Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G56170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
2GO:0042350: GDP-L-fucose biosynthetic process2.30E-05
3GO:0043609: regulation of carbon utilization2.30E-05
4GO:0042853: L-alanine catabolic process5.89E-05
5GO:0009156: ribonucleoside monophosphate biosynthetic process5.89E-05
6GO:0006597: spermine biosynthetic process5.89E-05
7GO:0031538: negative regulation of anthocyanin metabolic process5.89E-05
8GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.04E-04
9GO:0010253: UDP-rhamnose biosynthetic process1.04E-04
10GO:0071329: cellular response to sucrose stimulus1.55E-04
11GO:0009226: nucleotide-sugar biosynthetic process1.55E-04
12GO:0043967: histone H4 acetylation1.55E-04
13GO:0009165: nucleotide biosynthetic process2.12E-04
14GO:0042176: regulation of protein catabolic process3.37E-04
15GO:0010315: auxin efflux3.37E-04
16GO:0006596: polyamine biosynthetic process3.37E-04
17GO:0043966: histone H3 acetylation4.04E-04
18GO:0006368: transcription elongation from RNA polymerase II promoter4.74E-04
19GO:0010928: regulation of auxin mediated signaling pathway5.46E-04
20GO:0035265: organ growth5.46E-04
21GO:0015996: chlorophyll catabolic process6.21E-04
22GO:2000024: regulation of leaf development6.98E-04
23GO:0051555: flavonol biosynthetic process8.59E-04
24GO:0006913: nucleocytoplasmic transport9.42E-04
25GO:0072593: reactive oxygen species metabolic process9.42E-04
26GO:0046856: phosphatidylinositol dephosphorylation9.42E-04
27GO:0006511: ubiquitin-dependent protein catabolic process1.06E-03
28GO:0034605: cellular response to heat1.20E-03
29GO:0009225: nucleotide-sugar metabolic process1.30E-03
30GO:0009116: nucleoside metabolic process1.49E-03
31GO:0042127: regulation of cell proliferation2.02E-03
32GO:0008284: positive regulation of cell proliferation2.13E-03
33GO:0010118: stomatal movement2.24E-03
34GO:0030163: protein catabolic process2.96E-03
35GO:0001666: response to hypoxia3.48E-03
36GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.62E-03
37GO:0009737: response to abscisic acid4.51E-03
38GO:0009738: abscisic acid-activated signaling pathway5.49E-03
39GO:0008283: cell proliferation5.84E-03
40GO:0051603: proteolysis involved in cellular protein catabolic process7.35E-03
41GO:0009651: response to salt stress8.03E-03
42GO:0009058: biosynthetic process1.11E-02
43GO:0009414: response to water deprivation1.12E-02
44GO:0071555: cell wall organization1.15E-02
45GO:0010150: leaf senescence1.35E-02
46GO:0006470: protein dephosphorylation1.48E-02
47GO:0009617: response to bacterium1.53E-02
48GO:0009658: chloroplast organization1.84E-02
49GO:0007275: multicellular organism development2.27E-02
50GO:0009753: response to jasmonic acid2.97E-02
51GO:0006357: regulation of transcription from RNA polymerase II promoter3.45E-02
52GO:0006508: proteolysis3.54E-02
53GO:0009734: auxin-activated signaling pathway3.61E-02
54GO:0045893: positive regulation of transcription, DNA-templated4.69E-02
RankGO TermAdjusted P value
1GO:0102293: pheophytinase b activity2.30E-05
2GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity2.30E-05
3GO:0016768: spermine synthase activity2.30E-05
4GO:0050577: GDP-L-fucose synthase activity2.30E-05
5GO:0004298: threonine-type endopeptidase activity5.09E-05
6GO:0050377: UDP-glucose 4,6-dehydratase activity5.89E-05
7GO:0047746: chlorophyllase activity5.89E-05
8GO:0008460: dTDP-glucose 4,6-dehydratase activity5.89E-05
9GO:0004766: spermidine synthase activity5.89E-05
10GO:0010280: UDP-L-rhamnose synthase activity5.89E-05
11GO:0016853: isomerase activity9.77E-05
12GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.55E-04
13GO:0004749: ribose phosphate diphosphokinase activity1.55E-04
14GO:0000993: RNA polymerase II core binding2.12E-04
15GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity3.37E-04
16GO:0030234: enzyme regulator activity8.59E-04
17GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.03E-03
18GO:0004175: endopeptidase activity1.20E-03
19GO:0008408: 3'-5' exonuclease activity1.70E-03
20GO:0004402: histone acetyltransferase activity2.24E-03
21GO:0004527: exonuclease activity2.36E-03
22GO:0050662: coenzyme binding2.48E-03
23GO:0005096: GTPase activator activity4.32E-03
24GO:0004222: metalloendopeptidase activity4.46E-03
25GO:0016887: ATPase activity4.95E-03
26GO:0004650: polygalacturonase activity8.61E-03
27GO:0016829: lyase activity1.14E-02
28GO:0030170: pyridoxal phosphate binding1.16E-02
29GO:0003824: catalytic activity1.26E-02
30GO:0016491: oxidoreductase activity1.52E-02
31GO:0000287: magnesium ion binding1.81E-02
32GO:0008233: peptidase activity2.11E-02
33GO:0004722: protein serine/threonine phosphatase activity2.60E-02
34GO:0003676: nucleic acid binding4.73E-02
35GO:0016740: transferase activity4.90E-02
RankGO TermAdjusted P value
1GO:0033106: cis-Golgi network membrane0.00E+00
2GO:0000502: proteasome complex3.71E-07
3GO:0008023: transcription elongation factor complex2.30E-05
4GO:0005839: proteasome core complex5.09E-05
5GO:0033588: Elongator holoenzyme complex1.55E-04
6GO:0000813: ESCRT I complex2.73E-04
7GO:0000123: histone acetyltransferase complex4.74E-04
8GO:0019773: proteasome core complex, alpha-subunit complex6.21E-04
9GO:0008541: proteasome regulatory particle, lid subcomplex9.42E-04
10GO:0031965: nuclear membrane2.60E-03
11GO:0005819: spindle5.21E-03
12GO:0005635: nuclear envelope7.52E-03
13GO:0005737: cytoplasm8.99E-03
14GO:0009524: phragmoplast1.11E-02
15GO:0031969: chloroplast membrane2.14E-02
16GO:0005743: mitochondrial inner membrane2.68E-02
17GO:0005774: vacuolar membrane3.99E-02
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Gene type



Gene DE type