Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031222: arabinan catabolic process0.00E+00
2GO:0018023: peptidyl-lysine trimethylation0.00E+00
3GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
4GO:0006429: leucyl-tRNA aminoacylation0.00E+00
5GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0042352: GDP-L-fucose salvage0.00E+00
8GO:0061157: mRNA destabilization0.00E+00
9GO:0002184: cytoplasmic translational termination0.00E+00
10GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
11GO:0043392: negative regulation of DNA binding0.00E+00
12GO:1903224: regulation of endodermal cell differentiation0.00E+00
13GO:2000469: negative regulation of peroxidase activity0.00E+00
14GO:0019323: pentose catabolic process0.00E+00
15GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
16GO:0090071: negative regulation of ribosome biogenesis0.00E+00
17GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
18GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
19GO:0001778: plasma membrane repair0.00E+00
20GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
21GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
22GO:0042407: cristae formation0.00E+00
23GO:0007638: mechanosensory behavior0.00E+00
24GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
25GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
26GO:0045184: establishment of protein localization0.00E+00
27GO:0070125: mitochondrial translational elongation0.00E+00
28GO:0046620: regulation of organ growth2.11E-07
29GO:0009733: response to auxin3.83E-06
30GO:0009658: chloroplast organization1.37E-05
31GO:1900865: chloroplast RNA modification3.54E-05
32GO:0009734: auxin-activated signaling pathway4.37E-05
33GO:0018026: peptidyl-lysine monomethylation6.03E-05
34GO:0040008: regulation of growth6.18E-05
35GO:0015995: chlorophyll biosynthetic process8.18E-05
36GO:1901259: chloroplast rRNA processing1.08E-04
37GO:2000012: regulation of auxin polar transport1.13E-04
38GO:0009416: response to light stimulus1.19E-04
39GO:0048437: floral organ development1.60E-04
40GO:0009793: embryo development ending in seed dormancy2.71E-04
41GO:0009451: RNA modification3.40E-04
42GO:0016556: mRNA modification3.56E-04
43GO:0046739: transport of virus in multicellular host3.56E-04
44GO:0009742: brassinosteroid mediated signaling pathway3.74E-04
45GO:0010027: thylakoid membrane organization3.76E-04
46GO:0031425: chloroplast RNA processing4.90E-04
47GO:0022622: root system development5.78E-04
48GO:0010182: sugar mediated signaling pathway7.93E-04
49GO:0016123: xanthophyll biosynthetic process8.50E-04
50GO:0005983: starch catabolic process8.74E-04
51GO:0010588: cotyledon vascular tissue pattern formation1.03E-03
52GO:0009959: negative gravitropism1.17E-03
53GO:0042793: transcription from plastid promoter1.17E-03
54GO:0016554: cytidine to uridine editing1.17E-03
55GO:0010020: chloroplast fission1.21E-03
56GO:0015904: tetracycline transport1.24E-03
57GO:2000905: negative regulation of starch metabolic process1.24E-03
58GO:0005991: trehalose metabolic process1.24E-03
59GO:0000305: response to oxygen radical1.24E-03
60GO:0000023: maltose metabolic process1.24E-03
61GO:0070509: calcium ion import1.24E-03
62GO:0044262: cellular carbohydrate metabolic process1.24E-03
63GO:0043266: regulation of potassium ion transport1.24E-03
64GO:0042659: regulation of cell fate specification1.24E-03
65GO:0010063: positive regulation of trichoblast fate specification1.24E-03
66GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process1.24E-03
67GO:0000025: maltose catabolic process1.24E-03
