Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002764: immune response-regulating signaling pathway0.00E+00
2GO:0019673: GDP-mannose metabolic process6.10E-05
3GO:0051180: vitamin transport6.10E-05
4GO:0030974: thiamine pyrophosphate transport6.10E-05
5GO:0034975: protein folding in endoplasmic reticulum6.10E-05
6GO:0048482: plant ovule morphogenesis6.10E-05
7GO:0010941: regulation of cell death6.10E-05
8GO:0015893: drug transport1.48E-04
9GO:0060919: auxin influx1.48E-04
10GO:0080185: effector dependent induction by symbiont of host immune response1.48E-04
11GO:1902066: regulation of cell wall pectin metabolic process1.48E-04
12GO:0007584: response to nutrient1.48E-04
13GO:2000022: regulation of jasmonic acid mediated signaling pathway2.21E-04
14GO:1901672: positive regulation of systemic acquired resistance2.51E-04
15GO:0048586: regulation of long-day photoperiodism, flowering2.51E-04
16GO:0032922: circadian regulation of gene expression2.51E-04
17GO:0016045: detection of bacterium2.51E-04
18GO:0010359: regulation of anion channel activity2.51E-04
19GO:0042351: 'de novo' GDP-L-fucose biosynthetic process2.51E-04
20GO:0051176: positive regulation of sulfur metabolic process2.51E-04
21GO:0046621: negative regulation of organ growth2.51E-04
22GO:0071494: cellular response to UV-C2.51E-04
23GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process2.51E-04
24GO:0042823: pyridoxal phosphate biosynthetic process3.65E-04
25GO:0043967: histone H4 acetylation3.65E-04
26GO:0000187: activation of MAPK activity3.65E-04
27GO:0030100: regulation of endocytosis3.65E-04
28GO:0010104: regulation of ethylene-activated signaling pathway3.65E-04
29GO:0010107: potassium ion import4.88E-04
30GO:2000038: regulation of stomatal complex development4.88E-04
31GO:0006464: cellular protein modification process4.99E-04
32GO:0006465: signal peptide processing6.19E-04
33GO:0035556: intracellular signal transduction6.44E-04
34GO:0010315: auxin efflux7.57E-04
35GO:0048317: seed morphogenesis7.57E-04
36GO:0006970: response to osmotic stress8.76E-04
37GO:2000037: regulation of stomatal complex patterning9.01E-04
38GO:0006468: protein phosphorylation1.03E-03
39GO:0070370: cellular heat acclimation1.05E-03
40GO:0046777: protein autophosphorylation1.13E-03
41GO:0006897: endocytosis1.13E-03
42GO:0030162: regulation of proteolysis1.21E-03
43GO:0006491: N-glycan processing1.21E-03
44GO:1900150: regulation of defense response to fungus1.21E-03
45GO:0032875: regulation of DNA endoreduplication1.21E-03
46GO:0045010: actin nucleation1.21E-03
47GO:0048193: Golgi vesicle transport1.38E-03
48GO:0010204: defense response signaling pathway, resistance gene-independent1.38E-03
49GO:0009932: cell tip growth1.38E-03
50GO:0009051: pentose-phosphate shunt, oxidative branch1.55E-03
51GO:0009626: plant-type hypersensitive response2.04E-03
52GO:0016925: protein sumoylation2.32E-03
53GO:0018105: peptidyl-serine phosphorylation2.36E-03
54GO:0015031: protein transport2.46E-03
55GO:0006006: glucose metabolic process2.52E-03
56GO:0010229: inflorescence development2.52E-03
57GO:0007034: vacuolar transport2.74E-03
58GO:0010540: basipetal auxin transport2.74E-03
59GO:0034605: cellular response to heat2.74E-03
60GO:0046854: phosphatidylinositol phosphorylation2.96E-03
61GO:0009863: salicylic acid mediated signaling pathway3.42E-03
62GO:0006338: chromatin remodeling3.42E-03
63GO:0006487: protein N-linked glycosylation3.42E-03
64GO:0009814: defense response, incompatible interaction4.15E-03
65GO:0016226: iron-sulfur cluster assembly4.15E-03
66GO:0010227: floral organ abscission4.40E-03
67GO:0009617: response to bacterium4.68E-03
68GO:0006457: protein folding4.83E-03
69GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.92E-03
70GO:0000413: protein peptidyl-prolyl isomerization5.19E-03
71GO:0010118: stomatal movement5.19E-03
72GO:0006351: transcription, DNA-templated5.25E-03
73GO:0010193: response to ozone6.32E-03
74GO:0006891: intra-Golgi vesicle-mediated transport6.32E-03
75GO:0048510: regulation of timing of transition from vegetative to reproductive phase6.32E-03
76GO:0031047: gene silencing by RNA6.61E-03
77GO:0009630: gravitropism6.61E-03
78GO:0006355: regulation of transcription, DNA-templated6.80E-03
79GO:0010200: response to chitin7.78E-03
80GO:0000910: cytokinesis7.84E-03
81GO:0009615: response to virus8.16E-03
82GO:0009816: defense response to bacterium, incompatible interaction8.48E-03
83GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.48E-03
84GO:0006974: cellular response to DNA damage stimulus8.81E-03
85GO:0009627: systemic acquired resistance8.81E-03
86GO:0009817: defense response to fungus, incompatible interaction9.82E-03
87GO:0048767: root hair elongation1.02E-02
