co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G55630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
2	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
3	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
4	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
5	GO:0017038: protein import	0.00E+00
6	GO:0070979: protein K11-linked ubiquitination	0.00E+00
7	GO:0090279: regulation of calcium ion import	0.00E+00
8	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
9	GO:0043488: regulation of mRNA stability	0.00E+00
10	GO:0042820: vitamin B6 catabolic process	0.00E+00
11	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
12	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
13	GO:0030155: regulation of cell adhesion	0.00E+00
14	GO:0090706: specification of plant organ position	0.00E+00
15	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
16	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
17	GO:1905177: tracheary element differentiation	0.00E+00
18	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
19	GO:0008298: intracellular mRNA localization	0.00E+00
20	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
21	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
22	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
23	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
24	GO:0071474: cellular hyperosmotic response	0.00E+00
25	GO:0042821: pyridoxal biosynthetic process	0.00E+00
26	GO:0042371: vitamin K biosynthetic process	0.00E+00
27	GO:0007638: mechanosensory behavior	0.00E+00
28	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
29	GO:0006399: tRNA metabolic process	0.00E+00
30	GO:0006573: valine metabolic process	0.00E+00
31	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
32	GO:0007172: signal complex assembly	0.00E+00
33	GO:0009658: chloroplast organization	8.62E-07
34	GO:0010027: thylakoid membrane organization	1.07E-05
35	GO:0045038: protein import into chloroplast thylakoid membrane	1.46E-05
36	GO:0015995: chlorophyll biosynthetic process	1.73E-05
37	GO:0015979: photosynthesis	2.83E-05
38	GO:1900871: chloroplast mRNA modification	2.98E-05
39	GO:0005977: glycogen metabolic process	9.44E-05
40	GO:0071482: cellular response to light stimulus	1.32E-04
41	GO:0016556: mRNA modification	1.93E-04
42	GO:2001141: regulation of RNA biosynthetic process	1.93E-04
43	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.93E-04
44	GO:1900865: chloroplast RNA modification	2.23E-04
45	GO:0009765: photosynthesis, light harvesting	3.21E-04
46	GO:0010021: amylopectin biosynthetic process	3.21E-04
47	GO:0016123: xanthophyll biosynthetic process	4.78E-04
48	GO:0032502: developmental process	4.93E-04
49	GO:0010207: photosystem II assembly	5.74E-04
50	GO:0010190: cytochrome b6f complex assembly	6.61E-04
51	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.61E-04
52	GO:1902458: positive regulation of stomatal opening	8.44E-04
53	GO:0051775: response to redox state	8.44E-04
54	GO:0000476: maturation of 4.5S rRNA	8.44E-04
55	GO:0034337: RNA folding	8.44E-04
56	GO:0009443: pyridoxal 5'-phosphate salvage	8.44E-04
57	GO:0000967: rRNA 5'-end processing	8.44E-04
58	GO:2000905: negative regulation of starch metabolic process	8.44E-04
59	GO:0009090: homoserine biosynthetic process	8.44E-04
60	GO:0005991: trehalose metabolic process	8.44E-04
61	GO:0010450: inflorescence meristem growth	8.44E-04
62	GO:0031426: polycistronic mRNA processing	8.44E-04
63	GO:0043266: regulation of potassium ion transport	8.44E-04
64	GO:0010063: positive regulation of trichoblast fate specification	8.44E-04
