GO Enrichment Analysis of Co-expressed Genes with
AT3G55760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 3 | GO:0009661: chromoplast organization | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 6 | GO:0009657: plastid organization | 1.56E-06 |
| 7 | GO:0009854: oxidative photosynthetic carbon pathway | 5.10E-05 |
| 8 | GO:0019252: starch biosynthetic process | 7.07E-05 |
| 9 | GO:0015979: photosynthesis | 1.29E-04 |
| 10 | GO:0071277: cellular response to calcium ion | 1.33E-04 |
| 11 | GO:0000476: maturation of 4.5S rRNA | 1.33E-04 |
| 12 | GO:0000967: rRNA 5'-end processing | 1.33E-04 |
| 13 | GO:0046467: membrane lipid biosynthetic process | 1.33E-04 |
| 14 | GO:0006637: acyl-CoA metabolic process | 1.33E-04 |
| 15 | GO:0015671: oxygen transport | 1.33E-04 |
| 16 | GO:0065002: intracellular protein transmembrane transport | 1.33E-04 |
| 17 | GO:0043953: protein transport by the Tat complex | 1.33E-04 |
| 18 | GO:0071457: cellular response to ozone | 3.07E-04 |
| 19 | GO:0010541: acropetal auxin transport | 3.07E-04 |
| 20 | GO:0000256: allantoin catabolic process | 3.07E-04 |
| 21 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.07E-04 |
| 22 | GO:0034470: ncRNA processing | 3.07E-04 |
| 23 | GO:0010020: chloroplast fission | 3.42E-04 |
| 24 | GO:0010160: formation of animal organ boundary | 5.06E-04 |
| 25 | GO:0010136: ureide catabolic process | 5.06E-04 |
| 26 | GO:0005977: glycogen metabolic process | 5.06E-04 |
| 27 | GO:0019748: secondary metabolic process | 6.25E-04 |
| 28 | GO:0010731: protein glutathionylation | 7.24E-04 |
| 29 | GO:0071484: cellular response to light intensity | 7.24E-04 |
| 30 | GO:0009152: purine ribonucleotide biosynthetic process | 7.24E-04 |
| 31 | GO:0046653: tetrahydrofolate metabolic process | 7.24E-04 |
| 32 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 7.24E-04 |
| 33 | GO:0006145: purine nucleobase catabolic process | 7.24E-04 |
| 34 | GO:2000122: negative regulation of stomatal complex development | 9.59E-04 |
| 35 | GO:0006021: inositol biosynthetic process | 9.59E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 9.59E-04 |
| 37 | GO:0010037: response to carbon dioxide | 9.59E-04 |
| 38 | GO:0015976: carbon utilization | 9.59E-04 |
| 39 | GO:0071486: cellular response to high light intensity | 9.59E-04 |
| 40 | GO:0015689: molybdate ion transport | 9.59E-04 |
| 41 | GO:0009765: photosynthesis, light harvesting | 9.59E-04 |
| 42 | GO:0006564: L-serine biosynthetic process | 1.21E-03 |
| 43 | GO:0071493: cellular response to UV-B | 1.21E-03 |
| 44 | GO:0016120: carotene biosynthetic process | 1.21E-03 |
| 45 | GO:0009228: thiamine biosynthetic process | 1.49E-03 |
| 46 | GO:0046855: inositol phosphate dephosphorylation | 1.49E-03 |
| 47 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.49E-03 |
| 48 | GO:0060918: auxin transport | 1.49E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 1.49E-03 |
| 50 | GO:0050665: hydrogen peroxide biosynthetic process | 1.49E-03 |
| 51 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.49E-03 |
| 52 | GO:0071333: cellular response to glucose stimulus | 1.78E-03 |
| 53 | GO:0015995: chlorophyll biosynthetic process | 1.89E-03 |
| 54 | GO:0009645: response to low light intensity stimulus | 2.09E-03 |
| 55 | GO:0009395: phospholipid catabolic process | 2.09E-03 |
| 56 | GO:1900056: negative regulation of leaf senescence | 2.09E-03 |
| 57 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.09E-03 |
| 58 | GO:0010218: response to far red light | 2.30E-03 |
| 59 | GO:0009704: de-etiolation | 2.42E-03 |
