co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G55470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0070588: calcium ion transmembrane transport	2.14E-05
3	GO:0045088: regulation of innate immune response	2.16E-05
4	GO:0046470: phosphatidylcholine metabolic process	9.72E-05
5	GO:0006952: defense response	1.31E-04
6	GO:0009626: plant-type hypersensitive response	1.33E-04
7	GO:0007229: integrin-mediated signaling pathway	1.67E-04
8	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.67E-04
9	GO:0015784: GDP-mannose transport	1.67E-04
10	GO:0010365: positive regulation of ethylene biosynthetic process	1.67E-04
11	GO:0051938: L-glutamate import	1.67E-04
12	GO:0051245: negative regulation of cellular defense response	1.67E-04
13	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.67E-04
14	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.67E-04
15	GO:0006643: membrane lipid metabolic process	1.67E-04
16	GO:0010045: response to nickel cation	1.67E-04
17	GO:0043069: negative regulation of programmed cell death	2.70E-04
18	GO:0007064: mitotic sister chromatid cohesion	2.70E-04
19	GO:0010042: response to manganese ion	3.78E-04
20	GO:0002221: pattern recognition receptor signaling pathway	3.78E-04
21	GO:0043091: L-arginine import	3.78E-04
22	GO:0015802: basic amino acid transport	3.78E-04
23	GO:0002237: response to molecule of bacterial origin	4.63E-04
24	GO:0009062: fatty acid catabolic process	6.19E-04
25	GO:0051176: positive regulation of sulfur metabolic process	6.19E-04
26	GO:0015783: GDP-fucose transport	6.19E-04
27	GO:0048281: inflorescence morphogenesis	6.19E-04
28	GO:0010581: regulation of starch biosynthetic process	6.19E-04
29	GO:0002230: positive regulation of defense response to virus by host	6.19E-04
30	GO:0016226: iron-sulfur cluster assembly	8.40E-04
31	GO:0015696: ammonium transport	8.83E-04
32	GO:0000187: activation of MAPK activity	8.83E-04
33	GO:0046713: borate transport	8.83E-04
34	GO:0033014: tetrapyrrole biosynthetic process	8.83E-04
35	GO:0010306: rhamnogalacturonan II biosynthetic process	8.83E-04
36	GO:0006612: protein targeting to membrane	8.83E-04
37	GO:0042742: defense response to bacterium	9.67E-04
38	GO:0006468: protein phosphorylation	1.13E-03
39	GO:0080142: regulation of salicylic acid biosynthetic process	1.17E-03
40	GO:0046345: abscisic acid catabolic process	1.17E-03
41	GO:0072488: ammonium transmembrane transport	1.17E-03
42	GO:0010363: regulation of plant-type hypersensitive response	1.17E-03
43	GO:0010508: positive regulation of autophagy	1.17E-03
44	GO:0010225: response to UV-C	1.48E-03
45	GO:0009697: salicylic acid biosynthetic process	1.48E-03
46	GO:0006891: intra-Golgi vesicle-mediated transport	1.52E-03
47	GO:0002229: defense response to oomycetes	1.52E-03
48	GO:1900425: negative regulation of defense response to bacterium	1.83E-03
49	GO:2000037: regulation of stomatal complex patterning	2.19E-03
50	GO:0042372: phylloquinone biosynthetic process	2.19E-03
51	GO:0010038: response to metal ion	2.58E-03
52	GO:0010044: response to aluminum ion	2.58E-03
53	GO:1900056: negative regulation of leaf senescence	2.58E-03
54	GO:0007166: cell surface receptor signaling pathway	3.00E-03
55	GO:0010468: regulation of gene expression	3.17E-03
56	GO:0048193: Golgi vesicle transport	3.41E-03
57	GO:0006979: response to oxidative stress	3.75E-03
58	GO:0090333: regulation of stomatal closure	3.86E-03
59	GO:0006783: heme biosynthetic process	3.86E-03
60	GO:0007165: signal transduction	4.11E-03
61	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.81E-03
62	GO:0006032: chitin catabolic process	4.81E-03
63	GO:0000272: polysaccharide catabolic process	5.32E-03
64	GO:0080167: response to karrikin	5.80E-03
65	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.84E-03
66	GO:0012501: programmed cell death	5.84E-03
67	GO:0010200: response to chitin	6.05E-03