68GO:0010480: microsporocyte differentiation1.24E-03
69GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.24E-03
70GO:0042759: long-chain fatty acid biosynthetic process1.24E-03
71GO:0042371: vitamin K biosynthetic process1.24E-03
72GO:0043686: co-translational protein modification1.24E-03
73GO:2000021: regulation of ion homeostasis1.24E-03
74GO:0035987: endodermal cell differentiation1.24E-03
75GO:0005980: glycogen catabolic process1.24E-03
76GO:0030198: extracellular matrix organization1.24E-03
77GO:0090558: plant epidermis development1.24E-03
78GO:0043007: maintenance of rDNA1.24E-03
79GO:0051247: positive regulation of protein metabolic process1.24E-03
80GO:0046520: sphingoid biosynthetic process1.24E-03
81GO:1902458: positive regulation of stomatal opening1.24E-03
82GO:0006631: fatty acid metabolic process1.29E-03
83GO:0016042: lipid catabolic process1.36E-03
84GO:0042372: phylloquinone biosynthetic process1.55E-03
85GO:0030488: tRNA methylation1.55E-03
86GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.75E-03
87GO:0010098: suspensor development1.99E-03
88GO:0030307: positive regulation of cell growth1.99E-03
89GO:0032880: regulation of protein localization1.99E-03
90GO:2000070: regulation of response to water deprivation2.49E-03
91GO:1903426: regulation of reactive oxygen species biosynthetic process2.75E-03
92GO:0006568: tryptophan metabolic process2.75E-03
93GO:0009629: response to gravity2.75E-03
94GO:2000123: positive regulation of stomatal complex development2.75E-03
95GO:0010024: phytochromobilin biosynthetic process2.75E-03
96GO:0010275: NAD(P)H dehydrogenase complex assembly2.75E-03
97GO:0019388: galactose catabolic process2.75E-03
98GO:1900871: chloroplast mRNA modification2.75E-03
99GO:0006432: phenylalanyl-tRNA aminoacylation2.75E-03
100GO:0007154: cell communication2.75E-03
101GO:0071497: cellular response to freezing2.75E-03
102GO:1900033: negative regulation of trichome patterning2.75E-03
103GO:0042325: regulation of phosphorylation2.75E-03
104GO:0060359: response to ammonium ion2.75E-03
105GO:1904143: positive regulation of carotenoid biosynthetic process2.75E-03
106GO:0048255: mRNA stabilization2.75E-03
107GO:0080009: mRNA methylation2.75E-03
108GO:0009786: regulation of asymmetric cell division2.75E-03
109GO:1902326: positive regulation of chlorophyll biosynthetic process2.75E-03
110GO:0046740: transport of virus in host, cell to cell2.75E-03
111GO:0031648: protein destabilization2.75E-03
112GO:0001682: tRNA 5'-leader removal2.75E-03
113GO:0006423: cysteinyl-tRNA aminoacylation2.75E-03
114GO:0009790: embryo development2.76E-03
115GO:0009686: gibberellin biosynthetic process3.01E-03
116GO:0032544: plastid translation3.05E-03
117GO:0010497: plasmodesmata-mediated intercellular transport3.05E-03
118GO:0009657: plastid organization3.05E-03
119GO:0048527: lateral root development3.71E-03
120GO:0080022: primary root development4.13E-03
121GO:0009638: phototropism4.37E-03
122GO:0006779: porphyrin-containing compound biosynthetic process4.37E-03
123GO:0009098: leucine biosynthetic process4.37E-03
124GO:0010305: leaf vascular tissue pattern formation4.55E-03
125GO:0009741: response to brassinosteroid4.55E-03
126GO:0009958: positive gravitropism4.55E-03
127GO:0006662: glycerol ether metabolic process4.55E-03
128GO:0048586: regulation of long-day photoperiodism, flowering4.58E-03
129GO:0006954: inflammatory response4.58E-03
130GO:0033591: response to L-ascorbic acid4.58E-03
131GO:0090708: specification of plant organ axis polarity4.58E-03
132GO:0043157: response to cation stress4.58E-03
