Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071985: multivesicular body sorting pathway0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
4GO:0018063: cytochrome c-heme linkage0.00E+00
5GO:0010482: regulation of epidermal cell division6.10E-05
6GO:1900384: regulation of flavonol biosynthetic process6.10E-05
7GO:0032107: regulation of response to nutrient levels6.10E-05
8GO:1990641: response to iron ion starvation6.10E-05
9GO:0010230: alternative respiration6.10E-05
10GO:0051707: response to other organism8.95E-05
11GO:0000719: photoreactive repair1.48E-04
12GO:0006101: citrate metabolic process1.48E-04
13GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.48E-04
14GO:0019374: galactolipid metabolic process1.48E-04
15GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex1.48E-04
16GO:0006048: UDP-N-acetylglucosamine biosynthetic process2.51E-04
17GO:0055089: fatty acid homeostasis3.65E-04
18GO:0006020: inositol metabolic process3.65E-04
19GO:0051567: histone H3-K9 methylation4.88E-04
20GO:0046283: anthocyanin-containing compound metabolic process6.19E-04
21GO:0006097: glyoxylate cycle6.19E-04
22GO:0006777: Mo-molybdopterin cofactor biosynthetic process7.57E-04
23GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.05E-03
24GO:2000014: regulation of endosperm development1.05E-03
25GO:0045010: actin nucleation1.21E-03
26GO:0006102: isocitrate metabolic process1.21E-03
27GO:0006644: phospholipid metabolic process1.21E-03
28GO:0009636: response to toxic substance1.36E-03
29GO:0017004: cytochrome complex assembly1.38E-03
30GO:0010112: regulation of systemic acquired resistance1.55E-03
31GO:0000902: cell morphogenesis1.55E-03
32GO:0007338: single fertilization1.55E-03
33GO:0008202: steroid metabolic process1.73E-03
34GO:0009688: abscisic acid biosynthetic process1.92E-03
35GO:0016441: posttranscriptional gene silencing1.92E-03
36GO:0048765: root hair cell differentiation2.12E-03
37GO:0006890: retrograde vesicle-mediated transport, Golgi to ER2.32E-03
38GO:0045037: protein import into chloroplast stroma2.32E-03
39GO:0015031: protein transport2.46E-03
40GO:0007015: actin filament organization2.74E-03
41GO:0090351: seedling development2.96E-03
42GO:0007033: vacuole organization2.96E-03
43GO:0009225: nucleotide-sugar metabolic process2.96E-03
44GO:0006636: unsaturated fatty acid biosynthetic process3.18E-03
45GO:0051302: regulation of cell division3.65E-03
46GO:0010026: trichome differentiation3.65E-03
47GO:0040008: regulation of growth3.76E-03
48GO:0009269: response to desiccation3.89E-03
49GO:0010150: leaf senescence3.93E-03
50GO:0009411: response to UV4.40E-03
51GO:0042147: retrograde transport, endosome to Golgi4.92E-03
52GO:0010118: stomatal movement5.19E-03
53GO:0010182: sugar mediated signaling pathway5.46E-03
54GO:0048868: pollen tube development5.46E-03
55GO:0009960: endosperm development5.46E-03
56GO:0006623: protein targeting to vacuole6.03E-03
57GO:0006891: intra-Golgi vesicle-mediated transport6.32E-03
58GO:0071554: cell wall organization or biogenesis6.32E-03
59GO:0009567: double fertilization forming a zygote and endosperm7.21E-03
60GO:0051607: defense response to virus7.84E-03
61GO:0016192: vesicle-mediated transport7.91E-03
62GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.48E-03
63GO:0009627: systemic acquired resistance8.81E-03
64GO:0006906: vesicle fusion8.81E-03
65GO:0006888: ER to Golgi vesicle-mediated transport9.14E-03
66GO:0009407: toxin catabolic process1.05E-02
67GO:0048527: lateral root development1.09E-02
68GO:0006099: tricarboxylic acid cycle1.20E-02
69GO:0006887: exocytosis1.31E-02
70GO:0042546: cell wall biogenesis1.43E-02
71GO:0000209: protein polyubiquitination1.43E-02
72GO:0009965: leaf morphogenesis1.51E-02
73GO:0006855: drug transmembrane transport1.55E-02
74GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.59E-02