68	GO:0046777: protein autophosphorylation	6.31E-03
69	GO:0010229: inflorescence development	6.38E-03
70	GO:0009785: blue light signaling pathway	6.38E-03
71	GO:0009909: regulation of flower development	6.87E-03
72	GO:0007034: vacuolar transport	6.93E-03
73	GO:0034605: cellular response to heat	6.93E-03
74	GO:0042343: indole glucosinolate metabolic process	7.50E-03
75	GO:0006487: protein N-linked glycosylation	8.70E-03
76	GO:0009863: salicylic acid mediated signaling pathway	8.70E-03
77	GO:0003333: amino acid transmembrane transport	9.97E-03
78	GO:0016998: cell wall macromolecule catabolic process	9.97E-03
79	GO:0098542: defense response to other organism	9.97E-03
80	GO:0048278: vesicle docking	9.97E-03
81	GO:0031348: negative regulation of defense response	1.06E-02
82	GO:0010017: red or far-red light signaling pathway	1.06E-02
83	GO:0009814: defense response, incompatible interaction	1.06E-02
84	GO:0001944: vasculature development	1.13E-02
85	GO:0010227: floral organ abscission	1.13E-02
86	GO:0042147: retrograde transport, endosome to Golgi	1.27E-02
87	GO:0070417: cellular response to cold	1.27E-02
88	GO:0000271: polysaccharide biosynthetic process	1.34E-02
89	GO:0010118: stomatal movement	1.34E-02
90	GO:0042391: regulation of membrane potential	1.34E-02
91	GO:0045489: pectin biosynthetic process	1.41E-02
92	GO:0071472: cellular response to salt stress	1.41E-02
93	GO:0061025: membrane fusion	1.49E-02
94	GO:0006635: fatty acid beta-oxidation	1.64E-02
95	GO:0010193: response to ozone	1.64E-02
96	GO:0016032: viral process	1.72E-02
97	GO:0051607: defense response to virus	2.04E-02
98	GO:0000910: cytokinesis	2.04E-02
99	GO:0035556: intracellular signal transduction	2.11E-02
100	GO:0001666: response to hypoxia	2.13E-02
101	GO:0009615: response to virus	2.13E-02
102	GO:0009911: positive regulation of flower development	2.13E-02
103	GO:0009816: defense response to bacterium, incompatible interaction	2.22E-02
104	GO:0009627: systemic acquired resistance	2.30E-02
105	GO:0006906: vesicle fusion	2.30E-02
106	GO:0048573: photoperiodism, flowering	2.39E-02
107	GO:0015995: chlorophyll biosynthetic process	2.39E-02
108	GO:0050832: defense response to fungus	2.43E-02
109	GO:0016049: cell growth	2.48E-02
110	GO:0008219: cell death	2.57E-02
111	GO:0010043: response to zinc ion	2.85E-02
112	GO:0016051: carbohydrate biosynthetic process	3.05E-02
113	GO:0009867: jasmonic acid mediated signaling pathway	3.05E-02
114	GO:0044550: secondary metabolite biosynthetic process	3.20E-02
115	GO:0006887: exocytosis	3.44E-02
116	GO:0042542: response to hydrogen peroxide	3.55E-02
117	GO:0006886: intracellular protein transport	3.64E-02
118	GO:0051707: response to other organism	3.65E-02
119	GO:0009640: photomorphogenesis	3.65E-02
120	GO:0000209: protein polyubiquitination	3.75E-02
121	GO:0008643: carbohydrate transport	3.86E-02
122	GO:0000165: MAPK cascade	4.18E-02
123	GO:0031347: regulation of defense response	4.18E-02
124	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.18E-02
125	GO:0016042: lipid catabolic process	4.21E-02
126	GO:0010224: response to UV-B	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0005388: calcium-transporting ATPase activity	1.43E-05
3	GO:0004630: phospholipase D activity	1.56E-04
4	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.56E-04
5	GO:0008909: isochorismate synthase activity	1.67E-04
6	GO:0008809: carnitine racemase activity	1.67E-04
7	GO:0015085: calcium ion transmembrane transporter activity	1.67E-04
8	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.67E-04
9	GO:0004325: ferrochelatase activity	1.67E-04
10	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.67E-04
11	GO:0016301: kinase activity	2.49E-04
12	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.78E-04
13	GO:0017110: nucleoside-diphosphatase activity	3.78E-04
14	GO:0005457: GDP-fucose transmembrane transporter activity	6.19E-04
