GO Enrichment Analysis of Co-expressed Genes with
AT3G55330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 4 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 5 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 6 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.48E-06 |
| 8 | GO:0006546: glycine catabolic process | 4.77E-06 |
| 9 | GO:0080093: regulation of photorespiration | 6.91E-05 |
| 10 | GO:0031998: regulation of fatty acid beta-oxidation | 6.91E-05 |
| 11 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.80E-05 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 8.80E-05 |
| 13 | GO:0009735: response to cytokinin | 9.33E-05 |
| 14 | GO:0010114: response to red light | 1.13E-04 |
| 15 | GO:0010143: cutin biosynthetic process | 1.36E-04 |
| 16 | GO:0071457: cellular response to ozone | 1.66E-04 |
| 17 | GO:0010198: synergid death | 1.66E-04 |
| 18 | GO:0015979: photosynthesis | 2.06E-04 |
| 19 | GO:0090391: granum assembly | 2.81E-04 |
| 20 | GO:0006424: glutamyl-tRNA aminoacylation | 4.06E-04 |
| 21 | GO:0071484: cellular response to light intensity | 4.06E-04 |
| 22 | GO:0006542: glutamine biosynthetic process | 5.42E-04 |
| 23 | GO:0019676: ammonia assimilation cycle | 5.42E-04 |
| 24 | GO:0071486: cellular response to high light intensity | 5.42E-04 |
| 25 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.42E-04 |
| 26 | GO:0045727: positive regulation of translation | 5.42E-04 |
| 27 | GO:0032543: mitochondrial translation | 6.87E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 6.87E-04 |
| 29 | GO:0006097: glyoxylate cycle | 6.87E-04 |
| 30 | GO:0071493: cellular response to UV-B | 6.87E-04 |
| 31 | GO:0009228: thiamine biosynthetic process | 8.40E-04 |
| 32 | GO:0006751: glutathione catabolic process | 8.40E-04 |
| 33 | GO:0042549: photosystem II stabilization | 8.40E-04 |
| 34 | GO:0006810: transport | 8.71E-04 |
| 35 | GO:0010189: vitamin E biosynthetic process | 9.99E-04 |
| 36 | GO:0009772: photosynthetic electron transport in photosystem II | 1.17E-03 |
| 37 | GO:0009657: plastid organization | 1.53E-03 |
| 38 | GO:0019430: removal of superoxide radicals | 1.53E-03 |
| 39 | GO:0032544: plastid translation | 1.53E-03 |
| 40 | GO:0006098: pentose-phosphate shunt | 1.73E-03 |
| 41 | GO:0009664: plant-type cell wall organization | 1.78E-03 |
| 42 | GO:0006949: syncytium formation | 2.14E-03 |
| 43 | GO:0006096: glycolytic process | 2.24E-03 |
| 44 | GO:0019684: photosynthesis, light reaction | 2.36E-03 |
| 45 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.36E-03 |
| 46 | GO:0000272: polysaccharide catabolic process | 2.36E-03 |
| 47 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.58E-03 |
| 48 | GO:0006108: malate metabolic process | 2.82E-03 |
| 49 | GO:0006094: gluconeogenesis | 2.82E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 2.82E-03 |
| 51 | GO:0019253: reductive pentose-phosphate cycle | 3.06E-03 |
| 52 | GO:0010207: photosystem II assembly | 3.06E-03 |
| 53 | GO:0007017: microtubule-based process | 4.08E-03 |
| 54 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.08E-03 |
| 55 | GO:0046686: response to cadmium ion | 4.30E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 4.35E-03 |
| 57 | GO:0009561: megagametogenesis | 5.20E-03 |
| 58 | GO:0042335: cuticle development | 5.80E-03 |
| 59 | GO:0042631: cellular response to water deprivation | 5.80E-03 |
| 60 | GO:0071472: cellular response to salt stress | 6.11E-03 |
| 61 | GO:0015986: ATP synthesis coupled proton transport | 6.42E-03 |