133GO:0071398: cellular response to fatty acid4.58E-03
134GO:0006788: heme oxidation4.58E-03
135GO:0009646: response to absence of light5.00E-03
136GO:0048829: root cap development5.12E-03
137GO:0006782: protoporphyrinogen IX biosynthetic process5.12E-03
138GO:0009641: shade avoidance5.12E-03
139GO:0009773: photosynthetic electron transport in photosystem I5.94E-03
140GO:0009926: auxin polar transport6.33E-03
141GO:0032502: developmental process6.52E-03
142GO:0010071: root meristem specification6.71E-03
143GO:0009052: pentose-phosphate shunt, non-oxidative branch6.71E-03
144GO:0007231: osmosensory signaling pathway6.71E-03
145GO:0010306: rhamnogalacturonan II biosynthetic process6.71E-03
146GO:0009102: biotin biosynthetic process6.71E-03
147GO:0006612: protein targeting to membrane6.71E-03
148GO:0010731: protein glutathionylation6.71E-03
149GO:0032456: endocytic recycling6.71E-03
150GO:0010601: positive regulation of auxin biosynthetic process6.71E-03
151GO:0010239: chloroplast mRNA processing6.71E-03
152GO:0009590: detection of gravity6.71E-03
153GO:0043572: plastid fission6.71E-03
154GO:0019048: modulation by virus of host morphology or physiology6.71E-03
155GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis6.71E-03
156GO:2001141: regulation of RNA biosynthetic process6.71E-03
157GO:0010321: regulation of vegetative phase change6.71E-03
158GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity6.71E-03
159GO:0031048: chromatin silencing by small RNA6.71E-03
160GO:1990019: protein storage vacuole organization6.71E-03
161GO:0010371: regulation of gibberellin biosynthetic process6.71E-03
162GO:0009828: plant-type cell wall loosening7.68E-03
163GO:0009725: response to hormone7.79E-03
164GO:0010628: positive regulation of gene expression7.79E-03
165GO:0006006: glucose metabolic process7.79E-03
166GO:0010102: lateral root morphogenesis7.79E-03
167GO:0006855: drug transmembrane transport8.03E-03
168GO:0010207: photosystem II assembly8.82E-03
169GO:0030104: water homeostasis9.12E-03
170GO:0033500: carbohydrate homeostasis9.12E-03
171GO:2000038: regulation of stomatal complex development9.12E-03
172GO:0042274: ribosomal small subunit biogenesis9.12E-03
173GO:0009765: photosynthesis, light harvesting9.12E-03
174GO:2000306: positive regulation of photomorphogenesis9.12E-03
175GO:0006221: pyrimidine nucleotide biosynthetic process9.12E-03
176GO:0009755: hormone-mediated signaling pathway9.12E-03
177GO:1901141: regulation of lignin biosynthetic process9.12E-03
178GO:0051567: histone H3-K9 methylation9.12E-03
179GO:0048629: trichome patterning9.12E-03
180GO:0008295: spermidine biosynthetic process9.12E-03
181GO:0010109: regulation of photosynthesis9.12E-03
182GO:0006749: glutathione metabolic process9.12E-03
183GO:0070588: calcium ion transmembrane transport9.92E-03
184GO:0080110: sporopollenin biosynthetic process1.18E-02
185GO:0045487: gibberellin catabolic process1.18E-02
186GO:0016131: brassinosteroid metabolic process1.18E-02
187GO:0010438: cellular response to sulfur starvation1.18E-02
188GO:0032543: mitochondrial translation1.18E-02
189GO:0010375: stomatal complex patterning1.18E-02
190GO:0010236: plastoquinone biosynthetic process1.18E-02
191GO:0045038: protein import into chloroplast thylakoid membrane1.18E-02
192GO:0048497: maintenance of floral organ identity1.18E-02
193GO:0031365: N-terminal protein amino acid modification1.18E-02
194GO:0016120: carotene biosynthetic process1.18E-02
195GO:0005992: trehalose biosynthetic process1.23E-02
196GO:0007275: multicellular organism development1.30E-02
