co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G59570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
3	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
4	GO:0046865: terpenoid transport	0.00E+00
5	GO:0018063: cytochrome c-heme linkage	0.00E+00
6	GO:1902009: positive regulation of toxin transport	0.00E+00
7	GO:0051553: flavone biosynthetic process	0.00E+00
8	GO:0010055: atrichoblast differentiation	0.00E+00
9	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
10	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
11	GO:1902001: fatty acid transmembrane transport	0.00E+00
12	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
13	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
14	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.92E-05
15	GO:0006605: protein targeting	1.92E-05
16	GO:0010112: regulation of systemic acquired resistance	3.73E-05
17	GO:0006623: protein targeting to vacuole	6.73E-05
18	GO:0042742: defense response to bacterium	1.70E-04
19	GO:0009751: response to salicylic acid	2.93E-04
20	GO:0071456: cellular response to hypoxia	3.43E-04
21	GO:0015031: protein transport	3.61E-04
22	GO:1900057: positive regulation of leaf senescence	4.10E-04
23	GO:0033306: phytol metabolic process	4.29E-04
24	GO:0010230: alternative respiration	4.29E-04
25	GO:0050691: regulation of defense response to virus by host	4.29E-04
26	GO:0009968: negative regulation of signal transduction	4.29E-04
27	GO:1990542: mitochondrial transmembrane transport	4.29E-04
28	GO:0032107: regulation of response to nutrient levels	4.29E-04
29	GO:0043547: positive regulation of GTPase activity	4.29E-04
30	GO:1990641: response to iron ion starvation	4.29E-04
31	GO:0051707: response to other organism	5.28E-04
32	GO:0010200: response to chitin	5.89E-04
33	GO:0010193: response to ozone	7.63E-04
34	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.83E-04
35	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	9.27E-04
36	GO:0015908: fatty acid transport	9.27E-04
37	GO:0006101: citrate metabolic process	9.27E-04
38	GO:0000719: photoreactive repair	9.27E-04
39	GO:0044419: interspecies interaction between organisms	9.27E-04
40	GO:0051258: protein polymerization	9.27E-04
41	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.27E-04
42	GO:0015012: heparan sulfate proteoglycan biosynthetic process	9.27E-04
43	GO:0071668: plant-type cell wall assembly	9.27E-04
44	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.27E-04
45	GO:0080181: lateral root branching	9.27E-04
46	GO:0006024: glycosaminoglycan biosynthetic process	9.27E-04
47	GO:0055088: lipid homeostasis	9.27E-04
48	GO:0009617: response to bacterium	9.73E-04
49	GO:0051607: defense response to virus	1.13E-03
50	GO:0009620: response to fungus	1.24E-03
51	GO:0045037: protein import into chloroplast stroma	1.35E-03
52	GO:0080168: abscisic acid transport	1.51E-03
53	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.51E-03
54	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.51E-03
55	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.51E-03
56	GO:0071398: cellular response to fatty acid	1.51E-03
57	GO:0006065: UDP-glucuronate biosynthetic process	1.51E-03
58	GO:0015783: GDP-fucose transport	1.51E-03
59	GO:0010476: gibberellin mediated signaling pathway	1.51E-03
60	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.51E-03
61	GO:0015692: lead ion transport	1.51E-03
62	GO:0052546: cell wall pectin metabolic process	1.51E-03
63	GO:0015695: organic cation transport	1.51E-03
64	GO:0010102: lateral root morphogenesis	1.54E-03
65	GO:0009737: response to abscisic acid	1.55E-03
66	GO:0002237: response to molecule of bacterial origin	1.73E-03
67	GO:0015696: ammonium transport	2.18E-03
68	GO:0071323: cellular response to chitin	2.18E-03
69	GO:0080024: indolebutyric acid metabolic process	2.18E-03
70	GO:0055070: copper ion homeostasis	2.18E-03
71	GO:0001676: long-chain fatty acid metabolic process	2.18E-03
72	GO:0055089: fatty acid homeostasis	2.18E-03
73	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.18E-03
74	GO:0070301: cellular response to hydrogen peroxide	2.18E-03
75	GO:0002239: response to oomycetes	2.18E-03
76	GO:0080147: root hair cell development	2.40E-03
77	GO:0006874: cellular calcium ion homeostasis	2.65E-03
78	GO:0006631: fatty acid metabolic process	2.86E-03