65	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	8.44E-04
66	GO:0010080: regulation of floral meristem growth	8.44E-04
67	GO:0000481: maturation of 5S rRNA	8.44E-04
68	GO:0006659: phosphatidylserine biosynthetic process	8.44E-04
69	GO:0006551: leucine metabolic process	8.44E-04
70	GO:2000021: regulation of ion homeostasis	8.44E-04
71	GO:0051247: positive regulation of protein metabolic process	8.44E-04
72	GO:0042372: phylloquinone biosynthetic process	8.73E-04
73	GO:1901259: chloroplast rRNA processing	8.73E-04
74	GO:0048564: photosystem I assembly	1.38E-03
75	GO:0006605: protein targeting	1.38E-03
76	GO:0032544: plastid translation	1.69E-03
77	GO:0009657: plastid organization	1.69E-03
78	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.83E-03
79	GO:0006568: tryptophan metabolic process	1.83E-03
80	GO:0010024: phytochromobilin biosynthetic process	1.83E-03
81	GO:0051262: protein tetramerization	1.83E-03
82	GO:0034470: ncRNA processing	1.83E-03
83	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.83E-03
84	GO:0018026: peptidyl-lysine monomethylation	1.83E-03
85	GO:0060359: response to ammonium ion	1.83E-03
86	GO:0048255: mRNA stabilization	1.83E-03
87	GO:1904143: positive regulation of carotenoid biosynthetic process	1.83E-03
88	GO:0001682: tRNA 5'-leader removal	1.83E-03
89	GO:0048507: meristem development	2.03E-03
90	GO:0008654: phospholipid biosynthetic process	2.56E-03
91	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3.04E-03
92	GO:0048586: regulation of long-day photoperiodism, flowering	3.04E-03
93	GO:0006954: inflammatory response	3.04E-03
94	GO:0031145: anaphase-promoting complex-dependent catabolic process	3.04E-03
95	GO:0048281: inflorescence morphogenesis	3.04E-03
96	GO:0010623: programmed cell death involved in cell development	3.04E-03
97	GO:0006696: ergosterol biosynthetic process	3.04E-03
98	GO:0006788: heme oxidation	3.04E-03
99	GO:0010022: meristem determinacy	3.04E-03
100	GO:0043157: response to cation stress	3.04E-03
101	GO:0045165: cell fate commitment	3.04E-03
102	GO:0019684: photosynthesis, light reaction	3.27E-03
103	GO:0009089: lysine biosynthetic process via diaminopimelate	3.27E-03
104	GO:0043085: positive regulation of catalytic activity	3.27E-03
105	GO:0006352: DNA-templated transcription, initiation	3.27E-03
106	GO:0009773: photosynthetic electron transport in photosystem I	3.27E-03
107	GO:0006415: translational termination	3.27E-03
108	GO:0016024: CDP-diacylglycerol biosynthetic process	3.76E-03
109	GO:0009767: photosynthetic electron transport chain	4.28E-03
110	GO:0006166: purine ribonucleoside salvage	4.43E-03
111	GO:0009052: pentose-phosphate shunt, non-oxidative branch	4.43E-03
112	GO:0010071: root meristem specification	4.43E-03
113	GO:0010306: rhamnogalacturonan II biosynthetic process	4.43E-03
114	GO:0009226: nucleotide-sugar biosynthetic process	4.43E-03
115	GO:0007231: osmosensory signaling pathway	4.43E-03
116	GO:0009102: biotin biosynthetic process	4.43E-03
117	GO:0030071: regulation of mitotic metaphase/anaphase transition	4.43E-03
118	GO:0046739: transport of virus in multicellular host	4.43E-03
119	GO:0006107: oxaloacetate metabolic process	4.43E-03
120	GO:0010239: chloroplast mRNA processing	4.43E-03
121	GO:0006168: adenine salvage	4.43E-03
122	GO:0019048: modulation by virus of host morphology or physiology	4.43E-03
123	GO:0043572: plastid fission	4.43E-03
124	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.43E-03
125	GO:0051016: barbed-end actin filament capping	4.43E-03