197GO:0048367: shoot system development1.36E-02
198GO:0006508: proteolysis1.43E-02
199GO:0000741: karyogamy1.47E-02
200GO:0009913: epidermal cell differentiation1.47E-02
201GO:0006655: phosphatidylglycerol biosynthetic process1.47E-02
202GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.47E-02
203GO:1902456: regulation of stomatal opening1.47E-02
204GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.47E-02
205GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.47E-02
206GO:0033365: protein localization to organelle1.47E-02
207GO:0016458: gene silencing1.47E-02
208GO:0010405: arabinogalactan protein metabolic process1.47E-02
209GO:0032973: amino acid export1.47E-02
210GO:0018258: protein O-linked glycosylation via hydroxyproline1.47E-02
211GO:0006730: one-carbon metabolic process1.65E-02
212GO:0031930: mitochondria-nucleus signaling pathway1.78E-02
213GO:2000067: regulation of root morphogenesis1.78E-02
214GO:0009612: response to mechanical stimulus1.78E-02
215GO:0009082: branched-chain amino acid biosynthetic process1.78E-02
216GO:0006458: 'de novo' protein folding1.78E-02
217GO:0071333: cellular response to glucose stimulus1.78E-02
218GO:0017148: negative regulation of translation1.78E-02
219GO:0048280: vesicle fusion with Golgi apparatus1.78E-02
220GO:0048509: regulation of meristem development1.78E-02
221GO:0009099: valine biosynthetic process1.78E-02
222GO:0042026: protein refolding1.78E-02
223GO:0080086: stamen filament development1.78E-02
224GO:2000033: regulation of seed dormancy process1.78E-02
225GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.80E-02
226GO:0034599: cellular response to oxidative stress1.95E-02
227GO:0045454: cell redox homeostasis1.97E-02
228GO:0045892: negative regulation of transcription, DNA-templated2.03E-02
229GO:0006955: immune response2.12E-02
230GO:0048528: post-embryonic root development2.12E-02
231GO:0009772: photosynthetic electron transport in photosystem II2.12E-02
232GO:0043090: amino acid import2.12E-02
233GO:0000122: negative regulation of transcription from RNA polymerase II promoter2.12E-02
234GO:0010444: guard mother cell differentiation2.12E-02
235GO:0030497: fatty acid elongation2.12E-02
236GO:0010161: red light signaling pathway2.12E-02
237GO:0008284: positive regulation of cell proliferation2.13E-02
238GO:0006839: mitochondrial transport2.18E-02
239GO:0008033: tRNA processing2.31E-02
240GO:0010087: phloem or xylem histogenesis2.31E-02
241GO:0070413: trehalose metabolism in response to stress2.48E-02
242GO:0010439: regulation of glucosinolate biosynthetic process2.48E-02
243GO:0048564: photosystem I assembly2.48E-02
244GO:0006605: protein targeting2.48E-02
245GO:0010078: maintenance of root meristem identity2.48E-02
246GO:0009704: de-etiolation2.48E-02
247GO:0005978: glycogen biosynthetic process2.48E-02
248GO:0009819: drought recovery2.48E-02
249GO:0055075: potassium ion homeostasis2.48E-02
250GO:0000105: histidine biosynthetic process2.48E-02
251GO:0009231: riboflavin biosynthetic process2.48E-02
252GO:0010268: brassinosteroid homeostasis2.49E-02
253GO:0010197: polar nucleus fusion2.49E-02
254GO:0009640: photomorphogenesis2.55E-02
255GO:0010099: regulation of photomorphogenesis2.85E-02
256GO:0071482: cellular response to light stimulus2.85E-02
257GO:0015996: chlorophyll catabolic process2.85E-02
258GO:0009097: isoleucine biosynthetic process2.85E-02
259GO:0010100: negative regulation of photomorphogenesis2.85E-02
260GO:0006526: arginine biosynthetic process2.85E-02
261GO:0007186: G-protein coupled receptor signaling pathway2.85E-02