79	GO:0006621: protein retention in ER lumen	2.93E-03
80	GO:1901002: positive regulation of response to salt stress	2.93E-03
81	GO:0015867: ATP transport	2.93E-03
82	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.93E-03
83	GO:0072488: ammonium transmembrane transport	2.93E-03
84	GO:0031348: negative regulation of defense response	3.19E-03
85	GO:0010150: leaf senescence	3.28E-03
86	GO:0034052: positive regulation of plant-type hypersensitive response	3.76E-03
87	GO:0006097: glyoxylate cycle	3.76E-03
88	GO:0009229: thiamine diphosphate biosynthetic process	3.76E-03
89	GO:1900425: negative regulation of defense response to bacterium	4.65E-03
90	GO:0033365: protein localization to organelle	4.65E-03
91	GO:0009228: thiamine biosynthetic process	4.65E-03
92	GO:0009643: photosynthetic acclimation	4.65E-03
93	GO:0009759: indole glucosinolate biosynthetic process	4.65E-03
94	GO:0015866: ADP transport	4.65E-03
95	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	4.65E-03
96	GO:0010256: endomembrane system organization	4.65E-03
97	GO:0010182: sugar mediated signaling pathway	4.78E-03
98	GO:0006979: response to oxidative stress	5.26E-03
99	GO:0045926: negative regulation of growth	5.60E-03
100	GO:0048444: floral organ morphogenesis	5.60E-03
101	GO:0002229: defense response to oomycetes	5.91E-03
102	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.62E-03
103	GO:2000014: regulation of endosperm development	6.62E-03
104	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.62E-03
105	GO:0006333: chromatin assembly or disassembly	6.62E-03
106	GO:1902074: response to salt	6.62E-03
107	GO:0010044: response to aluminum ion	6.62E-03
108	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.62E-03
109	GO:1900056: negative regulation of leaf senescence	6.62E-03
110	GO:0009850: auxin metabolic process	7.71E-03
111	GO:0045010: actin nucleation	7.71E-03
112	GO:0031540: regulation of anthocyanin biosynthetic process	7.71E-03
113	GO:0006102: isocitrate metabolic process	7.71E-03
114	GO:0007275: multicellular organism development	8.66E-03
115	GO:0010120: camalexin biosynthetic process	8.84E-03
116	GO:0006997: nucleus organization	8.84E-03
117	GO:0010204: defense response signaling pathway, resistance gene-independent	8.84E-03
118	GO:0017004: cytochrome complex assembly	8.84E-03
119	GO:0010208: pollen wall assembly	8.84E-03
120	GO:0010029: regulation of seed germination	9.07E-03
121	GO:0009816: defense response to bacterium, incompatible interaction	9.07E-03
122	GO:0006952: defense response	9.34E-03
123	GO:0009627: systemic acquired resistance	9.58E-03
124	GO:0019432: triglyceride biosynthetic process	1.00E-02
125	GO:0009056: catabolic process	1.00E-02
126	GO:0000902: cell morphogenesis	1.00E-02
127	GO:0015780: nucleotide-sugar transport	1.00E-02
128	GO:0009835: fruit ripening	1.00E-02
129	GO:0007338: single fertilization	1.00E-02
130	GO:0009817: defense response to fungus, incompatible interaction	1.12E-02
131	GO:0009086: methionine biosynthetic process	1.13E-02
132	GO:0008202: steroid metabolic process	1.13E-02
133	GO:0006886: intracellular protein transport	1.22E-02
134	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.26E-02
135	GO:0006032: chitin catabolic process	1.26E-02
136	GO:0009688: abscisic acid biosynthetic process	1.26E-02
137	GO:0010629: negative regulation of gene expression	1.26E-02
138	GO:0051555: flavonol biosynthetic process	1.26E-02
139	GO:0019684: photosynthesis, light reaction	1.40E-02
140	GO:0009089: lysine biosynthetic process via diaminopimelate	1.40E-02
141	GO:0009684: indoleacetic acid biosynthetic process	1.40E-02
142	GO:0006099: tricarboxylic acid cycle	1.49E-02
143	GO:0000266: mitochondrial fission	1.54E-02
144	GO:0009408: response to heat	1.60E-02
145	GO:2000012: regulation of auxin polar transport	1.69E-02
146	GO:0007166: cell surface receptor signaling pathway	1.74E-02
147	GO:0009753: response to jasmonic acid	1.78E-02
148	GO:0007015: actin filament organization	1.84E-02
149	GO:0090351: seedling development	1.99E-02
150	GO:0009225: nucleotide-sugar metabolic process	1.99E-02
151	GO:0009636: response to toxic substance	2.07E-02
152	GO:0034976: response to endoplasmic reticulum stress	2.15E-02
153	GO:0006636: unsaturated fatty acid biosynthetic process	2.15E-02
154	GO:0006855: drug transmembrane transport	2.15E-02