126	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	4.43E-03
127	GO:0090308: regulation of methylation-dependent chromatin silencing	4.43E-03
128	GO:0042989: sequestering of actin monomers	4.43E-03
129	GO:0031048: chromatin silencing by small RNA	4.43E-03
130	GO:0010148: transpiration	4.43E-03
131	GO:0009067: aspartate family amino acid biosynthetic process	4.43E-03
132	GO:0009451: RNA modification	4.60E-03
133	GO:0010020: chloroplast fission	4.84E-03
134	GO:0010107: potassium ion import	5.99E-03
135	GO:0010109: regulation of photosynthesis	5.99E-03
136	GO:2000122: negative regulation of stomatal complex development	5.99E-03
137	GO:0033500: carbohydrate homeostasis	5.99E-03
138	GO:0031122: cytoplasmic microtubule organization	5.99E-03
139	GO:0006546: glycine catabolic process	5.99E-03
140	GO:0006021: inositol biosynthetic process	5.99E-03
141	GO:0006661: phosphatidylinositol biosynthetic process	5.99E-03
142	GO:2000306: positive regulation of photomorphogenesis	5.99E-03
143	GO:0006109: regulation of carbohydrate metabolic process	5.99E-03
144	GO:0006734: NADH metabolic process	5.99E-03
145	GO:0051567: histone H3-K9 methylation	5.99E-03
146	GO:0010508: positive regulation of autophagy	5.99E-03
147	GO:0009944: polarity specification of adaxial/abaxial axis	6.74E-03
148	GO:0007017: microtubule-based process	7.46E-03
149	GO:0009742: brassinosteroid mediated signaling pathway	7.57E-03
150	GO:0009107: lipoate biosynthetic process	7.71E-03
151	GO:0000304: response to singlet oxygen	7.71E-03
152	GO:0080110: sporopollenin biosynthetic process	7.71E-03
153	GO:1902183: regulation of shoot apical meristem development	7.71E-03
154	GO:0044209: AMP salvage	7.71E-03
155	GO:0030041: actin filament polymerization	7.71E-03
156	GO:0032543: mitochondrial translation	7.71E-03
157	GO:0010158: abaxial cell fate specification	7.71E-03
158	GO:0098719: sodium ion import across plasma membrane	7.71E-03
159	GO:0032876: negative regulation of DNA endoreduplication	7.71E-03
160	GO:0006564: L-serine biosynthetic process	7.71E-03
161	GO:0010375: stomatal complex patterning	7.71E-03
162	GO:0010236: plastoquinone biosynthetic process	7.71E-03
163	GO:0016120: carotene biosynthetic process	7.71E-03
164	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	9.59E-03
165	GO:0006655: phosphatidylglycerol biosynthetic process	9.59E-03
166	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.59E-03
167	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.59E-03
168	GO:0009959: negative gravitropism	9.59E-03
169	GO:0016458: gene silencing	9.59E-03
170	GO:0016554: cytidine to uridine editing	9.59E-03
171	GO:0050665: hydrogen peroxide biosynthetic process	9.59E-03
172	GO:0032973: amino acid export	9.59E-03
173	GO:0000741: karyogamy	9.59E-03
174	GO:0080086: stamen filament development	1.16E-02
175	GO:0009082: branched-chain amino acid biosynthetic process	1.16E-02
176	GO:0006458: 'de novo' protein folding	1.16E-02
177	GO:0016117: carotenoid biosynthetic process	1.16E-02
178	GO:0017148: negative regulation of translation	1.16E-02
179	GO:0048280: vesicle fusion with Golgi apparatus	1.16E-02
180	GO:0009099: valine biosynthetic process	1.16E-02
181	GO:0010189: vitamin E biosynthetic process	1.16E-02
182	GO:0042026: protein refolding	1.16E-02
183	GO:0009854: oxidative photosynthetic carbon pathway	1.16E-02
184	GO:0009088: threonine biosynthetic process	1.16E-02
185	GO:0010019: chloroplast-nucleus signaling pathway	1.16E-02
186	GO:0009790: embryo development	1.24E-02
187	GO:0008033: tRNA processing	1.26E-02