262GO:0043562: cellular response to nitrogen levels2.85E-02
263GO:0048825: cotyledon development2.88E-02
264GO:0007165: signal transduction3.01E-02
265GO:0006397: mRNA processing3.17E-02
266GO:0051865: protein autoubiquitination3.24E-02
267GO:0010206: photosystem II repair3.24E-02
268GO:0080144: amino acid homeostasis3.24E-02
269GO:0046685: response to arsenic-containing substance3.24E-02
270GO:0046916: cellular transition metal ion homeostasis3.24E-02
271GO:0006783: heme biosynthetic process3.24E-02
272GO:0000373: Group II intron splicing3.24E-02
273GO:0000902: cell morphogenesis3.24E-02
274GO:0048507: meristem development3.24E-02
275GO:0010583: response to cyclopentenone3.29E-02
276GO:0016032: viral process3.29E-02
277GO:0009664: plant-type cell wall organization3.39E-02
278GO:0048366: leaf development3.50E-02
279GO:1901657: glycosyl compound metabolic process3.51E-02
280GO:2000280: regulation of root development3.66E-02
281GO:0043067: regulation of programmed cell death3.66E-02
282GO:0009409: response to cold3.69E-02
283GO:0010252: auxin homeostasis3.74E-02
284GO:0006949: syncytium formation4.08E-02
285GO:0009299: mRNA transcription4.08E-02
286GO:0010629: negative regulation of gene expression4.08E-02
287GO:0010162: seed dormancy process4.08E-02
288GO:0030422: production of siRNA involved in RNA interference4.08E-02
289GO:0006896: Golgi to vacuole transport4.08E-02
290GO:0045036: protein targeting to chloroplast4.08E-02
291GO:0051607: defense response to virus4.21E-02
292GO:0006415: translational termination4.52E-02
293GO:0009684: indoleacetic acid biosynthetic process4.52E-02
294GO:0010015: root morphogenesis4.52E-02
295GO:0009073: aromatic amino acid family biosynthetic process4.52E-02
296GO:0043085: positive regulation of catalytic activity4.52E-02
297GO:0000038: very long-chain fatty acid metabolic process4.52E-02
298GO:0006352: DNA-templated transcription, initiation4.52E-02
299GO:0006816: calcium ion transport4.52E-02
300GO:0048229: gametophyte development4.52E-02
301GO:0009682: induced systemic resistance4.52E-02
302GO:0007166: cell surface receptor signaling pathway4.70E-02
303GO:0010029: regulation of seed germination4.71E-02
304GO:0005975: carbohydrate metabolic process4.86E-02
305GO:0012501: programmed cell death4.98E-02
306GO:0010105: negative regulation of ethylene-activated signaling pathway4.98E-02
307GO:0006820: anion transport4.98E-02
308GO:0016024: CDP-diacylglycerol biosynthetic process4.98E-02
309GO:0045037: protein import into chloroplast stroma4.98E-02
RankGO TermAdjusted P value
1GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity0.00E+00
2GO:0019144: ADP-sugar diphosphatase activity0.00E+00
3GO:0071633: dihydroceramidase activity0.00E+00
4GO:0005201: extracellular matrix structural constituent0.00E+00
5GO:0047341: fucose-1-phosphate guanylyltransferase activity0.00E+00
6GO:0004076: biotin synthase activity0.00E+00
7GO:0010349: L-galactose dehydrogenase activity0.00E+00
8GO:0004823: leucine-tRNA ligase activity0.00E+00
9GO:0005363: maltose transmembrane transporter activity0.00E+00
10GO:0047661: amino-acid racemase activity0.00E+00
11GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
12GO:0050201: fucokinase activity0.00E+00
13GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
14GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
15GO:0015267: channel activity0.00E+00
16GO:0045435: lycopene epsilon cyclase activity0.00E+00
17GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
18GO:0005504: fatty acid binding1.81E-04
19GO:0003723: RNA binding1.96E-04
