Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045730: respiratory burst0.00E+00
2GO:0035264: multicellular organism growth0.00E+00
3GO:0032499: detection of peptidoglycan0.00E+00
4GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:0070212: protein poly-ADP-ribosylation0.00E+00
8GO:1900367: positive regulation of defense response to insect0.00E+00
9GO:0002764: immune response-regulating signaling pathway0.00E+00
10GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
11GO:0033587: shikimate biosynthetic process0.00E+00
12GO:0010200: response to chitin2.00E-08
13GO:0006468: protein phosphorylation2.58E-08
14GO:0009626: plant-type hypersensitive response1.30E-07
15GO:0080142: regulation of salicylic acid biosynthetic process1.19E-06
16GO:0060548: negative regulation of cell death1.19E-06
17GO:0042742: defense response to bacterium1.59E-06
18GO:0009697: salicylic acid biosynthetic process2.65E-06
19GO:0031348: negative regulation of defense response2.42E-05
20GO:0000187: activation of MAPK activity6.40E-05
21GO:0045088: regulation of innate immune response1.12E-04
22GO:0006952: defense response1.40E-04
23GO:0002237: response to molecule of bacterial origin1.53E-04
24GO:0010225: response to UV-C1.73E-04
25GO:0009816: defense response to bacterium, incompatible interaction1.78E-04
26GO:0070588: calcium ion transmembrane transport1.80E-04
27GO:0009617: response to bacterium2.17E-04
28GO:2000037: regulation of stomatal complex patterning3.30E-04
29GO:0046470: phosphatidylcholine metabolic process4.25E-04
30GO:0019673: GDP-mannose metabolic process4.40E-04
31GO:0042759: long-chain fatty acid biosynthetic process4.40E-04
32GO:0010365: positive regulation of ethylene biosynthetic process4.40E-04
33GO:0051938: L-glutamate import4.40E-04
34GO:0051245: negative regulation of cellular defense response4.40E-04
35GO:0019567: arabinose biosynthetic process4.40E-04
36GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.40E-04
37GO:0010941: regulation of cell death4.40E-04
38GO:0010421: hydrogen peroxide-mediated programmed cell death4.40E-04
39GO:0007229: integrin-mediated signaling pathway4.40E-04
40GO:1901183: positive regulation of camalexin biosynthetic process4.40E-04
41GO:0009270: response to humidity4.40E-04
42GO:0080157: regulation of plant-type cell wall organization or biogenesis4.40E-04
43GO:0032491: detection of molecule of fungal origin4.40E-04
44GO:0015784: GDP-mannose transport4.40E-04
45GO:0006643: membrane lipid metabolic process4.40E-04
46GO:2000031: regulation of salicylic acid mediated signaling pathway6.48E-04
47GO:0046777: protein autophosphorylation6.79E-04
48GO:0009809: lignin biosynthetic process8.83E-04
49GO:0002221: pattern recognition receptor signaling pathway9.50E-04
50GO:0043091: L-arginine import9.50E-04
51GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.50E-04
52GO:0015802: basic amino acid transport9.50E-04
53GO:0010618: aerenchyma formation9.50E-04
54GO:0019725: cellular homeostasis9.50E-04
55GO:0007166: cell surface receptor signaling pathway9.63E-04
56GO:0043069: negative regulation of programmed cell death1.06E-03
57GO:0007064: mitotic sister chromatid cohesion1.06E-03
58GO:0009620: response to fungus1.31E-03
59GO:0051176: positive regulation of sulfur metabolic process1.55E-03
60GO:0045793: positive regulation of cell size1.55E-03
61GO:0010186: positive regulation of cellular defense response1.55E-03
62GO:0015783: GDP-fucose transport1.55E-03
63GO:0048281: inflorescence morphogenesis1.55E-03
64GO:0016045: detection of bacterium1.55E-03
65GO:0034051: negative regulation of plant-type hypersensitive response1.55E-03
66GO:0010498: proteasomal protein catabolic process1.55E-03
67GO:0009062: fatty acid catabolic process1.55E-03
68GO:1900140: regulation of seedling development1.55E-03
69GO:0010581: regulation of starch biosynthetic process1.55E-03
70GO:0010359: regulation of anion channel activity1.55E-03
71GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.55E-03
72GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.55E-03
73GO:0002230: positive regulation of defense response to virus by host1.55E-03
74GO:0010229: inflorescence development1.59E-03
75GO:0055046: microgametogenesis1.59E-03
76GO:0009742: brassinosteroid mediated signaling pathway1.65E-03
77GO:0008219: cell death1.78E-03
78GO:0006979: response to oxidative stress1.95E-03
79GO:0002679: respiratory burst involved in defense response2.24E-03
80GO:0046513: ceramide biosynthetic process2.24E-03
81GO:0046836: glycolipid transport2.24E-03
82GO:0046713: borate transport2.24E-03
83GO:0048194: Golgi vesicle budding2.24E-03
84GO:0072334: UDP-galactose transmembrane transport2.24E-03
85GO:0010306: rhamnogalacturonan II biosynthetic process2.24E-03
86GO:0006612: protein targeting to membrane2.24E-03
87GO:0072583: clathrin-dependent endocytosis2.24E-03
88GO:0071323: cellular response to chitin2.24E-03
89GO:0045227: capsule polysaccharide biosynthetic process3.01E-03
90GO:0046345: abscisic acid catabolic process3.01E-03
91GO:0010483: pollen tube reception3.01E-03
92GO:0010107: potassium ion import3.01E-03
93GO:0033358: UDP-L-arabinose biosynthetic process3.01E-03
94GO:0010363: regulation of plant-type hypersensitive response3.01E-03
95GO:0071219: cellular response to molecule of bacterial origin3.01E-03
96GO:2000038: regulation of stomatal complex development3.01E-03
97GO:0010508: positive regulation of autophagy3.01E-03
98GO:0071456: cellular response to hypoxia3.31E-03
99GO:0009814: defense response, incompatible interaction3.31E-03
100GO:0016226: iron-sulfur cluster assembly3.31E-03
101GO:0010150: leaf senescence3.48E-03
102GO:0009625: response to insect3.61E-03
103GO:0010227: floral organ abscission3.61E-03
104GO:0032957: inositol trisphosphate metabolic process3.85E-03
105GO:0009164: nucleoside catabolic process3.85E-03
106GO:0010117: photoprotection3.85E-03
107GO:0009611: response to wounding4.19E-03
108GO:0050832: defense response to fungus4.29E-03
109GO:0009737: response to abscisic acid4.50E-03
110GO:0016042: lipid catabolic process4.53E-03
111GO:0010118: stomatal movement4.60E-03
112GO:0009751: response to salicylic acid4.64E-03
113GO:0002238: response to molecule of fungal origin4.77E-03
114GO:0046855: inositol phosphate dephosphorylation4.77E-03
115GO:0010942: positive regulation of cell death4.77E-03
116GO:0010405: arabinogalactan protein metabolic process4.77E-03
117GO:0018258: protein O-linked glycosylation via hydroxyproline4.77E-03
118GO:0006486: protein glycosylation4.87E-03
119GO:0010555: response to mannitol5.75E-03
120GO:0010310: regulation of hydrogen peroxide metabolic process5.75E-03
121GO:2000067: regulation of root morphogenesis5.75E-03
122GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.75E-03
123GO:0042372: phylloquinone biosynthetic process5.75E-03
124GO:0006891: intra-Golgi vesicle-mediated transport6.14E-03
125GO:0016032: viral process6.56E-03
126GO:0010044: response to aluminum ion6.80E-03
127GO:0010161: red light signaling pathway6.80E-03
128GO:0098869: cellular oxidant detoxification6.80E-03
129GO:0071446: cellular response to salicylic acid stimulus6.80E-03
130GO:1900056: negative regulation of leaf senescence6.80E-03
131GO:0070370: cellular heat acclimation6.80E-03
132GO:0030091: protein repair7.91E-03
133GO:0051607: defense response to virus8.40E-03
134GO:0001666: response to hypoxia8.90E-03
135GO:0030968: endoplasmic reticulum unfolded protein response9.09E-03
136GO:0009808: lignin metabolic process9.09E-03
137GO:0010099: regulation of photomorphogenesis9.09E-03
138GO:0007186: G-protein coupled receptor signaling pathway9.09E-03
139GO:0010204: defense response signaling pathway, resistance gene-independent9.09E-03
140GO:0009627: systemic acquired resistance9.96E-03
141GO:0009051: pentose-phosphate shunt, oxidative branch1.03E-02
