co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
5	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
6	GO:0051493: regulation of cytoskeleton organization	0.00E+00
7	GO:0044154: histone H3-K14 acetylation	0.00E+00
8	GO:0046460: neutral lipid biosynthetic process	0.00E+00
9	GO:0048657: anther wall tapetum cell differentiation	9.50E-05
10	GO:1990542: mitochondrial transmembrane transport	9.50E-05
11	GO:0051171: regulation of nitrogen compound metabolic process	9.50E-05
12	GO:1902265: abscisic acid homeostasis	9.50E-05
13	GO:0043971: histone H3-K18 acetylation	9.50E-05
14	GO:1901135: carbohydrate derivative metabolic process	9.50E-05
15	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.00E-04
16	GO:0010192: mucilage biosynthetic process	1.20E-04
17	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	2.24E-04
18	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.24E-04
19	GO:0048255: mRNA stabilization	2.24E-04
20	GO:0006898: receptor-mediated endocytosis	2.24E-04
21	GO:0043622: cortical microtubule organization	3.32E-04
22	GO:0001578: microtubule bundle formation	3.73E-04
23	GO:0031022: nuclear migration along microfilament	3.73E-04
24	GO:0006013: mannose metabolic process	3.73E-04
25	GO:0010255: glucose mediated signaling pathway	5.37E-04
26	GO:0006168: adenine salvage	5.37E-04
27	GO:0006166: purine ribonucleoside salvage	5.37E-04
28	GO:0009902: chloroplast relocation	7.14E-04
29	GO:0051322: anaphase	7.14E-04
30	GO:0007020: microtubule nucleation	7.14E-04
31	GO:0046785: microtubule polymerization	9.02E-04
32	GO:0044209: AMP salvage	9.02E-04
33	GO:0010315: auxin efflux	1.10E-03
34	GO:0009903: chloroplast avoidance movement	1.31E-03
35	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.31E-03
36	GO:0034389: lipid particle organization	1.31E-03
37	GO:0030244: cellulose biosynthetic process	1.33E-03
38	GO:0048528: post-embryonic root development	1.54E-03
39	GO:0009826: unidimensional cell growth	1.58E-03
40	GO:0007155: cell adhesion	1.78E-03
41	GO:0010928: regulation of auxin mediated signaling pathway	1.78E-03
42	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.78E-03
43	GO:0006353: DNA-templated transcription, termination	1.78E-03
44	GO:0005975: carbohydrate metabolic process	1.96E-03
45	GO:0006997: nucleus organization	2.03E-03
46	GO:0007389: pattern specification process	2.03E-03
47	GO:0044030: regulation of DNA methylation	2.03E-03
48	GO:0006002: fructose 6-phosphate metabolic process	2.03E-03
49	GO:0009051: pentose-phosphate shunt, oxidative branch	2.29E-03
50	GO:0019432: triglyceride biosynthetic process	2.29E-03
51	GO:0010380: regulation of chlorophyll biosynthetic process	2.56E-03
52	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.44E-03
53	GO:0030048: actin filament-based movement	3.76E-03
54	GO:0009825: multidimensional cell growth	4.41E-03
55	GO:0080188: RNA-directed DNA methylation	4.41E-03
56	GO:0009833: plant-type primary cell wall biogenesis	4.75E-03
57	GO:0006071: glycerol metabolic process	4.75E-03
58	GO:0000162: tryptophan biosynthetic process	4.75E-03
59	GO:0010187: negative regulation of seed germination	5.10E-03
60	GO:0010073: meristem maintenance	5.46E-03
61	GO:0009734: auxin-activated signaling pathway	5.49E-03
62	GO:0009693: ethylene biosynthetic process	6.58E-03
63	GO:0006508: proteolysis	6.71E-03
64	GO:0010584: pollen exine formation	6.98E-03
65	GO:0009738: abscisic acid-activated signaling pathway	7.06E-03
66	GO:0007623: circadian rhythm	7.06E-03
67	GO:0048868: pollen tube development	8.21E-03
68	GO:0010268: brassinosteroid homeostasis	8.21E-03
