co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G57880

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
3	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
4	GO:0033587: shikimate biosynthetic process	0.00E+00
5	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
6	GO:0032491: detection of molecule of fungal origin	0.00E+00
7	GO:0010324: membrane invagination	0.00E+00
8	GO:0032499: detection of peptidoglycan	0.00E+00
9	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
10	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
11	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
12	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
13	GO:0045227: capsule polysaccharide biosynthetic process	5.13E-05
14	GO:0033358: UDP-L-arabinose biosynthetic process	5.13E-05
15	GO:0009737: response to abscisic acid	5.98E-05
16	GO:0009643: photosynthetic acclimation	1.18E-04
17	GO:0015760: glucose-6-phosphate transport	2.77E-04
18	GO:0019567: arabinose biosynthetic process	2.77E-04
19	GO:0015969: guanosine tetraphosphate metabolic process	2.77E-04
20	GO:0006470: protein dephosphorylation	2.79E-04
21	GO:0009751: response to salicylic acid	3.10E-04
22	GO:0009753: response to jasmonic acid	3.71E-04
23	GO:0010112: regulation of systemic acquired resistance	3.99E-04
24	GO:0002240: response to molecule of oomycetes origin	6.09E-04
25	GO:0044419: interspecies interaction between organisms	6.09E-04
26	GO:0009727: detection of ethylene stimulus	6.09E-04
27	GO:0015712: hexose phosphate transport	6.09E-04
28	GO:0051258: protein polymerization	6.09E-04
29	GO:0010115: regulation of abscisic acid biosynthetic process	6.09E-04
30	GO:0043066: negative regulation of apoptotic process	6.09E-04
31	GO:0015865: purine nucleotide transport	6.09E-04
32	GO:0010271: regulation of chlorophyll catabolic process	6.09E-04
33	GO:0019725: cellular homeostasis	6.09E-04
34	GO:0009446: putrescine biosynthetic process	6.09E-04
35	GO:0010155: regulation of proton transport	6.09E-04
36	GO:0006527: arginine catabolic process	6.09E-04
37	GO:0080181: lateral root branching	6.09E-04
38	GO:0010200: response to chitin	7.61E-04
39	GO:2000028: regulation of photoperiodism, flowering	8.26E-04
40	GO:0015714: phosphoenolpyruvate transport	9.88E-04
41	GO:0080168: abscisic acid transport	9.88E-04
42	GO:0006954: inflammatory response	9.88E-04
43	GO:0034051: negative regulation of plant-type hypersensitive response	9.88E-04
44	GO:0035436: triose phosphate transmembrane transport	9.88E-04
45	GO:0045836: positive regulation of meiotic nuclear division	9.88E-04
46	GO:0015692: lead ion transport	9.88E-04
47	GO:0015695: organic cation transport	9.88E-04
48	GO:0010498: proteasomal protein catabolic process	9.88E-04
49	GO:0009225: nucleotide-sugar metabolic process	1.04E-03
50	GO:0009611: response to wounding	1.07E-03
51	GO:0010150: leaf senescence	1.22E-03
52	GO:0042742: defense response to bacterium	1.23E-03
53	GO:0006897: endocytosis	1.26E-03
54	GO:0010731: protein glutathionylation	1.41E-03
55	GO:0009408: response to heat	1.41E-03
56	GO:0015696: ammonium transport	1.41E-03
57	GO:0071323: cellular response to chitin	1.41E-03
58	GO:0006986: response to unfolded protein	1.41E-03
59	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.41E-03
60	GO:0048194: Golgi vesicle budding	1.41E-03
61	GO:0046902: regulation of mitochondrial membrane permeability	1.41E-03
62	GO:0072583: clathrin-dependent endocytosis	1.41E-03
63	GO:0006468: protein phosphorylation	1.50E-03
64	GO:0031348: negative regulation of defense response	1.68E-03
65	GO:0071456: cellular response to hypoxia	1.68E-03
66	GO:0006012: galactose metabolic process	1.83E-03
67	GO:0015713: phosphoglycerate transport	1.89E-03
68	GO:0008295: spermidine biosynthetic process	1.89E-03