155	GO:0000162: tryptophan biosynthetic process	2.15E-02
156	GO:0050832: defense response to fungus	2.22E-02
157	GO:0031347: regulation of defense response	2.23E-02
158	GO:0030150: protein import into mitochondrial matrix	2.32E-02
159	GO:0006289: nucleotide-excision repair	2.32E-02
160	GO:0051302: regulation of cell division	2.49E-02
161	GO:0016998: cell wall macromolecule catabolic process	2.66E-02
162	GO:0006334: nucleosome assembly	2.66E-02
163	GO:0009269: response to desiccation	2.66E-02
164	GO:0009734: auxin-activated signaling pathway	2.67E-02
165	GO:0006970: response to osmotic stress	2.79E-02
166	GO:0016226: iron-sulfur cluster assembly	2.84E-02
167	GO:0009693: ethylene biosynthetic process	3.02E-02
168	GO:0009411: response to UV	3.02E-02
169	GO:0006012: galactose metabolic process	3.02E-02
170	GO:0009723: response to ethylene	3.05E-02
171	GO:0009626: plant-type hypersensitive response	3.13E-02
172	GO:0042127: regulation of cell proliferation	3.20E-02
173	GO:0042391: regulation of membrane potential	3.58E-02
174	GO:0010118: stomatal movement	3.58E-02
175	GO:0009960: endosperm development	3.78E-02
176	GO:0006520: cellular amino acid metabolic process	3.78E-02
177	GO:0010197: polar nucleus fusion	3.78E-02
178	GO:0009611: response to wounding	3.85E-02
179	GO:0009749: response to glucose	4.18E-02
180	GO:0071554: cell wall organization or biogenesis	4.39E-02
181	GO:0000302: response to reactive oxygen species	4.39E-02
182	GO:0006635: fatty acid beta-oxidation	4.39E-02
183	GO:0006869: lipid transport	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0034338: short-chain carboxylesterase activity	0.00E+00
6	GO:0033759: flavone synthase activity	0.00E+00
7	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
8	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
9	GO:0004656: procollagen-proline 4-dioxygenase activity	8.12E-06
10	GO:0031418: L-ascorbic acid binding	2.32E-04
11	GO:0102391: decanoate--CoA ligase activity	3.18E-04
12	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.53E-04
13	GO:0004467: long-chain fatty acid-CoA ligase activity	4.10E-04
14	GO:0030942: endoplasmic reticulum signal peptide binding	4.29E-04
15	GO:0047150: betaine-homocysteine S-methyltransferase activity	4.29E-04
16	GO:0009000: selenocysteine lyase activity	4.29E-04
17	GO:0015245: fatty acid transporter activity	4.29E-04
18	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.29E-04
19	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.29E-04
20	GO:0032934: sterol binding	9.27E-04
21	GO:0050736: O-malonyltransferase activity	9.27E-04
22	GO:0015036: disulfide oxidoreductase activity	9.27E-04
23	GO:0010331: gibberellin binding	9.27E-04
24	GO:0003994: aconitate hydratase activity	9.27E-04
25	GO:0032403: protein complex binding	1.51E-03
26	GO:0005457: GDP-fucose transmembrane transporter activity	1.51E-03
27	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.51E-03
28	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.51E-03
29	GO:0004324: ferredoxin-NADP+ reductase activity	1.51E-03
30	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.51E-03
31	GO:0005217: intracellular ligand-gated ion channel activity	1.94E-03
32	GO:0004970: ionotropic glutamate receptor activity	1.94E-03
33	GO:0035529: NADH pyrophosphatase activity	2.18E-03
34	GO:0030527: structural constituent of chromatin	2.18E-03
35	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.18E-03
36	GO:0017077: oxidative phosphorylation uncoupler activity	2.18E-03
37	GO:0001046: core promoter sequence-specific DNA binding	2.40E-03
38	GO:0050378: UDP-glucuronate 4-epimerase activity	2.93E-03
39	GO:0004930: G-protein coupled receptor activity	2.93E-03
40	GO:0004834: tryptophan synthase activity	2.93E-03
41	GO:0046923: ER retention sequence binding	2.93E-03
42	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	3.76E-03
43	GO:0004623: phospholipase A2 activity	3.76E-03
44	GO:0005496: steroid binding	3.76E-03
45	GO:0047631: ADP-ribose diphosphatase activity	3.76E-03
46	GO:0030151: molybdenum ion binding	3.76E-03
47	GO:0005509: calcium ion binding	4.34E-03
48	GO:0000210: NAD+ diphosphatase activity	4.65E-03
49	GO:0008519: ammonium transmembrane transporter activity	4.65E-03
50	GO:0003978: UDP-glucose 4-epimerase activity	5.60E-03
51	GO:0004144: diacylglycerol O-acyltransferase activity	5.60E-03