| 62 | GO:0009658: chloroplast organization | 7.13E-03 |
| 63 | GO:0006412: translation | 7.93E-03 |
| 64 | GO:0009828: plant-type cell wall loosening | 8.08E-03 |
| 65 | GO:0010027: thylakoid membrane organization | 9.13E-03 |
| 66 | GO:0006974: cellular response to DNA damage stimulus | 9.87E-03 |
| 67 | GO:0009627: systemic acquired resistance | 9.87E-03 |
| 68 | GO:0042128: nitrate assimilation | 9.87E-03 |
| 69 | GO:0042742: defense response to bacterium | 1.05E-02 |
| 70 | GO:0018298: protein-chromophore linkage | 1.10E-02 |
| 71 | GO:0009817: defense response to fungus, incompatible interaction | 1.10E-02 |
| 72 | GO:0010218: response to far red light | 1.18E-02 |
| 73 | GO:0010119: regulation of stomatal movement | 1.22E-02 |
| 74 | GO:0007568: aging | 1.22E-02 |
| 75 | GO:0032259: methylation | 1.25E-02 |
| 76 | GO:0016042: lipid catabolic process | 1.27E-02 |
| 77 | GO:0009637: response to blue light | 1.30E-02 |
| 78 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 79 | GO:0009409: response to cold | 1.54E-02 |
| 80 | GO:0006855: drug transmembrane transport | 1.74E-02 |
| 81 | GO:0006364: rRNA processing | 1.92E-02 |
| 82 | GO:0006486: protein glycosylation | 1.92E-02 |
| 83 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.97E-02 |
| 84 | GO:0006417: regulation of translation | 2.07E-02 |
| 85 | GO:0006396: RNA processing | 2.52E-02 |
| 86 | GO:0009742: brassinosteroid mediated signaling pathway | 2.58E-02 |
| 87 | GO:0006633: fatty acid biosynthetic process | 3.41E-02 |
| 88 | GO:0006413: translational initiation | 3.47E-02 |
| 89 | GO:0007623: circadian rhythm | 3.65E-02 |
| 90 | GO:0045490: pectin catabolic process | 3.65E-02 |
| 91 | GO:0009739: response to gibberellin | 3.95E-02 |
| 92 | GO:0010468: regulation of gene expression | 4.14E-02 |
| 93 | GO:0009826: unidimensional cell growth | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.77E-06 |
| 4 | GO:0019843: rRNA binding | 2.72E-05 |
| 5 | GO:0009374: biotin binding | 6.91E-05 |
| 6 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 6.91E-05 |
| 7 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 6.91E-05 |
| 8 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.66E-04 |
| 9 | GO:0004618: phosphoglycerate kinase activity | 1.66E-04 |
| 10 | GO:0010297: heteropolysaccharide binding | 1.66E-04 |
| 11 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.66E-04 |
| 12 | GO:0004047: aminomethyltransferase activity | 1.66E-04 |
| 13 | GO:0005528: FK506 binding | 1.94E-04 |
| 14 | GO:0050734: hydroxycinnamoyltransferase activity | 2.81E-04 |
| 15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.06E-04 |
| 16 | GO:0048038: quinone binding | 4.85E-04 |
| 17 | GO:0004356: glutamate-ammonia ligase activity | 6.87E-04 |
| 18 | GO:0003989: acetyl-CoA carboxylase activity | 6.87E-04 |
| 19 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 8.40E-04 |
| 20 | GO:0004784: superoxide dismutase activity | 8.40E-04 |
| 21 | GO:0016615: malate dehydrogenase activity | 8.40E-04 |
| 22 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 8.40E-04 |
| 23 | GO:0004332: fructose-bisphosphate aldolase activity | 8.40E-04 |
| 24 | GO:0030060: L-malate dehydrogenase activity | 9.99E-04 |
| 25 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.99E-04 |
| 26 | GO:0003735: structural constituent of ribosome | 1.47E-03 |
| 27 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.53E-03 |
| 28 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.54E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.65E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 2.36E-03 |
