GO:0016844: strictosidine synthase activity | 1.77E-03 |
| 25 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.77E-03 |
| 26 | GO:0015386: potassium:proton antiporter activity | 2.17E-03 |
| 27 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.58E-03 |
| 28 | GO:0031072: heat shock protein binding | 2.58E-03 |
| 29 | GO:0031418: L-ascorbic acid binding | 3.49E-03 |
| 30 | GO:0015079: potassium ion transmembrane transporter activity | 3.74E-03 |
| 31 | GO:0003756: protein disulfide isomerase activity | 4.76E-03 |
| 32 | GO:0047134: protein-disulfide reductase activity | 5.03E-03 |
| 33 | GO:0004791: thioredoxin-disulfide reductase activity | 5.88E-03 |
| 34 | GO:0015299: solute:proton antiporter activity | 5.88E-03 |
| 35 | GO:0048038: quinone binding | 6.46E-03 |
| 36 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.07E-03 |
| 37 | GO:0016791: phosphatase activity | 7.38E-03 |
| 38 | GO:0016757: transferase activity, transferring glycosyl groups | 1.15E-02 |
| 39 | GO:0003746: translation elongation factor activity | 1.19E-02 |
| 40 | GO:0003993: acid phosphatase activity | 1.23E-02 |
| 41 | GO:0016491: oxidoreductase activity | 1.26E-02 |
| 42 | GO:0031625: ubiquitin protein ligase binding | 1.89E-02 |
| 43 | GO:0051082: unfolded protein binding | 2.25E-02 |
| 44 | GO:0015035: protein disulfide oxidoreductase activity | 2.30E-02 |
| 45 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.70E-02 |
| 46 | GO:0030170: pyridoxal phosphate binding | 2.85E-02 |
| 47 | GO:0004252: serine-type endopeptidase activity | 2.85E-02 |
| 48 | GO:0003743: translation initiation factor activity | 3.72E-02 |
| 49 | GO:0042802: identical protein binding | 3.95E-02 |
| 50 | GO:0005506: iron ion binding | 4.07E-02 |
| 51 | GO:0046982: protein heterodimerization activity | 4.48E-02 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.34E-10 |
| 2 | GO:0009534: chloroplast thylakoid | 1.93E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 5.96E-07 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.35E-05 |
| 5 | GO:0031977: thylakoid lumen | 8.32E-05 |
| 6 | GO:0009569: chloroplast starch grain | 1.52E-04 |
| 7 | GO:0042651: thylakoid membrane | 1.88E-04 |
| 8 | GO:0009509: chromoplast | 2.57E-04 |
| 9 | GO:0009941: chloroplast envelope | 3.66E-04 |
| 10 | GO:0031982: vesicle | 1.24E-03 |
| 11 | GO:0009501: amyloplast | 1.24E-03 |
| 12 | GO:0009570: chloroplast stroma | 2.74E-03 |
| 13 | GO:0030095: chloroplast photosystem II | 2.80E-03 |
| 14 | GO:0010287: plastoglobule | 2.80E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 2.96E-03 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 3.74E-03 |
| 17 | GO:0009579: thylakoid | 4.56E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 6.17E-03 |
| 19 | GO:0010319: stromule | 7.70E-03 |
| 20 | GO:0031969: chloroplast membrane | 7.77E-03 |
| 21 | GO:0005623: cell | 2.70E-02 |
| 22 | GO:0048046: apoplast | 4.49E-02 |