69	GO:0008360: regulation of cell shape	8.21E-03
70	GO:0009958: positive gravitropism	8.21E-03
71	GO:0009851: auxin biosynthetic process	9.06E-03
72	GO:0016132: brassinosteroid biosynthetic process	9.51E-03
73	GO:0007264: small GTPase mediated signal transduction	9.96E-03
74	GO:0010583: response to cyclopentenone	9.96E-03
75	GO:0016125: sterol metabolic process	1.09E-02
76	GO:0010252: auxin homeostasis	1.09E-02
77	GO:0000910: cytokinesis	1.18E-02
78	GO:0016126: sterol biosynthetic process	1.23E-02
79	GO:0009911: positive regulation of flower development	1.23E-02
80	GO:0010029: regulation of seed germination	1.28E-02
81	GO:0016049: cell growth	1.43E-02
82	GO:0008219: cell death	1.49E-02
83	GO:0009832: plant-type cell wall biogenesis	1.54E-02
84	GO:0009834: plant-type secondary cell wall biogenesis	1.59E-02
85	GO:0006811: ion transport	1.59E-02
86	GO:0009910: negative regulation of flower development	1.65E-02
87	GO:0009637: response to blue light	1.76E-02
88	GO:0009853: photorespiration	1.76E-02
89	GO:0071555: cell wall organization	1.80E-02
90	GO:0006952: defense response	1.86E-02
91	GO:0016042: lipid catabolic process	1.95E-02
92	GO:0009926: auxin polar transport	2.10E-02
93	GO:0051707: response to other organism	2.10E-02
94	GO:0008283: cell proliferation	2.10E-02
95	GO:0009664: plant-type cell wall organization	2.47E-02
96	GO:0051603: proteolysis involved in cellular protein catabolic process	2.67E-02
97	GO:0010224: response to UV-B	2.67E-02
98	GO:0006096: glycolytic process	2.93E-02
99	GO:0009740: gibberellic acid mediated signaling pathway	3.20E-02
100	GO:0006468: protein phosphorylation	3.25E-02
101	GO:0009553: embryo sac development	3.27E-02
102	GO:0051726: regulation of cell cycle	3.49E-02
103	GO:0009416: response to light stimulus	3.56E-02
104	GO:0009790: embryo development	4.38E-02
105	GO:0055085: transmembrane transport	4.51E-02
106	GO:0006457: protein folding	4.59E-02
107	GO:0006633: fatty acid biosynthetic process	4.61E-02
108	GO:0040008: regulation of growth	4.77E-02
109	GO:0010150: leaf senescence	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0017091: AU-rich element binding	9.50E-05
3	GO:0097367: carbohydrate derivative binding	9.50E-05
4	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.24E-04
5	GO:0015929: hexosaminidase activity	2.24E-04
6	GO:0004563: beta-N-acetylhexosaminidase activity	2.24E-04
7	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.24E-04
8	GO:0032549: ribonucleoside binding	3.73E-04
9	GO:0016805: dipeptidase activity	3.73E-04
10	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.73E-04
11	GO:0003999: adenine phosphoribosyltransferase activity	5.37E-04
12	GO:0017057: 6-phosphogluconolactonase activity	5.37E-04
13	GO:0017077: oxidative phosphorylation uncoupler activity	5.37E-04
14	GO:0000254: C-4 methylsterol oxidase activity	5.37E-04
15	GO:0008080: N-acetyltransferase activity	5.95E-04
16	GO:0080032: methyl jasmonate esterase activity	7.14E-04
17	GO:0010385: double-stranded methylated DNA binding	7.14E-04
18	GO:0004721: phosphoprotein phosphatase activity	1.21E-03
19	GO:0004144: diacylglycerol O-acyltransferase activity	1.31E-03
20	GO:0004559: alpha-mannosidase activity	1.31E-03
21	GO:0003872: 6-phosphofructokinase activity	1.54E-03
22	GO:0016788: hydrolase activity, acting on ester bonds	1.70E-03
23	GO:0052689: carboxylic ester hydrolase activity	2.47E-03
24	GO:0009672: auxin:proton symporter activity	2.56E-03
25	GO:0015020: glucuronosyltransferase activity	2.85E-03
26	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.14E-03
27	GO:0001054: RNA polymerase I activity	3.14E-03