188	GO:0010087: phloem or xylem histogenesis	1.26E-02
189	GO:0006662: glycerol ether metabolic process	1.36E-02
190	GO:0010182: sugar mediated signaling pathway	1.36E-02
191	GO:0048868: pollen tube development	1.36E-02
192	GO:0010305: leaf vascular tissue pattern formation	1.36E-02
193	GO:0010374: stomatal complex development	1.38E-02
194	GO:0070370: cellular heat acclimation	1.38E-02
195	GO:0009395: phospholipid catabolic process	1.38E-02
196	GO:0009772: photosynthetic electron transport in photosystem II	1.38E-02
197	GO:0043090: amino acid import	1.38E-02
198	GO:0010444: guard mother cell differentiation	1.38E-02
199	GO:0051693: actin filament capping	1.38E-02
200	GO:0006400: tRNA modification	1.38E-02
201	GO:0051510: regulation of unidimensional cell growth	1.38E-02
202	GO:0048437: floral organ development	1.38E-02
203	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.38E-02
204	GO:0010103: stomatal complex morphogenesis	1.38E-02
205	GO:0009646: response to absence of light	1.46E-02
206	GO:0040008: regulation of growth	1.49E-02
207	GO:0009791: post-embryonic development	1.57E-02
208	GO:0019252: starch biosynthetic process	1.57E-02
209	GO:0070413: trehalose metabolism in response to stress	1.61E-02
210	GO:0007155: cell adhesion	1.61E-02
211	GO:0009690: cytokinin metabolic process	1.61E-02
212	GO:0010078: maintenance of root meristem identity	1.61E-02
213	GO:0032875: regulation of DNA endoreduplication	1.61E-02
214	GO:0032508: DNA duplex unwinding	1.61E-02
215	GO:2000070: regulation of response to water deprivation	1.61E-02
216	GO:0055075: potassium ion homeostasis	1.61E-02
217	GO:0042255: ribosome assembly	1.61E-02
218	GO:0046620: regulation of organ growth	1.61E-02
219	GO:0006353: DNA-templated transcription, termination	1.61E-02
220	GO:0055114: oxidation-reduction process	1.77E-02
221	GO:0010583: response to cyclopentenone	1.80E-02
222	GO:0051603: proteolysis involved in cellular protein catabolic process	1.83E-02
223	GO:0001558: regulation of cell growth	1.85E-02
224	GO:0010093: specification of floral organ identity	1.85E-02
225	GO:0010052: guard cell differentiation	1.85E-02
226	GO:0015996: chlorophyll catabolic process	1.85E-02
227	GO:0009097: isoleucine biosynthetic process	1.85E-02
228	GO:0010204: defense response signaling pathway, resistance gene-independent	1.85E-02
229	GO:0007186: G-protein coupled receptor signaling pathway	1.85E-02
230	GO:0010497: plasmodesmata-mediated intercellular transport	1.85E-02
231	GO:0043562: cellular response to nitrogen levels	1.85E-02
232	GO:0017004: cytochrome complex assembly	1.85E-02
233	GO:0010206: photosystem II repair	2.11E-02
234	GO:0080144: amino acid homeostasis	2.11E-02
235	GO:2000024: regulation of leaf development	2.11E-02
236	GO:0090333: regulation of stomatal closure	2.11E-02
237	GO:0046916: cellular transition metal ion homeostasis	2.11E-02
238	GO:0046685: response to arsenic-containing substance	2.11E-02
239	GO:0009051: pentose-phosphate shunt, oxidative branch	2.11E-02
240	GO:0000373: Group II intron splicing	2.11E-02
241	GO:0000902: cell morphogenesis	2.11E-02
242	GO:0006810: transport	2.18E-02
243	GO:0005975: carbohydrate metabolic process	2.36E-02
244	GO:0009638: phototropism	2.37E-02
245	GO:0006779: porphyrin-containing compound biosynthetic process	2.37E-02
246	GO:0009086: methionine biosynthetic process	2.37E-02
247	GO:0031425: chloroplast RNA processing	2.37E-02
248	GO:0051453: regulation of intracellular pH	2.37E-02
249	GO:0009299: mRNA transcription	2.65E-02
250	GO:0006896: Golgi to vacuole transport	2.65E-02
