Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048227: plasma membrane to endosome transport0.00E+00
2GO:0006721: terpenoid metabolic process0.00E+00
3GO:0016487: farnesol metabolic process1.21E-05
4GO:1900424: regulation of defense response to bacterium1.21E-05
5GO:0009866: induced systemic resistance, ethylene mediated signaling pathway3.21E-05
6GO:0080026: response to indolebutyric acid3.21E-05
7GO:0006101: citrate metabolic process3.21E-05
8GO:0010498: proteasomal protein catabolic process5.78E-05
9GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway5.78E-05
10GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.63E-05
11GO:0080024: indolebutyric acid metabolic process8.79E-05
12GO:0010483: pollen tube reception1.22E-04
13GO:0046686: response to cadmium ion1.31E-04
14GO:0018279: protein N-linked glycosylation via asparagine1.59E-04
15GO:0006097: glyoxylate cycle1.59E-04
16GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.98E-04
17GO:0009620: response to fungus2.95E-04
18GO:1900150: regulation of defense response to fungus3.27E-04
19GO:0006102: isocitrate metabolic process3.27E-04
20GO:2000031: regulation of salicylic acid mediated signaling pathway3.73E-04
21GO:0006511: ubiquitin-dependent protein catabolic process3.90E-04
22GO:0018107: peptidyl-threonine phosphorylation6.76E-04
23GO:0090351: seedling development7.88E-04
24GO:0006487: protein N-linked glycosylation9.02E-04
25GO:0015992: proton transport1.02E-03
26GO:0030433: ubiquitin-dependent ERAD pathway1.08E-03
27GO:0019748: secondary metabolic process1.08E-03
28GO:0046777: protein autophosphorylation1.09E-03
29GO:0010501: RNA secondary structure unwinding1.34E-03
30GO:0002229: defense response to oomycetes1.61E-03
31GO:0007264: small GTPase mediated signal transduction1.68E-03
32GO:0006914: autophagy1.83E-03
33GO:0009615: response to virus2.06E-03
34GO:0009627: systemic acquired resistance2.22E-03
35GO:0009817: defense response to fungus, incompatible interaction2.46E-03
36GO:0008219: cell death2.46E-03
37GO:0048767: root hair elongation2.55E-03
38GO:0006099: tricarboxylic acid cycle2.97E-03
39GO:0006631: fatty acid metabolic process3.24E-03
40GO:0031347: regulation of defense response3.90E-03
41GO:0000165: MAPK cascade3.90E-03
42GO:0051603: proteolysis involved in cellular protein catabolic process4.30E-03
43GO:0009553: embryo sac development5.23E-03
44GO:0018105: peptidyl-serine phosphorylation5.45E-03
45GO:0015031: protein transport6.62E-03
46GO:0006413: translational initiation7.42E-03
47GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.43E-03
48GO:0010468: regulation of gene expression8.82E-03
49GO:0009617: response to bacterium8.82E-03
50GO:0009723: response to ethylene1.17E-02
51GO:0045892: negative regulation of transcription, DNA-templated1.41E-02
52GO:0016042: lipid catabolic process1.59E-02
53GO:0006508: proteolysis1.61E-02
54GO:0009751: response to salicylic acid1.61E-02
55GO:0009873: ethylene-activated signaling pathway1.95E-02
56GO:0009738: abscisic acid-activated signaling pathway2.38E-02
57GO:0009555: pollen development2.44E-02
58GO:0035556: intracellular signal transduction2.54E-02
59GO:0009414: response to water deprivation3.97E-02
60GO:0042742: defense response to bacterium4.04E-02
61GO:0006468: protein phosphorylation4.05E-02
62GO:0006979: response to oxidative stress4.06E-02
RankGO TermAdjusted P value
1GO:0047886: farnesol dehydrogenase activity0.00E+00
2GO:0015157: oligosaccharide transmembrane transporter activity1.21E-05
3GO:0004298: threonine-type endopeptidase activity1.98E-05
4GO:0003994: aconitate hydratase activity3.21E-05
5GO:0005093: Rab GDP-dissociation inhibitor activity5.78E-05
6GO:0009678: hydrogen-translocating pyrophosphatase activity8.79E-05
7GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.59E-04
8GO:0036402: proteasome-activating ATPase activity1.98E-04
9GO:0004709: MAP kinase kinase kinase activity1.98E-04
10GO:0004427: inorganic diphosphatase activity2.82E-04
11GO:0005524: ATP binding4.38E-04
12GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.76E-04
13GO:0017025: TBP-class protein binding7.88E-04
14GO:0005515: protein binding8.89E-04
15GO:0008233: peptidase activity1.01E-03
16GO:0050662: coenzyme binding1.47E-03
17GO:0004004: ATP-dependent RNA helicase activity2.30E-03
18GO:0005096: GTPase activator activity2.55E-03
19GO:0004712: protein serine/threonine/tyrosine kinase activity3.06E-03
20GO:0051539: 4 iron, 4 sulfur cluster binding3.15E-03
21GO:0004185: serine-type carboxypeptidase activity3.43E-03
22GO:0005516: calmodulin binding3.89E-03
23GO:0016298: lipase activity4.30E-03
24GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.81E-03
25GO:0016874: ligase activity5.13E-03
26GO:0016301: kinase activity5.22E-03
27GO:0008026: ATP-dependent helicase activity5.56E-03
28GO:0004386: helicase activity5.67E-03
29GO:0016491: oxidoreductase activity6.86E-03
30GO:0003743: translation initiation factor activity8.69E-03
31GO:0000287: magnesium ion binding1.04E-02
32GO:0052689: carboxylic ester hydrolase activity1.32E-02
33GO:0016887: ATPase activity2.22E-02
34GO:0004674: protein serine/threonine kinase activity2.58E-02
35GO:0005507: copper ion binding3.14E-02
36GO:0003824: catalytic activity4.32E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex5.39E-06
2GO:0012510: trans-Golgi network transport vesicle membrane1.21E-05
3GO:0019774: proteasome core complex, beta-subunit complex1.21E-05
4GO:0005839: proteasome core complex1.98E-05
5GO:0005774: vacuolar membrane5.58E-05
6GO:0005776: autophagosome1.22E-04
7GO:0008250: oligosaccharyltransferase complex1.59E-04
8GO:0031597: cytosolic proteasome complex2.39E-04
9GO:0031595: nuclear proteasome complex2.82E-04
10GO:0008540: proteasome regulatory particle, base subcomplex4.69E-04
11GO:0005829: cytosol7.55E-04
12GO:0005769: early endosome8.44E-04
13GO:0005773: vacuole9.17E-04
14GO:0031410: cytoplasmic vesicle1.08E-03
15GO:0005618: cell wall3.59E-03
16GO:0005802: trans-Golgi network4.14E-03
17GO:0005768: endosome4.70E-03
18GO:0005783: endoplasmic reticulum7.36E-03
19GO:0005615: extracellular space8.43E-03
20GO:0048046: apoplast1.90E-02
21GO:0005777: peroxisome2.69E-02
22GO:0005622: intracellular3.68E-02
23GO:0005737: cytoplasm3.81E-02
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Gene type



Gene DE type