28	GO:0010329: auxin efflux transmembrane transporter activity	3.76E-03
29	GO:0022857: transmembrane transporter activity	3.86E-03
30	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.08E-03
31	GO:0004176: ATP-dependent peptidase activity	5.83E-03
32	GO:0035251: UDP-glucosyltransferase activity	5.83E-03
33	GO:0016760: cellulose synthase (UDP-forming) activity	6.58E-03
34	GO:0004402: histone acetyltransferase activity	7.79E-03
35	GO:0016757: transferase activity, transferring glycosyl groups	8.02E-03
36	GO:0001085: RNA polymerase II transcription factor binding	8.21E-03
37	GO:0016853: isomerase activity	8.63E-03
38	GO:0019901: protein kinase binding	9.06E-03
39	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.05E-02
40	GO:0030246: carbohydrate binding	1.07E-02
41	GO:0016759: cellulose synthase activity	1.09E-02
42	GO:0008237: metallopeptidase activity	1.14E-02
43	GO:0004806: triglyceride lipase activity	1.38E-02
44	GO:0030247: polysaccharide binding	1.38E-02
45	GO:0004674: protein serine/threonine kinase activity	1.52E-02
46	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.59E-02
47	GO:0004222: metalloendopeptidase activity	1.59E-02
48	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.65E-02
49	GO:0004722: protein serine/threonine phosphatase activity	1.79E-02
50	GO:0042393: histone binding	1.93E-02
51	GO:0004185: serine-type carboxypeptidase activity	2.10E-02
52	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.60E-02
53	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.14E-02
54	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.14E-02
55	GO:0016758: transferase activity, transferring hexosyl groups	3.85E-02
56	GO:0019843: rRNA binding	3.92E-02
57	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
58	GO:0004252: serine-type endopeptidase activity	4.23E-02
59	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.30E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0070971: endoplasmic reticulum exit site	0.00E+00
2	GO:0010005: cortical microtubule, transverse to long axis	2.96E-05
3	GO:0010330: cellulose synthase complex	3.73E-04
4	GO:0009897: external side of plasma membrane	3.73E-04
5	GO:0072686: mitotic spindle	9.02E-04
6	GO:0005945: 6-phosphofructokinase complex	9.02E-04
7	GO:0031982: vesicle	1.78E-03
8	GO:0005811: lipid particle	2.03E-03
9	GO:0005736: DNA-directed RNA polymerase I complex	2.29E-03
10	GO:0005886: plasma membrane	2.64E-03
11	GO:0055028: cortical microtubule	2.85E-03
12	GO:0009574: preprophase band	3.76E-03
13	GO:0005938: cell cortex	3.76E-03
14	GO:0045271: respiratory chain complex I	5.46E-03
15	GO:0009505: plant-type cell wall	5.93E-03
16	GO:0009507: chloroplast	6.30E-03
17	GO:0005789: endoplasmic reticulum membrane	8.00E-03
18	GO:0019898: extrinsic component of membrane	9.06E-03
19	GO:0031965: nuclear membrane	9.06E-03
20	GO:0005794: Golgi apparatus	9.06E-03
21	GO:0046658: anchored component of plasma membrane	9.35E-03
22	GO:0005667: transcription factor complex	1.33E-02
23	GO:0005802: trans-Golgi network	1.34E-02
24	GO:0009707: chloroplast outer membrane	1.49E-02
25	GO:0005768: endosome	1.58E-02
26	GO:0005819: spindle	1.87E-02
27	GO:0005856: cytoskeleton	2.29E-02
28	GO:0031966: mitochondrial membrane	2.47E-02
29	GO:0016021: integral component of membrane	2.70E-02
30	GO:0005774: vacuolar membrane	2.73E-02
31	GO:0005635: nuclear envelope	2.73E-02
32	GO:0005747: mitochondrial respiratory chain complex I	3.00E-02
33	GO:0005623: cell	4.00E-02
34	GO:0009524: phragmoplast	4.07E-02
35	GO:0009705: plant-type vacuole membrane	4.93E-02