69	GO:0071219: cellular response to molecule of bacterial origin	1.89E-03
70	GO:0009694: jasmonic acid metabolic process	1.89E-03
71	GO:0010109: regulation of photosynthesis	1.89E-03
72	GO:0060548: negative regulation of cell death	1.89E-03
73	GO:0072488: ammonium transmembrane transport	1.89E-03
74	GO:0009306: protein secretion	1.99E-03
75	GO:0042391: regulation of membrane potential	2.33E-03
76	GO:0030041: actin filament polymerization	2.41E-03
77	GO:0009435: NAD biosynthetic process	2.41E-03
78	GO:0018344: protein geranylgeranylation	2.41E-03
79	GO:0009247: glycolipid biosynthetic process	2.41E-03
80	GO:0045927: positive regulation of growth	2.41E-03
81	GO:0034052: positive regulation of plant-type hypersensitive response	2.41E-03
82	GO:0009749: response to glucose	2.89E-03
83	GO:0033365: protein localization to organelle	2.98E-03
84	GO:0006596: polyamine biosynthetic process	2.98E-03
85	GO:0002238: response to molecule of fungal origin	2.98E-03
86	GO:0048317: seed morphogenesis	2.98E-03
87	GO:0010193: response to ozone	3.09E-03
88	GO:0009624: response to nematode	3.19E-03
89	GO:0045926: negative regulation of growth	3.58E-03
90	GO:0071470: cellular response to osmotic stress	3.58E-03
91	GO:0046777: protein autophosphorylation	3.65E-03
92	GO:0006904: vesicle docking involved in exocytosis	3.98E-03
93	GO:1902074: response to salt	4.23E-03
94	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.73E-03
95	GO:0043068: positive regulation of programmed cell death	4.90E-03
96	GO:0019375: galactolipid biosynthetic process	4.90E-03
97	GO:0045010: actin nucleation	4.90E-03
98	GO:0010928: regulation of auxin mediated signaling pathway	4.90E-03
99	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.90E-03
100	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.90E-03
101	GO:0009819: drought recovery	4.90E-03
102	GO:0010204: defense response signaling pathway, resistance gene-independent	5.62E-03
103	GO:0030968: endoplasmic reticulum unfolded protein response	5.62E-03
104	GO:0010208: pollen wall assembly	5.62E-03
105	GO:0006098: pentose-phosphate shunt	6.37E-03
106	GO:0010119: regulation of stomatal movement	6.75E-03
107	GO:0010380: regulation of chlorophyll biosynthetic process	7.15E-03
108	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.15E-03
109	GO:0008202: steroid metabolic process	7.15E-03
110	GO:0048268: clathrin coat assembly	7.15E-03
111	GO:0009409: response to cold	7.46E-03
112	GO:0007166: cell surface receptor signaling pathway	7.58E-03
113	GO:0006032: chitin catabolic process	7.97E-03
114	GO:0006952: defense response	8.63E-03
115	GO:0006887: exocytosis	8.79E-03
116	GO:0009089: lysine biosynthetic process via diaminopimelate	8.82E-03
117	GO:0009682: induced systemic resistance	8.82E-03
118	GO:0051707: response to other organism	9.55E-03
119	GO:0000266: mitochondrial fission	9.70E-03
120	GO:0018107: peptidyl-threonine phosphorylation	1.06E-02
121	GO:0055046: microgametogenesis	1.06E-02
122	GO:0006855: drug transmembrane transport	1.12E-02
123	GO:0009266: response to temperature stimulus	1.16E-02
124	GO:0034605: cellular response to heat	1.16E-02
125	GO:0002237: response to molecule of bacterial origin	1.16E-02
126	GO:0006970: response to osmotic stress	1.23E-02
127	GO:0046854: phosphatidylinositol phosphorylation	1.25E-02
128	GO:0080188: RNA-directed DNA methylation	1.25E-02
129	GO:0010167: response to nitrate	1.25E-02
130	GO:0009901: anther dehiscence	1.25E-02
131	GO:0034976: response to endoplasmic reticulum stress	1.35E-02
132	GO:0016567: protein ubiquitination	1.37E-02
133	GO:0080147: root hair cell development	1.46E-02
134	GO:2000377: regulation of reactive oxygen species metabolic process	1.46E-02
