Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042794: rRNA transcription from plastid promoter0.00E+00
2GO:0070455: positive regulation of heme biosynthetic process0.00E+00
3GO:0042793: transcription from plastid promoter3.13E-07
4GO:0010070: zygote asymmetric cell division7.41E-06
5GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic7.41E-06
6GO:0010069: zygote asymmetric cytokinesis in embryo sac2.00E-05
7GO:0042780: tRNA 3'-end processing3.67E-05
8GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic3.67E-05
9GO:0006518: peptide metabolic process3.67E-05
10GO:0033014: tetrapyrrole biosynthetic process5.65E-05
11GO:0010190: cytochrome b6f complex assembly1.30E-04
12GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.88E-04
13GO:0042255: ribosome assembly2.20E-04
14GO:0006353: DNA-templated transcription, termination2.20E-04
15GO:0007186: G-protein coupled receptor signaling pathway2.52E-04
16GO:0006783: heme biosynthetic process2.85E-04
17GO:0009767: photosynthetic electron transport chain4.64E-04
18GO:0010588: cotyledon vascular tissue pattern formation4.64E-04
19GO:0006874: cellular calcium ion homeostasis6.61E-04
20GO:0009791: post-embryonic development1.06E-03
21GO:0032502: developmental process1.15E-03
22GO:0015995: chlorophyll biosynthetic process1.56E-03
23GO:0006811: ion transport1.78E-03
24GO:0006364: rRNA processing2.82E-03
25GO:0048316: seed development3.23E-03
26GO:0009790: embryo development4.64E-03
27GO:0009451: RNA modification5.29E-03
28GO:0008380: RNA splicing5.88E-03
29GO:0009658: chloroplast organization7.04E-03
30GO:0042254: ribosome biogenesis7.13E-03
31GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.37E-03
32GO:0046777: protein autophosphorylation8.57E-03
33GO:0008152: metabolic process1.15E-02
34GO:0009416: response to light stimulus1.61E-02
35GO:0009611: response to wounding1.64E-02
36GO:0045893: positive regulation of transcription, DNA-templated1.78E-02
37GO:0009793: embryo development ending in seed dormancy4.85E-02
RankGO TermAdjusted P value
1GO:0042781: 3'-tRNA processing endoribonuclease activity3.67E-05
2GO:0043495: protein anchor7.90E-05
3GO:0004930: G-protein coupled receptor activity7.90E-05
4GO:0004970: ionotropic glutamate receptor activity5.40E-04
5GO:0005217: intracellular ligand-gated ion channel activity5.40E-04
6GO:0003727: single-stranded RNA binding8.32E-04
7GO:0010181: FMN binding1.01E-03
8GO:0004222: metalloendopeptidase activity1.78E-03
9GO:0003690: double-stranded DNA binding2.89E-03
10GO:0008026: ATP-dependent helicase activity3.73E-03
11GO:0019843: rRNA binding4.18E-03
12GO:0004519: endonuclease activity1.14E-02
13GO:0003723: RNA binding2.26E-02
14GO:0003824: catalytic activity2.85E-02
15GO:0016491: oxidoreductase activity3.25E-02
16GO:0046983: protein dimerization activity3.28E-02
17GO:0016787: hydrolase activity4.59E-02
RankGO TermAdjusted P value
1GO:0042644: chloroplast nucleoid2.85E-04
2GO:0009508: plastid chromosome4.64E-04
3GO:0043234: protein complex5.80E-04
4GO:0009507: chloroplast7.14E-04
5GO:0009295: nucleoid1.30E-03
6GO:0090406: pollen tube2.31E-03
7GO:0009536: plastid3.54E-03
8GO:0005739: mitochondrion1.67E-02
9GO:0009534: chloroplast thylakoid1.84E-02
10GO:0009570: chloroplast stroma1.90E-02
11GO:0009505: plant-type cell wall3.13E-02
12GO:0009535: chloroplast thylakoid membrane4.74E-02
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Gene type



Gene DE type