251	GO:0006782: protoporphyrinogen IX biosynthetic process	2.65E-02
252	GO:0030422: production of siRNA involved in RNA interference	2.65E-02
253	GO:0019538: protein metabolic process	2.65E-02
254	GO:0045036: protein targeting to chloroplast	2.65E-02
255	GO:0009641: shade avoidance	2.65E-02
256	GO:0009416: response to light stimulus	2.79E-02
257	GO:0006397: mRNA processing	2.89E-02
258	GO:0010216: maintenance of DNA methylation	2.94E-02
259	GO:0009684: indoleacetic acid biosynthetic process	2.94E-02
260	GO:0009073: aromatic amino acid family biosynthetic process	2.94E-02
261	GO:0006816: calcium ion transport	2.94E-02
262	GO:0018119: peptidyl-cysteine S-nitrosylation	2.94E-02
263	GO:0018298: protein-chromophore linkage	3.20E-02
264	GO:0005983: starch catabolic process	3.24E-02
265	GO:0045037: protein import into chloroplast stroma	3.24E-02
266	GO:0010582: floral meristem determinacy	3.24E-02
267	GO:0009725: response to hormone	3.55E-02
268	GO:0010628: positive regulation of gene expression	3.55E-02
269	GO:0006108: malate metabolic process	3.55E-02
270	GO:0010588: cotyledon vascular tissue pattern formation	3.55E-02
271	GO:0030036: actin cytoskeleton organization	3.55E-02
272	GO:0050826: response to freezing	3.55E-02
273	GO:0009718: anthocyanin-containing compound biosynthetic process	3.55E-02
274	GO:0048527: lateral root development	3.69E-02
275	GO:0009934: regulation of meristem structural organization	3.87E-02
276	GO:0048467: gynoecium development	3.87E-02
277	GO:0007015: actin filament organization	3.87E-02
278	GO:0010143: cutin biosynthetic process	3.87E-02
279	GO:0009933: meristem structural organization	3.87E-02
280	GO:0045087: innate immune response	4.05E-02
281	GO:0019853: L-ascorbic acid biosynthetic process	4.20E-02
282	GO:0090351: seedling development	4.20E-02
283	GO:0010030: positive regulation of seed germination	4.20E-02
284	GO:0070588: calcium ion transmembrane transport	4.20E-02
285	GO:0034599: cellular response to oxidative stress	4.23E-02
286	GO:0006839: mitochondrial transport	4.61E-02
287	GO:0007010: cytoskeleton organization	4.88E-02
288	GO:0005992: trehalose biosynthetic process	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0046905: phytoene synthase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
4	GO:0005048: signal sequence binding	0.00E+00
5	GO:0050613: delta14-sterol reductase activity	0.00E+00
6	GO:0004076: biotin synthase activity	0.00E+00
7	GO:0010276: phytol kinase activity	0.00E+00
8	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
9	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
10	GO:0004823: leucine-tRNA ligase activity	0.00E+00
11	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
12	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
13	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
14	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
15	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
16	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
17	GO:0019156: isoamylase activity	2.98E-05
18	GO:0019899: enzyme binding	6.69E-05
19	GO:0005528: FK506 binding	9.13E-05
20	GO:0070402: NADPH binding	9.44E-05
21	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.25E-04
22	GO:0016851: magnesium chelatase activity	1.93E-04
23	GO:0003723: RNA binding	2.35E-04
24	GO:0001053: plastid sigma factor activity	3.21E-04
25	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.21E-04
26	GO:0016987: sigma factor activity	3.21E-04
27	GO:0043495: protein anchor	3.21E-04
28	GO:0016773: phosphotransferase activity, alcohol group as acceptor	4.78E-04