| 60 | GO:0050821: protein stabilization | 2.42E-03 |
| 61 | GO:0052543: callose deposition in cell wall | 2.42E-03 |
| 62 | GO:0016559: peroxisome fission | 2.42E-03 |
| 63 | GO:0009637: response to blue light | 2.64E-03 |
| 64 | GO:0009853: photorespiration | 2.64E-03 |
| 65 | GO:0019430: removal of superoxide radicals | 2.77E-03 |
| 66 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.77E-03 |
| 67 | GO:0071482: cellular response to light stimulus | 2.77E-03 |
| 68 | GO:0090333: regulation of stomatal closure | 3.13E-03 |
| 69 | GO:0006098: pentose-phosphate shunt | 3.13E-03 |
| 70 | GO:0019432: triglyceride biosynthetic process | 3.13E-03 |
| 71 | GO:0010114: response to red light | 3.40E-03 |
| 72 | GO:0005982: starch metabolic process | 3.50E-03 |
| 73 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.50E-03 |
| 74 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.08E-03 |
| 75 | GO:0009773: photosynthetic electron transport in photosystem I | 4.30E-03 |
| 76 | GO:0005975: carbohydrate metabolic process | 4.44E-03 |
| 77 | GO:0008361: regulation of cell size | 4.72E-03 |
| 78 | GO:0006790: sulfur compound metabolic process | 4.72E-03 |
| 79 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.72E-03 |
| 80 | GO:0030048: actin filament-based movement | 5.15E-03 |
| 81 | GO:0006094: gluconeogenesis | 5.15E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 5.15E-03 |
| 83 | GO:0010540: basipetal auxin transport | 5.60E-03 |
| 84 | GO:0010143: cutin biosynthetic process | 5.60E-03 |
| 85 | GO:0019853: L-ascorbic acid biosynthetic process | 6.06E-03 |
| 86 | GO:0046854: phosphatidylinositol phosphorylation | 6.06E-03 |
| 87 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.53E-03 |
| 88 | GO:0009833: plant-type primary cell wall biogenesis | 6.53E-03 |
| 89 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.51E-03 |
| 90 | GO:0016114: terpenoid biosynthetic process | 8.02E-03 |
| 91 | GO:0009269: response to desiccation | 8.02E-03 |
| 92 | GO:0035428: hexose transmembrane transport | 8.55E-03 |
| 93 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.55E-03 |
| 94 | GO:0071215: cellular response to abscisic acid stimulus | 9.08E-03 |
| 95 | GO:0048443: stamen development | 9.63E-03 |
| 96 | GO:0010118: stomatal movement | 1.08E-02 |
| 97 | GO:0042631: cellular response to water deprivation | 1.08E-02 |
| 98 | GO:0009958: positive gravitropism | 1.13E-02 |
| 99 | GO:0006520: cellular amino acid metabolic process | 1.13E-02 |
| 100 | GO:0046323: glucose import | 1.13E-02 |
| 101 | GO:0071472: cellular response to salt stress | 1.13E-02 |
| 102 | GO:0007059: chromosome segregation | 1.19E-02 |
| 103 | GO:0009791: post-embryonic development | 1.25E-02 |
| 104 | GO:0032502: developmental process | 1.38E-02 |
| 105 | GO:0007264: small GTPase mediated signal transduction | 1.38E-02 |
| 106 | GO:1901657: glycosyl compound metabolic process | 1.44E-02 |
| 107 | GO:0009639: response to red or far red light | 1.51E-02 |
| 108 | GO:0009567: double fertilization forming a zygote and endosperm | 1.51E-02 |
| 109 | GO:0010027: thylakoid membrane organization | 1.71E-02 |
| 110 | GO:0009658: chloroplast organization | 1.74E-02 |
| 111 | GO:0055085: transmembrane transport | 1.80E-02 |
| 112 | GO:0016311: dephosphorylation | 1.99E-02 |
| 113 | GO:0030244: cellulose biosynthetic process | 2.06E-02 |
| 114 | GO:0018298: protein-chromophore linkage | 2.06E-02 |
| 115 | GO:0080167: response to karrikin | 2.16E-02 |
| 116 | GO:0006811: ion transport | 2.21E-02 |
| 117 | GO:0048527: lateral root development | 2.29E-02 |