88GO:0009813: flavonoid biosynthetic process1.02E-02
89GO:0009631: cold acclimation1.09E-02
90GO:0009408: response to heat1.11E-02
91GO:0048364: root development1.16E-02
92GO:0006839: mitochondrial transport1.27E-02
93GO:0009926: auxin polar transport1.39E-02
94GO:0009873: ethylene-activated signaling pathway1.44E-02
95GO:0008643: carbohydrate transport1.47E-02
96GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.59E-02
97GO:0000165: MAPK cascade1.59E-02
98GO:0006486: protein glycosylation1.71E-02
99GO:0010224: response to UV-B1.76E-02
100GO:0009620: response to fungus2.06E-02
101GO:0016569: covalent chromatin modification2.11E-02
102GO:0016310: phosphorylation2.65E-02
103GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.52E-02
104GO:0006470: protein dephosphorylation3.57E-02
105GO:0009414: response to water deprivation3.90E-02
106GO:0009651: response to salt stress3.90E-02
107GO:0009826: unidimensional cell growth4.31E-02
RankGO TermAdjusted P value
1GO:0005522: profilin binding0.00E+00
2GO:1901149: salicylic acid binding6.10E-05
3GO:0090422: thiamine pyrophosphate transporter activity6.10E-05
4GO:1990188: euchromatin binding6.10E-05
5GO:0008446: GDP-mannose 4,6-dehydratase activity6.10E-05
6GO:0016301: kinase activity1.71E-04
7GO:0019948: SUMO activating enzyme activity2.51E-04
8GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity3.65E-04
9GO:0019199: transmembrane receptor protein kinase activity4.88E-04
10GO:0004345: glucose-6-phosphate dehydrogenase activity4.88E-04
11GO:0010328: auxin influx transmembrane transporter activity4.88E-04
12GO:0005515: protein binding4.99E-04
13GO:0045431: flavonol synthase activity6.19E-04
14GO:0009931: calcium-dependent protein serine/threonine kinase activity6.59E-04
15GO:0004683: calmodulin-dependent protein kinase activity6.93E-04
16GO:0004559: alpha-mannosidase activity9.01E-04
17GO:0005524: ATP binding1.12E-03
18GO:0004708: MAP kinase kinase activity1.21E-03
19GO:0008312: 7S RNA binding1.21E-03
20GO:0004430: 1-phosphatidylinositol 4-kinase activity1.38E-03
21GO:0005267: potassium channel activity1.38E-03
22GO:0071949: FAD binding1.55E-03
23GO:0008047: enzyme activator activity1.92E-03
24GO:0005543: phospholipid binding2.12E-03
25GO:0008559: xenobiotic-transporting ATPase activity2.12E-03
26GO:0010329: auxin efflux transmembrane transporter activity2.52E-03
27GO:0031072: heat shock protein binding2.52E-03
28GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.74E-03
29GO:0004175: endopeptidase activity2.74E-03
30GO:0043130: ubiquitin binding3.42E-03
31GO:0003756: protein disulfide isomerase activity4.65E-03
32GO:0008514: organic anion transmembrane transporter activity4.65E-03
33GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.91E-03
34GO:0051015: actin filament binding6.91E-03
35GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.52E-03
36GO:0005509: calcium ion binding7.68E-03
37GO:0008375: acetylglucosaminyltransferase activity8.81E-03
38GO:0008236: serine-type peptidase activity9.47E-03
39GO:0004712: protein serine/threonine/tyrosine kinase activity1.23E-02
40GO:0050661: NADP binding1.27E-02
41GO:0004672: protein kinase activity1.39E-02
42GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.55E-02
43GO:0031625: ubiquitin protein ligase binding1.84E-02
44GO:0008234: cysteine-type peptidase activity1.84E-02
45GO:0004674: protein serine/threonine kinase activity1.90E-02
46GO:0003779: actin binding2.15E-02
47GO:0051082: unfolded protein binding2.20E-02
48GO:0015035: protein disulfide oxidoreductase activity2.25E-02
49GO:0004386: helicase activity2.34E-02
50GO:0008565: protein transporter activity2.94E-02
51GO:0005516: calmodulin binding2.98E-02
52GO:0005525: GTP binding3.25E-02
53GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.85E-02
54GO:0046982: protein heterodimerization activity4.37E-02
RankGO TermAdjusted P value
1GO:0005911: cell-cell junction6.10E-05
2GO:0005768: endosome2.67E-04
3GO:0000813: ESCRT I complex6.19E-04
4GO:0000815: ESCRT III complex9.01E-04
5GO:0000123: histone acetyltransferase complex1.05E-03
6GO:0005794: Golgi apparatus2.15E-03
7GO:0005795: Golgi stack2.96E-03
8GO:0005905: clathrin-coated pit3.89E-03
9GO:0030136: clathrin-coated vesicle4.92E-03
10GO:0005770: late endosome5.46E-03
11GO:0005829: cytosol6.00E-03
12GO:0009504: cell plate6.03E-03
13GO:0019005: SCF ubiquitin ligase complex9.82E-03
14GO:0005634: nucleus1.23E-02
15GO:0005886: plasma membrane1.32E-02
16GO:0090406: pollen tube1.39E-02
17GO:0010008: endosome membrane1.97E-02
18GO:0012505: endomembrane system2.15E-02
19GO:0005802: trans-Golgi network3.17E-02
20GO:0046658: anchored component of plasma membrane3.97E-02
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Gene type



Gene DE type