52	GO:0005347: ATP transmembrane transporter activity	5.60E-03
53	GO:0015217: ADP transmembrane transporter activity	5.60E-03
54	GO:0008320: protein transmembrane transporter activity	6.62E-03
55	GO:0008483: transaminase activity	7.62E-03
56	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.71E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	7.71E-03
58	GO:0004869: cysteine-type endopeptidase inhibitor activity	7.71E-03
59	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.71E-03
60	GO:0008312: 7S RNA binding	7.71E-03
61	GO:0008142: oxysterol binding	8.84E-03
62	GO:0008375: acetylglucosaminyltransferase activity	9.58E-03
63	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.00E-02
64	GO:0004806: triglyceride lipase activity	1.01E-02
65	GO:0030247: polysaccharide binding	1.01E-02
66	GO:0030170: pyridoxal phosphate binding	1.11E-02
67	GO:0004864: protein phosphatase inhibitor activity	1.26E-02
68	GO:0030234: enzyme regulator activity	1.26E-02
69	GO:0004568: chitinase activity	1.26E-02
70	GO:0015297: antiporter activity	1.38E-02
71	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.54E-02
72	GO:0051539: 4 iron, 4 sulfur cluster binding	1.63E-02
73	GO:0008061: chitin binding	1.99E-02
74	GO:0003712: transcription cofactor activity	1.99E-02
75	GO:0030552: cAMP binding	1.99E-02
76	GO:0030553: cGMP binding	1.99E-02
77	GO:0005198: structural molecule activity	2.07E-02
78	GO:0051287: NAD binding	2.23E-02
79	GO:0051536: iron-sulfur cluster binding	2.32E-02
80	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.34E-02
81	GO:0005216: ion channel activity	2.49E-02
82	GO:0015079: potassium ion transmembrane transporter activity	2.49E-02
83	GO:0035251: UDP-glucosyltransferase activity	2.66E-02
84	GO:0003682: chromatin binding	2.73E-02
85	GO:0008810: cellulase activity	3.02E-02
86	GO:0016887: ATPase activity	3.07E-02
87	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.20E-02
88	GO:0005102: receptor binding	3.39E-02
89	GO:0030551: cyclic nucleotide binding	3.58E-02
90	GO:0005249: voltage-gated potassium channel activity	3.58E-02
91	GO:0016746: transferase activity, transferring acyl groups	3.64E-02
92	GO:0050662: coenzyme binding	3.98E-02
93	GO:0004872: receptor activity	4.18E-02
94	GO:0042803: protein homodimerization activity	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	4.39E-09
2	GO:0005794: Golgi apparatus	6.78E-06
3	GO:0005789: endoplasmic reticulum membrane	5.31E-05
4	GO:0017119: Golgi transport complex	6.36E-05
5	GO:0045252: oxoglutarate dehydrogenase complex	4.29E-04
6	GO:0030665: clathrin-coated vesicle membrane	8.83E-04
7	GO:0031314: extrinsic component of mitochondrial inner membrane	9.27E-04
8	GO:0005802: trans-Golgi network	9.99E-04
9	GO:0005743: mitochondrial inner membrane	1.03E-03
10	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.51E-03
11	GO:0005783: endoplasmic reticulum	1.72E-03
12	GO:0030658: transport vesicle membrane	2.18E-03
13	GO:0031902: late endosome membrane	2.86E-03
14	GO:0000813: ESCRT I complex	3.76E-03
15	GO:0000164: protein phosphatase type 1 complex	3.76E-03
16	GO:0005768: endosome	4.12E-03
17	GO:0005886: plasma membrane	5.09E-03
18	GO:0031965: nuclear membrane	5.52E-03
19	GO:0005801: cis-Golgi network	5.60E-03
20	GO:0005885: Arp2/3 protein complex	5.60E-03
21	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	6.62E-03
22	GO:0032580: Golgi cisterna membrane	7.18E-03
23	GO:0005887: integral component of plasma membrane	7.61E-03
24	GO:0005779: integral component of peroxisomal membrane	8.84E-03
25	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	8.84E-03
26	GO:0031225: anchored component of membrane	8.91E-03
27	GO:0005623: cell	1.01E-02
28	GO:0008540: proteasome regulatory particle, base subcomplex	1.13E-02
29	GO:0005795: Golgi stack	1.99E-02
30	GO:0046658: anchored component of plasma membrane	2.09E-02
31	GO:0000139: Golgi membrane	2.62E-02
32	GO:0005741: mitochondrial outer membrane	2.66E-02
33	GO:0009506: plasmodesma	2.75E-02
34	GO:0005774: vacuolar membrane	3.11E-02
35	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.20E-02
36	GO:0009706: chloroplast inner membrane	3.54E-02
37	GO:0009504: cell plate	4.18E-02
38	GO:0019898: extrinsic component of membrane	4.18E-02
39	GO:0009543: chloroplast thylakoid lumen	4.42E-02
40	GO:0016592: mediator complex	4.60E-02
41	GO:0000785: chromatin	4.60E-02