| 118 | GO:0010119: regulation of stomatal movement | 2.29E-02 |
| 119 | GO:0009910: negative regulation of flower development | 2.29E-02 |
| 120 | GO:0034599: cellular response to oxidative stress | 2.52E-02 |
| 121 | GO:0006631: fatty acid metabolic process | 2.76E-02 |
| 122 | GO:0009640: photomorphogenesis | 2.92E-02 |
| 123 | GO:0009926: auxin polar transport | 2.92E-02 |
| 124 | GO:0000209: protein polyubiquitination | 3.01E-02 |
| 125 | GO:0009644: response to high light intensity | 3.09E-02 |
| 126 | GO:0009636: response to toxic substance | 3.18E-02 |
| 127 | GO:0006364: rRNA processing | 3.62E-02 |
| 128 | GO:0006417: regulation of translation | 3.89E-02 |
| 129 | GO:0006096: glycolytic process | 4.07E-02 |
| 130 | GO:0006396: RNA processing | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0009011: starch synthase activity | 5.24E-08 |
| 8 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.33E-04 |
| 9 | GO:0005344: oxygen transporter activity | 1.33E-04 |
| 10 | GO:0019156: isoamylase activity | 3.07E-04 |
| 11 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.07E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.07E-04 |
| 13 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.07E-04 |
| 14 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.07E-04 |
| 15 | GO:0033201: alpha-1,4-glucan synthase activity | 3.07E-04 |
| 16 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.07E-04 |
| 17 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.07E-04 |
| 18 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.07E-04 |
| 19 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 5.06E-04 |
| 20 | GO:0008864: formyltetrahydrofolate deformylase activity | 5.06E-04 |
| 21 | GO:0004373: glycogen (starch) synthase activity | 5.06E-04 |
| 22 | GO:0050734: hydroxycinnamoyltransferase activity | 5.06E-04 |
| 23 | GO:0004848: ureidoglycolate hydrolase activity | 5.06E-04 |
| 24 | GO:0016851: magnesium chelatase activity | 7.24E-04 |
| 25 | GO:0003883: CTP synthase activity | 7.24E-04 |
| 26 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 7.24E-04 |
| 27 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 7.24E-04 |
| 28 | GO:0001872: (1->3)-beta-D-glucan binding | 7.24E-04 |
| 29 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 7.24E-04 |
| 30 | GO:0008891: glycolate oxidase activity | 9.59E-04 |
| 31 | GO:0015098: molybdate ion transmembrane transporter activity | 9.59E-04 |
| 32 | GO:0042578: phosphoric ester hydrolase activity | 1.49E-03 |
| 33 | GO:0004556: alpha-amylase activity | 1.49E-03 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 1.49E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.49E-03 |
| 36 | GO:0004784: superoxide dismutase activity | 1.49E-03 |
| 37 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.78E-03 |
| 38 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.78E-03 |
| 39 | GO:0042802: identical protein binding | 2.32E-03 |
| 40 | GO:0005337: nucleoside transmembrane transporter activity | 2.42E-03 |
| 41 | GO:0003993: acid phosphatase activity | 2.76E-03 |
| 42 | GO:0008135: translation factor activity, RNA binding | 2.77E-03 |
| 43 | GO:0004185: serine-type carboxypeptidase activity | 3.40E-03 |
| 44 | GO:0047617: acyl-CoA hydrolase activity | 3.50E-03 |
| 45 | GO:0051287: NAD binding | 4.10E-03 |
| 46 | GO:0047372: acylglycerol lipase activity | 4.30E-03 |
| 47 | GO:0004089: carbonate dehydratase activity | 5.15E-03 |
| 48 | GO:0004565: beta-galactosidase activity | 5.15E-03 |
| 49 | GO:0010329: auxin efflux transmembrane transporter activity | 5.15E-03 |