142GO:0051865: protein autoubiquitination1.03E-02
143GO:0006098: pentose-phosphate shunt1.03E-02
144GO:0090333: regulation of stomatal closure1.03E-02
145GO:0046916: cellular transition metal ion homeostasis1.03E-02
146GO:0010112: regulation of systemic acquired resistance1.03E-02
147GO:0009409: response to cold1.08E-02
148GO:0007165: signal transduction1.08E-02
149GO:0016567: protein ubiquitination1.10E-02
150GO:1900426: positive regulation of defense response to bacterium1.16E-02
151GO:0048354: mucilage biosynthetic process involved in seed coat development1.16E-02
152GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.16E-02
153GO:0009738: abscisic acid-activated signaling pathway1.22E-02
154GO:0009832: plant-type cell wall biogenesis1.22E-02
155GO:0009870: defense response signaling pathway, resistance gene-dependent1.30E-02
156GO:0035556: intracellular signal transduction1.42E-02
157GO:0009750: response to fructose1.44E-02
158GO:0046856: phosphatidylinositol dephosphorylation1.44E-02
159GO:0045087: innate immune response1.48E-02
160GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.58E-02
161GO:0008361: regulation of cell size1.58E-02
162GO:0012501: programmed cell death1.58E-02
163GO:0015706: nitrate transport1.58E-02
164GO:0002213: defense response to insect1.58E-02
165GO:0010105: negative regulation of ethylene-activated signaling pathway1.58E-02
166GO:0032259: methylation1.59E-02
167GO:0009785: blue light signaling pathway1.73E-02
168GO:0006006: glucose metabolic process1.73E-02
169GO:0006887: exocytosis1.76E-02
170GO:0006470: protein dephosphorylation1.82E-02
171GO:0010540: basipetal auxin transport1.89E-02
172GO:0009266: response to temperature stimulus1.89E-02
173GO:0034605: cellular response to heat1.89E-02
174GO:0007034: vacuolar transport1.89E-02
175GO:0009744: response to sucrose1.91E-02
176GO:0051707: response to other organism1.91E-02
177GO:0010468: regulation of gene expression1.92E-02
178GO:0090351: seedling development2.05E-02
179GO:0046854: phosphatidylinositol phosphorylation2.05E-02
180GO:0009969: xyloglucan biosynthetic process2.05E-02
181GO:0009225: nucleotide-sugar metabolic process2.05E-02
182GO:0010167: response to nitrate2.05E-02
183GO:0006855: drug transmembrane transport2.23E-02
184GO:0000165: MAPK cascade2.32E-02
185GO:0006487: protein N-linked glycosylation2.38E-02
186GO:0009863: salicylic acid mediated signaling pathway2.38E-02
187GO:0009695: jasmonic acid biosynthetic process2.55E-02
188GO:0048511: rhythmic process2.73E-02
189GO:0031408: oxylipin biosynthetic process2.73E-02
190GO:0048278: vesicle docking2.73E-02
191GO:0003333: amino acid transmembrane transport2.73E-02
192GO:0009909: regulation of flower development2.86E-02
193GO:0010017: red or far-red light signaling pathway2.91E-02
194GO:2000022: regulation of jasmonic acid mediated signaling pathway2.91E-02
195GO:0006970: response to osmotic stress2.93E-02
196GO:0006012: galactose metabolic process3.10E-02
197GO:0009651: response to salt stress3.16E-02
198GO:0010584: pollen exine formation3.29E-02
199GO:0019722: calcium-mediated signaling3.29E-02
200GO:0009561: megagametogenesis3.29E-02
201GO:0042147: retrograde transport, endosome to Golgi3.48E-02
202GO:0042391: regulation of membrane potential3.68E-02
203GO:0042631: cellular response to water deprivation3.68E-02
204GO:0061025: membrane fusion4.09E-02
205GO:0009646: response to absence of light4.09E-02
206GO:0008654: phospholipid biosynthetic process4.30E-02
207GO:0009749: response to glucose4.30E-02
208GO:0045892: negative regulation of transcription, DNA-templated4.43E-02
209GO:0010193: response to ozone4.51E-02
210GO:0006635: fatty acid beta-oxidation4.51E-02
211GO:0000302: response to reactive oxygen species4.51E-02
212GO:0002229: defense response to oomycetes4.51E-02
213GO:0009630: gravitropism4.73E-02
214GO:0030163: protein catabolic process4.94E-02