29	GO:0004556: alpha-amylase activity	6.61E-04
30	GO:0004462: lactoylglutathione lyase activity	6.61E-04
31	GO:0016597: amino acid binding	7.25E-04
32	GO:0051777: ent-kaurenoate oxidase activity	8.44E-04
33	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	8.44E-04
34	GO:0004856: xylulokinase activity	8.44E-04
35	GO:0008568: microtubule-severing ATPase activity	8.44E-04
36	GO:0046906: tetrapyrrole binding	8.44E-04
37	GO:0019203: carbohydrate phosphatase activity	8.44E-04
38	GO:0005227: calcium activated cation channel activity	8.44E-04
39	GO:0004425: indole-3-glycerol-phosphate synthase activity	8.44E-04
40	GO:0003984: acetolactate synthase activity	8.44E-04
41	GO:0016776: phosphotransferase activity, phosphate group as acceptor	8.44E-04
42	GO:0005080: protein kinase C binding	8.44E-04
43	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	8.44E-04
44	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.44E-04
45	GO:0080042: ADP-glucose pyrophosphohydrolase activity	8.44E-04
46	GO:0008746: NAD(P)+ transhydrogenase activity	8.44E-04
47	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	8.44E-04
48	GO:0050308: sugar-phosphatase activity	8.44E-04
49	GO:0004328: formamidase activity	8.44E-04
50	GO:0051996: squalene synthase activity	8.44E-04
51	GO:0004033: aldo-keto reductase (NADP) activity	1.38E-03
52	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.83E-03
53	GO:0043425: bHLH transcription factor binding	1.83E-03
54	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.83E-03
55	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.83E-03
56	GO:0004617: phosphoglycerate dehydrogenase activity	1.83E-03
57	GO:0004047: aminomethyltransferase activity	1.83E-03
58	GO:0004802: transketolase activity	1.83E-03
59	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.83E-03
60	GO:0004312: fatty acid synthase activity	1.83E-03
61	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.83E-03
62	GO:0017118: lipoyltransferase activity	1.83E-03
63	GO:0004412: homoserine dehydrogenase activity	1.83E-03
64	GO:0004512: inositol-3-phosphate synthase activity	1.83E-03
65	GO:0048531: beta-1,3-galactosyltransferase activity	1.83E-03
66	GO:0003993: acid phosphatase activity	1.84E-03
67	GO:0003747: translation release factor activity	2.03E-03
68	GO:0019843: rRNA binding	2.49E-03
69	GO:0048038: quinone binding	2.80E-03
70	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.04E-03
71	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.04E-03
72	GO:0004180: carboxypeptidase activity	3.04E-03
73	GO:0004751: ribose-5-phosphate isomerase activity	3.04E-03
74	GO:0016992: lipoate synthase activity	3.04E-03
75	GO:0003913: DNA photolyase activity	3.04E-03
76	GO:0002161: aminoacyl-tRNA editing activity	3.04E-03
77	GO:0016805: dipeptidase activity	3.04E-03
78	GO:0004148: dihydrolipoyl dehydrogenase activity	3.04E-03
79	GO:0003924: GTPase activity	3.07E-03
80	GO:0004519: endonuclease activity	3.70E-03
81	GO:0031072: heat shock protein binding	4.28E-03
82	GO:0017057: 6-phosphogluconolactonase activity	4.43E-03
83	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	4.43E-03
84	GO:0003999: adenine phosphoribosyltransferase activity	4.43E-03
85	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.43E-03
86	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	4.43E-03
87	GO:0016149: translation release factor activity, codon specific	4.43E-03
88	GO:0004072: aspartate kinase activity	4.43E-03
89	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	4.43E-03
90	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	4.43E-03