135	GO:0009863: salicylic acid mediated signaling pathway	1.46E-02
136	GO:0080167: response to karrikin	1.47E-02
137	GO:0035556: intracellular signal transduction	1.54E-02
138	GO:0006874: cellular calcium ion homeostasis	1.56E-02
139	GO:0051321: meiotic cell cycle	1.67E-02
140	GO:0016998: cell wall macromolecule catabolic process	1.67E-02
141	GO:0071369: cellular response to ethylene stimulus	1.89E-02
142	GO:0018105: peptidyl-serine phosphorylation	1.90E-02
143	GO:0009561: megagametogenesis	2.01E-02
144	GO:0010584: pollen exine formation	2.01E-02
145	GO:0055085: transmembrane transport	2.03E-02
146	GO:0006885: regulation of pH	2.37E-02
147	GO:0009960: endosperm development	2.37E-02
148	GO:0009845: seed germination	2.50E-02
149	GO:0002229: defense response to oomycetes	2.76E-02
150	GO:0071554: cell wall organization or biogenesis	2.76E-02
151	GO:0016036: cellular response to phosphate starvation	2.97E-02
152	GO:0010029: regulation of seed germination	3.73E-02
153	GO:0006906: vesicle fusion	3.87E-02
154	GO:0009414: response to water deprivation	3.89E-02
155	GO:0006950: response to stress	4.02E-02
156	GO:0009817: defense response to fungus, incompatible interaction	4.33E-02
157	GO:0010311: lateral root formation	4.48E-02
158	GO:0009832: plant-type cell wall biogenesis	4.48E-02
159	GO:0007165: signal transduction	4.53E-02
160	GO:0006499: N-terminal protein myristoylation	4.64E-02
161	GO:0009407: toxin catabolic process	4.64E-02
162	GO:0009631: cold acclimation	4.79E-02
163	GO:0010043: response to zinc ion	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
5	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
6	GO:0008734: L-aspartate oxidase activity	0.00E+00
7	GO:0080131: hydroxyjasmonate sulfotransferase activity	0.00E+00
8	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	7.82E-07
9	GO:0050373: UDP-arabinose 4-epimerase activity	5.13E-05
10	GO:0005524: ATP binding	8.38E-05
11	GO:0016301: kinase activity	1.21E-04
12	GO:0004012: phospholipid-translocating ATPase activity	1.62E-04
13	GO:0003978: UDP-glucose 4-epimerase activity	1.62E-04
14	GO:0008792: arginine decarboxylase activity	2.77E-04
15	GO:0046481: digalactosyldiacylglycerol synthase activity	2.77E-04
16	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.77E-04
17	GO:0032050: clathrin heavy chain binding	2.77E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.77E-04
19	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.77E-04
20	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.40E-04
21	GO:0004568: chitinase activity	5.52E-04
22	GO:0048531: beta-1,3-galactosyltransferase activity	6.09E-04
23	GO:0015036: disulfide oxidoreductase activity	6.09E-04
24	GO:0008728: GTP diphosphokinase activity	6.09E-04
25	GO:0015152: glucose-6-phosphate transmembrane transporter activity	6.09E-04
26	GO:0008559: xenobiotic-transporting ATPase activity	6.38E-04
27	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.26E-04
28	GO:0004674: protein serine/threonine kinase activity	9.73E-04
29	GO:0071917: triose-phosphate transmembrane transporter activity	9.88E-04
30	GO:0030552: cAMP binding	1.04E-03
31	GO:0030553: cGMP binding	1.04E-03
32	GO:0004722: protein serine/threonine phosphatase activity	1.15E-03
33	GO:0005216: ion channel activity	1.40E-03
34	GO:0035250: UDP-galactosyltransferase activity	1.41E-03
35	GO:0019199: transmembrane receptor protein kinase activity	1.89E-03
36	GO:0015120: phosphoglycerate transmembrane transporter activity	1.89E-03
37	GO:0005249: voltage-gated potassium channel activity	2.33E-03
38	GO:0030551: cyclic nucleotide binding	2.33E-03
39	GO:0005496: steroid binding	2.41E-03
40	GO:0005471: ATP:ADP antiporter activity	2.41E-03
41	GO:0004842: ubiquitin-protein transferase activity	2.51E-03