75GO:0009736: cytokinin-activated signaling pathway1.71E-02
76GO:0009738: abscisic acid-activated signaling pathway1.91E-02
77GO:0048367: shoot system development1.97E-02
78GO:0009620: response to fungus2.06E-02
79GO:0006457: protein folding2.56E-02
80GO:0006633: fatty acid biosynthetic process3.04E-02
81GO:0010228: vegetative to reproductive phase transition of meristem3.36E-02
82GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.52E-02
83GO:0006970: response to osmotic stress4.67E-02
RankGO TermAdjusted P value
1GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0032266: phosphatidylinositol-3-phosphate binding6.10E-05
4GO:0047940: glucuronokinase activity6.10E-05
5GO:0009000: selenocysteine lyase activity6.10E-05
6GO:0003994: aconitate hydratase activity1.48E-04
7GO:0032934: sterol binding1.48E-04
8GO:0008265: Mo-molybdopterin cofactor sulfurase activity2.51E-04
9GO:0043169: cation binding2.51E-04
10GO:0050662: coenzyme binding3.60E-04
11GO:0035529: NADH pyrophosphatase activity3.65E-04
12GO:0050378: UDP-glucuronate 4-epimerase activity4.88E-04
13GO:0045300: acyl-[acyl-carrier-protein] desaturase activity6.19E-04
14GO:0047631: ADP-ribose diphosphatase activity6.19E-04
15GO:0030151: molybdenum ion binding6.19E-04
16GO:0016773: phosphotransferase activity, alcohol group as acceptor6.19E-04
17GO:0000210: NAD+ diphosphatase activity7.57E-04
18GO:0008320: protein transmembrane transporter activity1.05E-03
19GO:0004620: phospholipase activity1.05E-03
20GO:0008142: oxysterol binding1.38E-03
21GO:0047617: acyl-CoA hydrolase activity1.73E-03
22GO:0004022: alcohol dehydrogenase (NAD) activity2.52E-03
23GO:0008266: poly(U) RNA binding2.74E-03
24GO:0043130: ubiquitin binding3.42E-03
25GO:0001046: core promoter sequence-specific DNA binding3.42E-03
26GO:0004499: N,N-dimethylaniline monooxygenase activity4.65E-03
27GO:0016413: O-acetyltransferase activity7.84E-03
28GO:0004806: triglyceride lipase activity9.14E-03
29GO:0015238: drug transmembrane transporter activity1.02E-02
30GO:0003924: GTPase activity1.11E-02
31GO:0000149: SNARE binding1.23E-02
32GO:0050661: NADP binding1.27E-02
33GO:0051539: 4 iron, 4 sulfur cluster binding1.27E-02
34GO:0004364: glutathione transferase activity1.35E-02
35GO:0005484: SNAP receptor activity1.39E-02
36GO:0051287: NAD binding1.59E-02
37GO:0016874: ligase activity2.11E-02
38GO:0016787: hydrolase activity2.23E-02
39GO:0016829: lyase activity2.73E-02
40GO:0030170: pyridoxal phosphate binding2.78E-02
41GO:0004252: serine-type endopeptidase activity2.78E-02
42GO:0046872: metal ion binding2.86E-02
43GO:0015297: antiporter activity3.14E-02
44GO:0005525: GTP binding3.25E-02
45GO:0005215: transporter activity4.41E-02
46GO:0050660: flavin adenine dinucleotide binding4.91E-02
RankGO TermAdjusted P value
1GO:0000814: ESCRT II complex1.48E-04
2GO:0042406: extrinsic component of endoplasmic reticulum membrane2.51E-04
3GO:0032580: Golgi cisterna membrane4.99E-04
4GO:0005885: Arp2/3 protein complex9.01E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane1.05E-03
6GO:0008540: proteasome regulatory particle, base subcomplex1.73E-03
7GO:0005769: early endosome3.18E-03
8GO:0005789: endoplasmic reticulum membrane3.25E-03
9GO:0016021: integral component of membrane3.29E-03
10GO:0005770: late endosome5.46E-03
11GO:0005829: cytosol6.00E-03
12GO:0019898: extrinsic component of membrane6.03E-03
13GO:0031965: nuclear membrane6.03E-03
14GO:0005794: Golgi apparatus6.38E-03
15GO:0031201: SNARE complex1.31E-02
16GO:0000502: proteasome complex1.71E-02
17GO:0012505: endomembrane system2.15E-02
18GO:0005783: endoplasmic reticulum3.19E-02
19GO:0009705: plant-type vacuole membrane3.25E-02
20GO:0046658: anchored component of plasma membrane3.97E-02
21GO:0048046: apoplast4.31E-02
22GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.73E-02
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Gene type



Gene DE type