91	GO:0048027: mRNA 5'-UTR binding	4.43E-03
92	GO:0043023: ribosomal large subunit binding	4.43E-03
93	GO:0035197: siRNA binding	4.43E-03
94	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.43E-03
95	GO:0008266: poly(U) RNA binding	4.84E-03
96	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	5.99E-03
97	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	5.99E-03
98	GO:0004045: aminoacyl-tRNA hydrolase activity	5.99E-03
99	GO:0080032: methyl jasmonate esterase activity	5.99E-03
100	GO:0042277: peptide binding	5.99E-03
101	GO:0004392: heme oxygenase (decyclizing) activity	5.99E-03
102	GO:0008891: glycolate oxidase activity	5.99E-03
103	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.99E-03
104	GO:0019199: transmembrane receptor protein kinase activity	5.99E-03
105	GO:0004659: prenyltransferase activity	5.99E-03
106	GO:0016279: protein-lysine N-methyltransferase activity	5.99E-03
107	GO:0004222: metalloendopeptidase activity	7.19E-03
108	GO:0008374: O-acyltransferase activity	7.71E-03
109	GO:0016846: carbon-sulfur lyase activity	7.71E-03
110	GO:0003785: actin monomer binding	7.71E-03
111	GO:2001070: starch binding	9.59E-03
112	GO:0004605: phosphatidate cytidylyltransferase activity	9.59E-03
113	GO:0080030: methyl indole-3-acetate esterase activity	9.59E-03
114	GO:0016208: AMP binding	9.59E-03
115	GO:0004526: ribonuclease P activity	9.59E-03
116	GO:0015081: sodium ion transmembrane transporter activity	9.59E-03
117	GO:0016615: malate dehydrogenase activity	9.59E-03
118	GO:0008200: ion channel inhibitor activity	9.59E-03
119	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	9.59E-03
120	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	9.59E-03
121	GO:0022891: substrate-specific transmembrane transporter activity	9.84E-03
122	GO:0030570: pectate lyase activity	9.84E-03
123	GO:0003824: catalytic activity	1.07E-02
124	GO:0008195: phosphatidate phosphatase activity	1.16E-02
125	GO:0003730: mRNA 3'-UTR binding	1.16E-02
126	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.16E-02
127	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.16E-02
128	GO:0047134: protein-disulfide reductase activity	1.16E-02
129	GO:0030060: L-malate dehydrogenase activity	1.16E-02
130	GO:0005261: cation channel activity	1.16E-02
131	GO:0004185: serine-type carboxypeptidase activity	1.19E-02
132	GO:0005525: GTP binding	1.26E-02
133	GO:0004791: thioredoxin-disulfide reductase activity	1.46E-02
134	GO:0008312: 7S RNA binding	1.61E-02
135	GO:0003690: double-stranded DNA binding	1.83E-02
136	GO:0046914: transition metal ion binding	1.85E-02
137	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.92E-02
138	GO:0016791: phosphatase activity	2.05E-02
139	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.11E-02
140	GO:0005200: structural constituent of cytoskeleton	2.18E-02
141	GO:0008483: transaminase activity	2.18E-02
142	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.18E-02
143	GO:0042802: identical protein binding	2.28E-02
144	GO:0004743: pyruvate kinase activity	2.37E-02
145	GO:0030955: potassium ion binding	2.37E-02
146	GO:0016168: chlorophyll binding	2.59E-02
147	GO:0008047: enzyme activator activity	2.65E-02
148	GO:0015020: glucuronosyltransferase activity	2.65E-02
149	GO:0051082: unfolded protein binding	2.73E-02
150	GO:0004721: phosphoprotein phosphatase activity	2.88E-02
151	GO:0044183: protein binding involved in protein folding	2.94E-02
152	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.94E-02
153	GO:0015386: potassium:proton antiporter activity	2.94E-02