| 50 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 5.56E-03 |
| 51 | GO:0008266: poly(U) RNA binding | 5.60E-03 |
| 52 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.60E-03 |
| 53 | GO:0003774: motor activity | 5.60E-03 |
| 54 | GO:0031409: pigment binding | 6.53E-03 |
| 55 | GO:0005216: ion channel activity | 7.51E-03 |
| 56 | GO:0016760: cellulose synthase (UDP-forming) activity | 9.08E-03 |
| 57 | GO:0022891: substrate-specific transmembrane transporter activity | 9.08E-03 |
| 58 | GO:0003727: single-stranded RNA binding | 9.63E-03 |
| 59 | GO:0005355: glucose transmembrane transporter activity | 1.19E-02 |
| 60 | GO:0010181: FMN binding | 1.19E-02 |
| 61 | GO:0016491: oxidoreductase activity | 1.29E-02 |
| 62 | GO:0016759: cellulose synthase activity | 1.51E-02 |
| 63 | GO:0008237: metallopeptidase activity | 1.57E-02 |
| 64 | GO:0016597: amino acid binding | 1.64E-02 |
| 65 | GO:0016788: hydrolase activity, acting on ester bonds | 1.77E-02 |
| 66 | GO:0016168: chlorophyll binding | 1.78E-02 |
| 67 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.89E-02 |
| 68 | GO:0030247: polysaccharide binding | 1.92E-02 |
| 69 | GO:0102483: scopolin beta-glucosidase activity | 1.92E-02 |
| 70 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.29E-02 |
| 71 | GO:0003746: translation elongation factor activity | 2.44E-02 |
| 72 | GO:0005525: GTP binding | 2.49E-02 |
| 73 | GO:0008422: beta-glucosidase activity | 2.60E-02 |
| 74 | GO:0004364: glutathione transferase activity | 2.84E-02 |
| 75 | GO:0043621: protein self-association | 3.09E-02 |
| 76 | GO:0003924: GTPase activity | 3.19E-02 |
| 77 | GO:0031625: ubiquitin protein ligase binding | 3.89E-02 |
| 78 | GO:0008289: lipid binding | 4.42E-02 |
| 79 | GO:0022857: transmembrane transporter activity | 4.45E-02 |
| 80 | GO:0016887: ATPase activity | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 9.11E-14 |
| 3 | GO:0009570: chloroplast stroma | 1.61E-05 |
| 4 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.33E-04 |
| 5 | GO:0031361: integral component of thylakoid membrane | 1.33E-04 |
| 6 | GO:0009579: thylakoid | 1.68E-04 |
| 7 | GO:0009534: chloroplast thylakoid | 1.72E-04 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.84E-04 |
| 9 | GO:0033281: TAT protein transport complex | 5.06E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 5.06E-04 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 5.22E-04 |
| 12 | GO:0031969: chloroplast membrane | 6.85E-04 |
| 13 | GO:0030658: transport vesicle membrane | 7.24E-04 |
| 14 | GO:0009526: plastid envelope | 9.59E-04 |
| 15 | GO:0009517: PSII associated light-harvesting complex II | 9.59E-04 |
| 16 | GO:0009522: photosystem I | 9.89E-04 |
| 17 | GO:0019898: extrinsic component of membrane | 1.06E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 1.15E-03 |
| 19 | GO:0009941: chloroplast envelope | 1.18E-03 |
| 20 | GO:0005773: vacuole | 1.57E-03 |
| 21 | GO:0009501: amyloplast | 2.42E-03 |
| 22 | GO:0031977: thylakoid lumen | 3.13E-03 |
| 23 | GO:0005777: peroxisome | 3.61E-03 |
| 24 | GO:0016459: myosin complex | 3.89E-03 |
| 25 | GO:0005765: lysosomal membrane | 4.30E-03 |
| 26 | GO:0030095: chloroplast photosystem II | 5.60E-03 |
| 27 | GO:0030076: light-harvesting complex | 6.06E-03 |
| 28 | GO:0010287: plastoglobule | 7.69E-03 |
| 29 | GO:0009523: photosystem II | 1.25E-02 |
| 30 | GO:0048046: apoplast | 2.01E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 2.06E-02 |
| 32 | GO:0005886: plasma membrane | 2.21E-02 |
| 33 | GO:0005819: spindle | 2.60E-02 |
| 34 | GO:0031902: late endosome membrane | 2.76E-02 |