20GO:0004519: endonuclease activity2.11E-04
21GO:0001872: (1->3)-beta-D-glucan binding3.56E-04
22GO:0043023: ribosomal large subunit binding3.56E-04
23GO:0045430: chalcone isomerase activity5.78E-04
24GO:0016279: protein-lysine N-methyltransferase activity5.78E-04
25GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.24E-03
26GO:0010313: phytochrome binding1.24E-03
27GO:0051777: ent-kaurenoate oxidase activity1.24E-03
28GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.24E-03
29GO:0000170: sphingosine hydroxylase activity1.24E-03
30GO:0004856: xylulokinase activity1.24E-03
31GO:0050139: nicotinate-N-glucosyltransferase activity1.24E-03
32GO:0004134: 4-alpha-glucanotransferase activity1.24E-03
33GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.24E-03
34GO:0004645: phosphorylase activity1.24E-03
35GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.24E-03
36GO:0009374: biotin binding1.24E-03
37GO:0004425: indole-3-glycerol-phosphate synthase activity1.24E-03
38GO:0019203: carbohydrate phosphatase activity1.24E-03
39GO:0008395: steroid hydroxylase activity1.24E-03
40GO:0008184: glycogen phosphorylase activity1.24E-03
41GO:0005080: protein kinase C binding1.24E-03
42GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.24E-03
43GO:0042834: peptidoglycan binding1.24E-03
44GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.24E-03
45GO:0080042: ADP-glucose pyrophosphohydrolase activity1.24E-03
46GO:0050308: sugar-phosphatase activity1.24E-03
47GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity1.24E-03
48GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity1.24E-03
49GO:0042586: peptide deformylase activity1.24E-03
50GO:0052381: tRNA dimethylallyltransferase activity1.24E-03
51GO:0005528: FK506 binding1.85E-03
52GO:0004176: ATP-dependent peptidase activity2.38E-03
53GO:1901981: phosphatidylinositol phosphate binding2.75E-03
54GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity2.75E-03
55GO:0080097: L-tryptophan:pyruvate aminotransferase activity2.75E-03
56GO:0016630: protochlorophyllide reductase activity2.75E-03
57GO:0004766: spermidine synthase activity2.75E-03
58GO:0004614: phosphoglucomutase activity2.75E-03
59GO:0004817: cysteine-tRNA ligase activity2.75E-03
60GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity2.75E-03
61GO:0004750: ribulose-phosphate 3-epimerase activity2.75E-03
62GO:0008805: carbon-monoxide oxygenase activity2.75E-03
63GO:0042284: sphingolipid delta-4 desaturase activity2.75E-03
64GO:0017118: lipoyltransferase activity2.75E-03
65GO:0004362: glutathione-disulfide reductase activity2.75E-03
66GO:0008493: tetracycline transporter activity2.75E-03
67GO:0004826: phenylalanine-tRNA ligase activity2.75E-03
68GO:0003852: 2-isopropylmalate synthase activity2.75E-03
69GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity2.75E-03
70GO:0045543: gibberellin 2-beta-dioxygenase activity2.75E-03
71GO:0080041: ADP-ribose pyrophosphohydrolase activity2.75E-03
72GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.75E-03
73GO:0043425: bHLH transcription factor binding2.75E-03
74GO:0015238: drug transmembrane transporter activity3.19E-03
75GO:0047134: protein-disulfide reductase activity3.73E-03
76GO:0015462: ATPase-coupled protein transmembrane transporter activity4.58E-03
77GO:0004180: carboxypeptidase activity4.58E-03
78GO:0045174: glutathione dehydrogenase (ascorbate) activity4.58E-03
79GO:0070330: aromatase activity4.58E-03
80GO:0016805: dipeptidase activity4.58E-03
81GO:0003913: DNA photolyase activity4.58E-03
82GO:0002161: aminoacyl-tRNA editing activity4.58E-03