15	GO:0005509: calcium ion binding	8.26E-04
16	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	8.83E-04
17	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.83E-04
18	GO:0015189: L-lysine transmembrane transporter activity	8.83E-04
19	GO:0015181: arginine transmembrane transporter activity	8.83E-04
20	GO:0043531: ADP binding	9.07E-04
21	GO:0005313: L-glutamate transmembrane transporter activity	1.17E-03
22	GO:0047631: ADP-ribose diphosphatase activity	1.48E-03
23	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.48E-03
24	GO:0010294: abscisic acid glucosyltransferase activity	1.48E-03
25	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.48E-03
26	GO:0000210: NAD+ diphosphatase activity	1.83E-03
27	GO:0035252: UDP-xylosyltransferase activity	1.83E-03
28	GO:0008519: ammonium transmembrane transporter activity	1.83E-03
29	GO:0005516: calmodulin binding	2.20E-03
30	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.32E-03
31	GO:0008375: acetylglucosaminyltransferase activity	2.43E-03
32	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.58E-03
33	GO:0004708: MAP kinase kinase activity	2.99E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.99E-03
35	GO:0015174: basic amino acid transmembrane transporter activity	4.33E-03
36	GO:0004568: chitinase activity	4.81E-03
37	GO:0008047: enzyme activator activity	4.81E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	5.32E-03
39	GO:0015095: magnesium ion transmembrane transporter activity	6.38E-03
40	GO:0008234: cysteine-type peptidase activity	6.87E-03
41	GO:0008061: chitin binding	7.50E-03
42	GO:0030552: cAMP binding	7.50E-03
43	GO:0030553: cGMP binding	7.50E-03
44	GO:0004674: protein serine/threonine kinase activity	7.96E-03
45	GO:0005524: ATP binding	8.23E-03
46	GO:0005216: ion channel activity	9.33E-03
47	GO:0033612: receptor serine/threonine kinase binding	9.97E-03
48	GO:0004707: MAP kinase activity	9.97E-03
49	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.06E-02
50	GO:0005249: voltage-gated potassium channel activity	1.34E-02
51	GO:0030551: cyclic nucleotide binding	1.34E-02
52	GO:0003713: transcription coactivator activity	1.41E-02
53	GO:0010181: FMN binding	1.49E-02
54	GO:0004197: cysteine-type endopeptidase activity	1.72E-02
55	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.96E-02
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.30E-02
57	GO:0004683: calmodulin-dependent protein kinase activity	2.39E-02
58	GO:0003682: chromatin binding	2.51E-02
59	GO:0016757: transferase activity, transferring glycosyl groups	3.04E-02
60	GO:0019825: oxygen binding	3.06E-02
61	GO:0000149: SNARE binding	3.24E-02
62	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.24E-02
63	GO:0005484: SNAP receptor activity	3.65E-02
64	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.80E-02
65	GO:0051537: 2 iron, 2 sulfur cluster binding	3.86E-02
66	GO:0051287: NAD binding	4.18E-02
67	GO:0003924: GTPase activity	4.34E-02
68	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.51E-02
69	GO:0005506: iron ion binding	4.63E-02
70	GO:0015171: amino acid transmembrane transporter activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.05E-04
2	GO:0005887: integral component of plasma membrane	3.12E-03
3	GO:0005795: Golgi stack	7.50E-03
4	GO:0010008: endosome membrane	7.58E-03
5	GO:0043234: protein complex	8.10E-03
6	GO:0005769: early endosome	8.10E-03
7	GO:0012505: endomembrane system	8.58E-03
8	GO:0005758: mitochondrial intermembrane space	8.70E-03
9	GO:0043231: intracellular membrane-bounded organelle	1.08E-02
10	GO:0016021: integral component of membrane	1.19E-02
11	GO:0009504: cell plate	1.56E-02
12	GO:0000139: Golgi membrane	2.15E-02
13	GO:0005794: Golgi apparatus	2.46E-02
14	GO:0000325: plant-type vacuole	2.85E-02
15	GO:0005737: cytoplasm	3.35E-02
16	GO:0031201: SNARE complex	3.44E-02