| 31 | GO:0008378: galactosyltransferase activity | 2.58E-03 |
| 32 | GO:0031072: heat shock protein binding | 2.82E-03 |
| 33 | GO:0031409: pigment binding | 3.56E-03 |
| 34 | GO:0030570: pectate lyase activity | 4.91E-03 |
| 35 | GO:0003727: single-stranded RNA binding | 5.20E-03 |
| 36 | GO:0050662: coenzyme binding | 6.42E-03 |
| 37 | GO:0008168: methyltransferase activity | 6.87E-03 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 7.27E-03 |
| 39 | GO:0016791: phosphatase activity | 8.08E-03 |
| 40 | GO:0005200: structural constituent of cytoskeleton | 8.42E-03 |
| 41 | GO:0008483: transaminase activity | 8.42E-03 |
| 42 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 8.42E-03 |
| 43 | GO:0016168: chlorophyll binding | 9.50E-03 |
| 44 | GO:0052689: carboxylic ester hydrolase activity | 9.78E-03 |
| 45 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.06E-02 |
| 46 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.38E-02 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 1.56E-02 |
| 48 | GO:0043621: protein self-association | 1.65E-02 |
| 49 | GO:0030599: pectinesterase activity | 2.37E-02 |
| 50 | GO:0051082: unfolded protein binding | 2.47E-02 |
| 51 | GO:0016746: transferase activity, transferring acyl groups | 2.52E-02 |
| 52 | GO:0016758: transferase activity, transferring hexosyl groups | 2.84E-02 |
| 53 | GO:0016740: transferase activity | 2.84E-02 |
| 54 | GO:0016829: lyase activity | 3.07E-02 |
| 55 | GO:0003743: translation initiation factor activity | 4.07E-02 |
| 56 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.32E-02 |
| 57 | GO:0005509: calcium ion binding | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.05E-26 |
| 3 | GO:0009941: chloroplast envelope | 1.05E-20 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.14E-16 |
| 5 | GO:0009570: chloroplast stroma | 2.23E-15 |
| 6 | GO:0009579: thylakoid | 1.78E-13 |
| 7 | GO:0009534: chloroplast thylakoid | 7.31E-08 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.53E-07 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.06E-06 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 4.94E-06 |
| 11 | GO:0048046: apoplast | 7.26E-06 |
| 12 | GO:0010287: plastoglobule | 2.44E-05 |
| 13 | GO:0010319: stromule | 2.98E-05 |
| 14 | GO:0016020: membrane | 4.44E-05 |
| 15 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.91E-05 |
| 16 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 6.91E-05 |
| 17 | GO:0005840: ribosome | 7.70E-05 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.66E-04 |
| 19 | GO:0009317: acetyl-CoA carboxylase complex | 2.81E-04 |
| 20 | GO:0009706: chloroplast inner membrane | 2.82E-04 |
| 21 | GO:0005960: glycine cleavage complex | 4.06E-04 |
| 22 | GO:0009522: photosystem I | 4.23E-04 |
| 23 | GO:0019898: extrinsic component of membrane | 4.53E-04 |
| 24 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 8.40E-04 |
| 25 | GO:0031977: thylakoid lumen | 1.32E-03 |
| 26 | GO:0005618: cell wall | 1.32E-03 |
| 27 | GO:0009539: photosystem II reaction center | 1.53E-03 |
| 28 | GO:0045298: tubulin complex | 1.73E-03 |
| 29 | GO:0030095: chloroplast photosystem II | 3.06E-03 |
| 30 | GO:0030076: light-harvesting complex | 3.30E-03 |
| 31 | GO:0042651: thylakoid membrane | 4.08E-03 |
| 32 | GO:0005777: peroxisome | 5.10E-03 |
| 33 | GO:0009523: photosystem II | 6.74E-03 |
| 34 | GO:0022626: cytosolic ribosome | 2.23E-02 |
| 35 | GO:0005615: extracellular space | 3.95E-02 |