83GO:0004148: dihydrolipoyl dehydrogenase activity4.58E-03
84GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor4.58E-03
85GO:0004791: thioredoxin-disulfide reductase activity5.00E-03
86GO:0052689: carboxylic ester hydrolase activity6.01E-03
87GO:0016851: magnesium chelatase activity6.71E-03
88GO:0052655: L-valine transaminase activity6.71E-03
89GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity6.71E-03
90GO:0016149: translation release factor activity, codon specific6.71E-03
91GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity6.71E-03
92GO:0052656: L-isoleucine transaminase activity6.71E-03
93GO:0052654: L-leucine transaminase activity6.71E-03
94GO:0009041: uridylate kinase activity6.71E-03
95GO:0035197: siRNA binding6.71E-03
96GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.09E-03
97GO:0005262: calcium channel activity7.79E-03
98GO:0031072: heat shock protein binding7.79E-03
99GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.03E-03
100GO:0008237: metallopeptidase activity8.31E-03
101GO:0008083: growth factor activity8.82E-03
102GO:0008266: poly(U) RNA binding8.82E-03
103GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed9.12E-03
104GO:0004392: heme oxygenase (decyclizing) activity9.12E-03
105GO:0016987: sigma factor activity9.12E-03
106GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity9.12E-03
107GO:0046556: alpha-L-arabinofuranosidase activity9.12E-03
108GO:0004335: galactokinase activity9.12E-03
109GO:0004084: branched-chain-amino-acid transaminase activity9.12E-03
110GO:0004659: prenyltransferase activity9.12E-03
111GO:0019199: transmembrane receptor protein kinase activity9.12E-03
112GO:0001053: plastid sigma factor activity9.12E-03
113GO:0016788: hydrolase activity, acting on ester bonds9.51E-03
114GO:0016298: lipase activity1.06E-02
115GO:0003959: NADPH dehydrogenase activity1.18E-02
116GO:0018685: alkane 1-monooxygenase activity1.18E-02
117GO:0016846: carbon-sulfur lyase activity1.18E-02
118GO:0016773: phosphotransferase activity, alcohol group as acceptor1.18E-02
119GO:0003989: acetyl-CoA carboxylase activity1.18E-02
120GO:2001070: starch binding1.47E-02
121GO:0080030: methyl indole-3-acetate esterase activity1.47E-02
122GO:1990714: hydroxyproline O-galactosyltransferase activity1.47E-02
123GO:0016208: AMP binding1.47E-02
124GO:0004526: ribonuclease P activity1.47E-02
125GO:0004462: lactoylglutathione lyase activity1.47E-02
126GO:0004709: MAP kinase kinase kinase activity1.47E-02
127GO:0004629: phospholipase C activity1.47E-02
128GO:0035673: oligopeptide transmembrane transporter activity1.47E-02
129GO:0004222: metalloendopeptidase activity1.55E-02
130GO:0008195: phosphatidate phosphatase activity1.78E-02
131GO:0004435: phosphatidylinositol phospholipase C activity1.78E-02
132GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.78E-02
133GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.78E-02
134GO:0016832: aldehyde-lyase activity1.78E-02
135GO:0015035: protein disulfide oxidoreductase activity1.80E-02
136GO:0003727: single-stranded RNA binding1.97E-02
137GO:0004871: signal transducer activity2.16E-02
138GO:0003824: catalytic activity2.18E-02
139GO:0004033: aldo-keto reductase (NADP) activity2.48E-02
140GO:0001085: RNA polymerase II transcription factor binding2.49E-02
141GO:0043621: protein self-association2.82E-02
142GO:0035091: phosphatidylinositol binding2.82E-02
143GO:0046914: transition metal ion binding2.85E-02
144GO:0008173: RNA methyltransferase activity2.85E-02
145GO:0008138: protein tyrosine/serine/threonine phosphatase activity3.24E-02
