Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G56190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0010498: proteasomal protein catabolic process6.55E-05
3GO:0043617: cellular response to sucrose starvation6.55E-05
4GO:0010255: glucose mediated signaling pathway9.94E-05
5GO:0001676: long-chain fatty acid metabolic process9.94E-05
6GO:0046355: mannan catabolic process1.37E-04
7GO:0010363: regulation of plant-type hypersensitive response1.37E-04
8GO:0006564: L-serine biosynthetic process1.78E-04
9GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.22E-04
10GO:0051603: proteolysis involved in cellular protein catabolic process2.77E-04
11GO:0006526: arginine biosynthetic process4.16E-04
12GO:0006511: ubiquitin-dependent protein catabolic process4.85E-04
13GO:0009725: response to hormone7.52E-04
14GO:0019762: glucosinolate catabolic process9.38E-04
15GO:0010431: seed maturation1.13E-03
16GO:0030433: ubiquitin-dependent ERAD pathway1.20E-03
17GO:0009561: megagametogenesis1.34E-03
18GO:0010154: fruit development1.56E-03
19GO:0009646: response to absence of light1.64E-03
20GO:0010193: response to ozone1.80E-03
21GO:0016579: protein deubiquitination2.21E-03
22GO:0010311: lateral root formation2.84E-03
23GO:0010043: response to zinc ion3.03E-03
24GO:0009555: pollen development3.06E-03
25GO:0009651: response to salt stress3.60E-03
26GO:0006631: fatty acid metabolic process3.63E-03
27GO:0009744: response to sucrose3.83E-03
28GO:0009553: embryo sac development5.86E-03
29GO:0005975: carbohydrate metabolic process9.35E-03
30GO:0007166: cell surface receptor signaling pathway9.60E-03
31GO:0009414: response to water deprivation4.46E-02
32GO:0071555: cell wall organization4.54E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0004298: threonine-type endopeptidase activity2.43E-05
3GO:0004617: phosphoglycerate dehydrogenase activity3.65E-05
4GO:0004848: ureidoglycolate hydrolase activity6.55E-05
5GO:0004557: alpha-galactosidase activity6.55E-05
6GO:0052692: raffinose alpha-galactosidase activity6.55E-05
7GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity6.55E-05
8GO:0016985: mannan endo-1,4-beta-mannosidase activity1.37E-04
9GO:0036402: proteasome-activating ATPase activity2.22E-04
10GO:0102391: decanoate--CoA ligase activity2.68E-04
11GO:0004467: long-chain fatty acid-CoA ligase activity3.15E-04
12GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity5.78E-04
13GO:0017025: TBP-class protein binding8.75E-04
14GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.13E-03
15GO:0008233: peptidase activity1.18E-03
16GO:0004843: thiol-dependent ubiquitin-specific protease activity1.80E-03
17GO:0008237: metallopeptidase activity2.13E-03
18GO:0016597: amino acid binding2.21E-03
19GO:0102483: scopolin beta-glucosidase activity2.57E-03
20GO:0016798: hydrolase activity, acting on glycosyl bonds2.57E-03
21GO:0016887: ATPase activity2.68E-03
22GO:0008422: beta-glucosidase activity3.42E-03
23GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.03E-03
24GO:0051287: NAD binding4.36E-03
25GO:0005516: calmodulin binding4.58E-03
26GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.32E-03
27GO:0005524: ATP binding2.54E-02
28GO:0000166: nucleotide binding2.74E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex7.19E-06
2GO:0005839: proteasome core complex2.43E-05
3GO:0046861: glyoxysomal membrane6.55E-05
4GO:0031597: cytosolic proteasome complex2.68E-04
5GO:0031595: nuclear proteasome complex3.15E-04
6GO:0009514: glyoxysome4.16E-04
7GO:0008540: proteasome regulatory particle, base subcomplex5.23E-04
8GO:0048046: apoplast3.99E-03
9GO:0031966: mitochondrial membrane4.47E-03
10GO:0005773: vacuole6.44E-03
11GO:0005759: mitochondrial matrix8.19E-03
12GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.27E-02
13GO:0005774: vacuolar membrane2.14E-02
14GO:0005777: peroxisome3.03E-02
15GO:0005829: cytosol4.41E-02
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Gene type



Gene DE type