42	GO:0019901: protein kinase binding	2.89E-03
43	GO:0008519: ammonium transmembrane transporter activity	2.98E-03
44	GO:0005509: calcium ion binding	3.51E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	3.58E-03
46	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.58E-03
47	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.90E-03
48	GO:0008375: acetylglucosaminyltransferase activity	4.99E-03
49	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.62E-03
50	GO:0008142: oxysterol binding	5.62E-03
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.84E-03
52	GO:0005545: 1-phosphatidylinositol binding	7.97E-03
53	GO:0005543: phospholipid binding	8.82E-03
54	GO:0005315: inorganic phosphate transmembrane transporter activity	1.06E-02
55	GO:0031072: heat shock protein binding	1.06E-02
56	GO:0008146: sulfotransferase activity	1.25E-02
57	GO:0005217: intracellular ligand-gated ion channel activity	1.25E-02
58	GO:0008061: chitin binding	1.25E-02
59	GO:0004970: ionotropic glutamate receptor activity	1.25E-02
60	GO:0004190: aspartic-type endopeptidase activity	1.25E-02
61	GO:0001046: core promoter sequence-specific DNA binding	1.46E-02
62	GO:0031418: L-ascorbic acid binding	1.46E-02
63	GO:0033612: receptor serine/threonine kinase binding	1.67E-02
64	GO:0005451: monovalent cation:proton antiporter activity	2.25E-02
65	GO:0005199: structural constituent of cell wall	2.37E-02
66	GO:0030276: clathrin binding	2.37E-02
67	GO:0015299: solute:proton antiporter activity	2.50E-02
68	GO:0005516: calmodulin binding	2.61E-02
69	GO:0005515: protein binding	2.71E-02
70	GO:0004197: cysteine-type endopeptidase activity	2.89E-02
71	GO:0015385: sodium:proton antiporter activity	3.02E-02
72	GO:0015297: antiporter activity	3.04E-02
73	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.30E-02
74	GO:0008483: transaminase activity	3.30E-02
75	GO:0016413: O-acetyltransferase activity	3.44E-02
76	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.87E-02
77	GO:0043565: sequence-specific DNA binding	3.97E-02
78	GO:0030247: polysaccharide binding	4.02E-02
79	GO:0004721: phosphoprotein phosphatase activity	4.02E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	4.02E-02
81	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.33E-02
82	GO:0015238: drug transmembrane transporter activity	4.48E-02
83	GO:0000287: magnesium ion binding	4.81E-02
84	GO:0046982: protein heterodimerization activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.32E-06
2	GO:0016021: integral component of membrane	1.43E-05
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.77E-04
4	GO:0031314: extrinsic component of mitochondrial inner membrane	6.09E-04
5	GO:0005901: caveola	6.09E-04
6	GO:0008287: protein serine/threonine phosphatase complex	9.88E-04
7	GO:0009530: primary cell wall	9.88E-04
8	GO:0032580: Golgi cisterna membrane	3.75E-03
9	GO:0000325: plant-type vacuole	6.75E-03
10	GO:0015030: Cajal body	7.15E-03
11	GO:0030125: clathrin vesicle coat	7.97E-03
12	GO:0005740: mitochondrial envelope	7.97E-03
13	GO:0048471: perinuclear region of cytoplasm	8.82E-03
14	GO:0005789: endoplasmic reticulum membrane	9.44E-03
15	GO:0005578: proteinaceous extracellular matrix	1.06E-02
16	GO:0031012: extracellular matrix	1.06E-02
17	GO:0005795: Golgi stack	1.25E-02
18	GO:0005741: mitochondrial outer membrane	1.67E-02
19	GO:0005905: clathrin-coated pit	1.67E-02
20	GO:0030136: clathrin-coated vesicle	2.13E-02
21	GO:0005743: mitochondrial inner membrane	2.19E-02
22	GO:0005770: late endosome	2.37E-02
23	GO:0000145: exocyst	2.89E-02
24	GO:0005887: integral component of plasma membrane	3.51E-02
25	GO:0005794: Golgi apparatus	3.71E-02
26	GO:0009707: chloroplast outer membrane	4.33E-02
27	GO:0000786: nucleosome	4.95E-02