215GO:0009845: seed germination4.95E-02
RankGO TermAdjusted P value
1GO:0005458: GDP-mannose transmembrane transporter activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0070191: methionine-R-sulfoxide reductase activity0.00E+00
4GO:2001080: chitosan binding0.00E+00
5GO:0016301: kinase activity7.27E-09
6GO:0004674: protein serine/threonine kinase activity6.31E-08
7GO:0005524: ATP binding4.72E-05
8GO:0019199: transmembrane receptor protein kinase activity1.12E-04
9GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.22E-04
10GO:0005388: calcium-transporting ATPase activity1.27E-04
11GO:0047631: ADP-ribose diphosphatase activity1.73E-04
12GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.73E-04
13GO:0000210: NAD+ diphosphatase activity2.46E-04
14GO:0033612: receptor serine/threonine kinase binding3.19E-04
15GO:0004012: phospholipid-translocating ATPase activity3.30E-04
16GO:0031127: alpha-(1,2)-fucosyltransferase activity4.40E-04
17GO:0032050: clathrin heavy chain binding4.40E-04
18GO:0008809: carnitine racemase activity4.40E-04
19GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.40E-04
20GO:0015085: calcium ion transmembrane transporter activity4.40E-04
21GO:0080042: ADP-glucose pyrophosphohydrolase activity4.40E-04
22GO:0008446: GDP-mannose 4,6-dehydratase activity4.40E-04
23GO:0008909: isochorismate synthase activity4.40E-04
24GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.40E-04
25GO:0043531: ADP binding4.62E-04
26GO:0005509: calcium ion binding5.16E-04
27GO:0004708: MAP kinase kinase activity5.32E-04
28GO:0004714: transmembrane receptor protein tyrosine kinase activity5.32E-04
29GO:0004630: phospholipase D activity6.48E-04
30GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.48E-04
31GO:0050291: sphingosine N-acyltransferase activity9.50E-04
32GO:0080041: ADP-ribose pyrophosphohydrolase activity9.50E-04
33GO:0022821: potassium ion antiporter activity9.50E-04
34GO:0017110: nucleoside-diphosphatase activity9.50E-04
35GO:0001671: ATPase activator activity9.50E-04
36GO:0008171: O-methyltransferase activity1.06E-03
37GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity1.55E-03
38GO:0016595: glutamate binding1.55E-03
39GO:0005457: GDP-fucose transmembrane transporter activity1.55E-03
40GO:0001664: G-protein coupled receptor binding1.55E-03
41GO:0042409: caffeoyl-CoA O-methyltransferase activity1.55E-03
42GO:0046423: allene-oxide cyclase activity1.55E-03
43GO:0031683: G-protein beta/gamma-subunit complex binding1.55E-03
44GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.59E-03
45GO:0004672: protein kinase activity1.73E-03
46GO:0004190: aspartic-type endopeptidase activity2.02E-03
47GO:0005515: protein binding2.17E-03
48GO:0004165: dodecenoyl-CoA delta-isomerase activity2.24E-03
49GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity2.24E-03
50GO:0015189: L-lysine transmembrane transporter activity2.24E-03
51GO:0017089: glycolipid transporter activity2.24E-03
52GO:0004445: inositol-polyphosphate 5-phosphatase activity2.24E-03
53GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.24E-03
54GO:0015181: arginine transmembrane transporter activity2.24E-03
55GO:0043424: protein histidine kinase binding2.75E-03
56GO:0050373: UDP-arabinose 4-epimerase activity3.01E-03
57GO:0004345: glucose-6-phosphate dehydrogenase activity3.01E-03
58GO:0051861: glycolipid binding3.01E-03
59GO:0005313: L-glutamate transmembrane transporter activity3.01E-03
60GO:0045431: flavonol synthase activity3.85E-03
61GO:0010294: abscisic acid glucosyltransferase activity3.85E-03
62GO:0005459: UDP-galactose transmembrane transporter activity3.85E-03
63GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.85E-03
64GO:0004842: ubiquitin-protein transferase activity4.15E-03
65GO:0004605: phosphatidate cytidylyltransferase activity4.77E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity4.77E-03
67GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity4.77E-03
68GO:0035252: UDP-xylosyltransferase activity4.77E-03
69GO:0016298: lipase activity5.09E-03
70GO:0008234: cysteine-type peptidase activity5.55E-03
71GO:0019901: protein kinase binding5.73E-03
72GO:0003978: UDP-glucose 4-epimerase activity5.75E-03
73GO:0019900: kinase binding5.75E-03
74GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.75E-03
75GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.75E-03
76GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5.75E-03
77GO:0004620: phospholipase activity6.80E-03
78GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity6.80E-03
79GO:0005338: nucleotide-sugar transmembrane transporter activity6.80E-03
80GO:0052747: sinapyl alcohol dehydrogenase activity7.91E-03
81GO:0005544: calcium-dependent phospholipid binding7.91E-03
82GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.92E-03
83GO:0005516: calmodulin binding8.94E-03
84GO:0004430: 1-phosphatidylinositol 4-kinase activity9.09E-03
85GO:0008375: acetylglucosaminyltransferase activity9.96E-03
86GO:0008417: fucosyltransferase activity1.03E-02
87GO:0071949: FAD binding1.03E-02
88GO:0004806: triglyceride lipase activity1.05E-02
89GO:0015112: nitrate transmembrane transporter activity1.16E-02
90GO:0015174: basic amino acid transmembrane transporter activity1.16E-02
91GO:0015238: drug transmembrane transporter activity1.22E-02
92GO:0004568: chitinase activity1.30E-02
93GO:0008047: enzyme activator activity1.30E-02
94GO:0004713: protein tyrosine kinase activity1.30E-02
95GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.35E-02
96GO:0008559: xenobiotic-transporting ATPase activity1.44E-02
97GO:0047372: acylglycerol lipase activity1.44E-02
98GO:0045551: cinnamyl-alcohol dehydrogenase activity1.58E-02
99GO:0008378: galactosyltransferase activity1.58E-02
100GO:0004521: endoribonuclease activity1.58E-02
101GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.58E-02
102GO:0015095: magnesium ion transmembrane transporter activity1.73E-02
103GO:0030552: cAMP binding2.05E-02
104GO:0030553: cGMP binding2.05E-02
105GO:0008061: chitin binding2.05E-02
106GO:0003954: NADH dehydrogenase activity2.38E-02
107GO:0051087: chaperone binding2.55E-02
108GO:0005216: ion channel activity2.55E-02
109GO:0019706: protein-cysteine S-palmitoyltransferase activity2.73E-02
110GO:0004707: MAP kinase activity2.73E-02
111GO:0046872: metal ion binding2.74E-02
112GO:0005249: voltage-gated potassium channel activity3.68E-02
113GO:0030551: cyclic nucleotide binding3.68E-02
114GO:0003713: transcription coactivator activity3.88E-02
115GO:0010181: FMN binding4.09E-02
116GO:0004197: cysteine-type endopeptidase activity4.73E-02
117GO:0004722: protein serine/threonine phosphatase activity4.87E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.57E-10
2GO:0016021: integral component of membrane7.49E-04
3GO:0031304: intrinsic component of mitochondrial inner membrane9.50E-04
4GO:0005901: caveola9.50E-04
5GO:0042406: extrinsic component of endoplasmic reticulum membrane1.55E-03
6GO:0030176: integral component of endoplasmic reticulum membrane2.02E-03
7GO:0030173: integral component of Golgi membrane5.75E-03
8GO:0012505: endomembrane system7.36E-03
9GO:0032580: Golgi cisterna membrane7.45E-03
10GO:0030125: clathrin vesicle coat1.30E-02
11GO:0031012: extracellular matrix1.73E-02
12GO:0005795: Golgi stack2.05E-02
13GO:0005769: early endosome2.21E-02
14GO:0043234: protein complex2.21E-02
15GO:0005758: mitochondrial intermembrane space2.38E-02
16GO:0005887: integral component of plasma membrane2.67E-02
17GO:0010008: endosome membrane3.15E-02
18GO:0005834: heterotrimeric G-protein complex3.25E-02
19GO:0005794: Golgi apparatus4.09E-02
20GO:0009504: cell plate4.30E-02
21GO:0005737: cytoplasm4.62E-02
22GO:0000145: exocyst4.73E-02
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Gene type



Gene DE type