154	GO:0008559: xenobiotic-transporting ATPase activity	2.94E-02
155	GO:0016788: hydrolase activity, acting on ester bonds	3.14E-02
156	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.20E-02
157	GO:0008378: galactosyltransferase activity	3.24E-02
158	GO:0004521: endoribonuclease activity	3.24E-02
159	GO:0003725: double-stranded RNA binding	3.55E-02
160	GO:0005262: calcium channel activity	3.55E-02
161	GO:0009982: pseudouridine synthase activity	3.55E-02
162	GO:0008081: phosphoric diester hydrolase activity	3.55E-02
163	GO:0004089: carbonate dehydratase activity	3.55E-02
164	GO:0016491: oxidoreductase activity	3.70E-02
165	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.87E-02
166	GO:0016829: lyase activity	3.98E-02
167	GO:0003746: translation elongation factor activity	4.05E-02
168	GO:0008146: sulfotransferase activity	4.20E-02
169	GO:0004857: enzyme inhibitor activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0005948: acetolactate synthase complex	0.00E+00
3	GO:0009507: chloroplast	3.65E-56
4	GO:0009570: chloroplast stroma	1.05E-26
5	GO:0009535: chloroplast thylakoid membrane	1.40E-15
6	GO:0009543: chloroplast thylakoid lumen	7.96E-11
7	GO:0009534: chloroplast thylakoid	1.61E-08
8	GO:0009941: chloroplast envelope	4.49E-08
9	GO:0009579: thylakoid	6.46E-07
10	GO:0009654: photosystem II oxygen evolving complex	6.68E-06
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.16E-06
12	GO:0031977: thylakoid lumen	7.17E-06
13	GO:0031969: chloroplast membrane	1.67E-05
14	GO:0080085: signal recognition particle, chloroplast targeting	2.98E-05
15	GO:0009508: plastid chromosome	3.71E-05
16	GO:0009295: nucleoid	9.02E-05
17	GO:0010007: magnesium chelatase complex	9.44E-05
18	GO:0042651: thylakoid membrane	1.10E-04
19	GO:0019898: extrinsic component of membrane	3.97E-04
20	GO:0030529: intracellular ribonucleoprotein complex	7.93E-04
21	GO:0009344: nitrite reductase complex [NAD(P)H]	8.44E-04
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.69E-03
23	GO:0008290: F-actin capping protein complex	1.83E-03
24	GO:0042644: chloroplast nucleoid	2.03E-03
25	GO:0009528: plastid inner membrane	3.04E-03
26	GO:0010319: stromule	3.87E-03
27	GO:0015630: microtubule cytoskeleton	4.43E-03
28	GO:0005719: nuclear euchromatin	4.43E-03
29	GO:0042646: plastid nucleoid	4.43E-03
30	GO:0030095: chloroplast photosystem II	4.84E-03
31	GO:0030663: COPI-coated vesicle membrane	5.99E-03
32	GO:0009527: plastid outer membrane	5.99E-03
33	GO:0009536: plastid	6.00E-03
34	GO:0042807: central vacuole	1.38E-02
35	GO:0009533: chloroplast stromal thylakoid	1.38E-02
36	GO:0009523: photosystem II	1.57E-02
37	GO:0009501: amyloplast	1.61E-02
38	GO:0012507: ER to Golgi transport vesicle membrane	1.61E-02
39	GO:0009539: photosystem II reaction center	1.85E-02
40	GO:0000326: protein storage vacuole	1.85E-02
41	GO:0005720: nuclear heterochromatin	2.11E-02
42	GO:0005680: anaphase-promoting complex	2.11E-02
43	GO:0045298: tubulin complex	2.11E-02
44	GO:0015030: Cajal body	2.37E-02
45	GO:0016604: nuclear body	2.37E-02
46	GO:0030125: clathrin vesicle coat	2.65E-02
47	GO:0009706: chloroplast inner membrane	2.73E-02
48	GO:0009707: chloroplast outer membrane	3.20E-02
49	GO:0000311: plastid large ribosomal subunit	3.24E-02
50	GO:0032040: small-subunit processome	3.24E-02
51	GO:0005938: cell cortex	3.55E-02
52	GO:0000325: plant-type vacuole	3.69E-02
53	GO:0016020: membrane	4.19E-02
54	GO:0030176: integral component of endoplasmic reticulum membrane	4.20E-02
55	GO:0043234: protein complex	4.53E-02