146GO:0008889: glycerophosphodiester phosphodiesterase activity3.24E-02
147GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity3.24E-02
148GO:0003747: translation release factor activity3.24E-02
149GO:0016787: hydrolase activity3.25E-02
150GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.50E-02
151GO:0015297: antiporter activity3.62E-02
152GO:0008047: enzyme activator activity4.08E-02
153GO:0015020: glucuronosyltransferase activity4.08E-02
154GO:0004805: trehalose-phosphatase activity4.08E-02
155GO:0030234: enzyme regulator activity4.08E-02
156GO:0015171: amino acid transmembrane transporter activity4.20E-02
157GO:0044183: protein binding involved in protein folding4.52E-02
158GO:0047372: acylglycerol lipase activity4.52E-02
159GO:0008559: xenobiotic-transporting ATPase activity4.52E-02
160GO:0005215: transporter activity4.57E-02
161GO:0000976: transcription regulatory region sequence-specific DNA binding4.98E-02
162GO:0004521: endoribonuclease activity4.98E-02
163GO:0015198: oligopeptide transporter activity4.98E-02
164GO:0000049: tRNA binding4.98E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast4.31E-30
2GO:0009570: chloroplast stroma5.32E-20
3GO:0009941: chloroplast envelope1.16E-10
4GO:0009508: plastid chromosome2.29E-07
5GO:0009295: nucleoid3.30E-06
6GO:0009534: chloroplast thylakoid2.17E-05
7GO:0031969: chloroplast membrane5.26E-04
8GO:0009535: chloroplast thylakoid membrane5.28E-04
9GO:0009543: chloroplast thylakoid lumen5.53E-04
10GO:0009536: plastid5.57E-04
11GO:0032541: cortical endoplasmic reticulum1.24E-03
12GO:0010319: stromule1.63E-03
13GO:0030529: intracellular ribonucleoprotein complex1.95E-03
14GO:0009501: amyloplast2.49E-03
15GO:0000427: plastid-encoded plastid RNA polymerase complex2.75E-03
16GO:0031357: integral component of chloroplast inner membrane2.75E-03
17GO:0009579: thylakoid4.19E-03
18GO:0009317: acetyl-CoA carboxylase complex4.58E-03
19GO:0009528: plastid inner membrane4.58E-03
20GO:0019897: extrinsic component of plasma membrane4.58E-03
21GO:0010007: magnesium chelatase complex4.58E-03
22GO:0030139: endocytic vesicle4.58E-03
23GO:0031977: thylakoid lumen5.59E-03
24GO:0005719: nuclear euchromatin6.71E-03
25GO:0042646: plastid nucleoid6.71E-03
26GO:0032585: multivesicular body membrane6.71E-03
27GO:0009527: plastid outer membrane9.12E-03
28GO:0009898: cytoplasmic side of plasma membrane9.12E-03
29GO:0009544: chloroplast ATP synthase complex9.12E-03
30GO:0005886: plasma membrane1.07E-02
31GO:0009707: chloroplast outer membrane1.36E-02
32GO:0009654: photosystem II oxygen evolving complex1.37E-02
33GO:0043231: intracellular membrane-bounded organelle1.39E-02
34GO:0009706: chloroplast inner membrane1.72E-02
35GO:0005655: nucleolar ribonuclease P complex1.78E-02
36GO:0015629: actin cytoskeleton1.80E-02
37GO:0046658: anchored component of plasma membrane2.04E-02
38GO:0009533: chloroplast stromal thylakoid2.12E-02
39GO:0009986: cell surface2.12E-02
40GO:0048226: Casparian strip2.48E-02
41GO:0012507: ER to Golgi transport vesicle membrane2.48E-02
42GO:0019898: extrinsic component of membrane2.88E-02
43GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.24E-02
44GO:0042644: chloroplast nucleoid3.24E-02
45GO:0015030: Cajal body3.66E-02
46GO:0000418: DNA-directed RNA polymerase IV complex4.08E-02
47GO:0031225: anchored component of membrane4.24E-02
48GO:0090404: pollen tube tip4.52E-02
49GO:0000159: protein phosphatase type 2A complex4.52E-02
50GO:0005667: transcription factor complex4.96E-02
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Gene type



Gene DE type