GO Enrichment Analysis of Co-expressed Genes with
AT3G54920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 2 | GO:0033528: S-methylmethionine cycle | 0.00E+00 |
| 3 | GO:0009249: protein lipoylation | 0.00E+00 |
| 4 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 5 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 6 | GO:0051322: anaphase | 1.03E-05 |
| 7 | GO:0048564: photosystem I assembly | 6.41E-05 |
| 8 | GO:0048657: anther wall tapetum cell differentiation | 1.08E-04 |
| 9 | GO:0015798: myo-inositol transport | 1.08E-04 |
| 10 | GO:0043087: regulation of GTPase activity | 1.08E-04 |
| 11 | GO:0000066: mitochondrial ornithine transport | 1.08E-04 |
| 12 | GO:0006435: threonyl-tRNA aminoacylation | 2.52E-04 |
| 13 | GO:0043255: regulation of carbohydrate biosynthetic process | 2.52E-04 |
| 14 | GO:0080005: photosystem stoichiometry adjustment | 2.52E-04 |
| 15 | GO:0010207: photosystem II assembly | 2.55E-04 |
| 16 | GO:0009825: multidimensional cell growth | 2.87E-04 |
| 17 | GO:0001578: microtubule bundle formation | 4.19E-04 |
| 18 | GO:0006168: adenine salvage | 6.01E-04 |
| 19 | GO:0006166: purine ribonucleoside salvage | 6.01E-04 |
| 20 | GO:0010268: brassinosteroid homeostasis | 7.01E-04 |
| 21 | GO:0006183: GTP biosynthetic process | 7.98E-04 |
| 22 | GO:0006552: leucine catabolic process | 7.98E-04 |
| 23 | GO:0007020: microtubule nucleation | 7.98E-04 |
| 24 | GO:0015846: polyamine transport | 7.98E-04 |
| 25 | GO:0016132: brassinosteroid biosynthetic process | 8.59E-04 |
| 26 | GO:0009107: lipoate biosynthetic process | 1.01E-03 |
| 27 | GO:1902183: regulation of shoot apical meristem development | 1.01E-03 |
| 28 | GO:0044209: AMP salvage | 1.01E-03 |
| 29 | GO:0010158: abaxial cell fate specification | 1.01E-03 |
| 30 | GO:0046785: microtubule polymerization | 1.01E-03 |
| 31 | GO:0016125: sterol metabolic process | 1.03E-03 |
| 32 | GO:0000910: cytokinesis | 1.16E-03 |
| 33 | GO:0010337: regulation of salicylic acid metabolic process | 1.23E-03 |
| 34 | GO:0042549: photosystem II stabilization | 1.23E-03 |
| 35 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.23E-03 |
| 36 | GO:0022904: respiratory electron transport chain | 1.73E-03 |
| 37 | GO:0048528: post-embryonic root development | 1.73E-03 |
| 38 | GO:0009704: de-etiolation | 2.00E-03 |
| 39 | GO:0045010: actin nucleation | 2.00E-03 |
| 40 | GO:0007155: cell adhesion | 2.00E-03 |
| 41 | GO:0009658: chloroplast organization | 2.06E-03 |
| 42 | GO:0022900: electron transport chain | 2.28E-03 |
| 43 | GO:2000024: regulation of leaf development | 2.57E-03 |
| 44 | GO:0009821: alkaloid biosynthetic process | 2.57E-03 |
| 45 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.57E-03 |
| 46 | GO:0009086: methionine biosynthetic process | 2.88E-03 |
| 47 | GO:0046777: protein autophosphorylation | 2.95E-03 |
| 48 | GO:0006032: chitin catabolic process | 3.20E-03 |
| 49 | GO:0010215: cellulose microfibril organization | 3.20E-03 |
| 50 | GO:0045037: protein import into chloroplast stroma | 3.87E-03 |
| 51 | GO:0006094: gluconeogenesis | 4.23E-03 |
| 52 | GO:0009767: photosynthetic electron transport chain | 4.23E-03 |
| 53 | GO:0090351: seedling development | 4.96E-03 |
| 54 | GO:0010053: root epidermal cell differentiation | 4.96E-03 |
| 55 | GO:0010167: response to nitrate | 4.96E-03 |
| 56 | GO:0009793: embryo development ending in seed dormancy | 5.56E-03 |
| 57 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.75E-03 |
| 58 | GO:0009873: ethylene-activated signaling pathway | 6.13E-03 |
| 59 | GO:0010073: meristem maintenance | 6.15E-03 |
| 60 | GO:0006825: copper ion transport | 6.15E-03 |
| 61 | GO:0043622: cortical microtubule organization | 6.15E-03 |
| 62 | GO:0016998: cell wall macromolecule catabolic process | 6.56E-03 |
| 63 | GO:0048511: rhythmic process | 6.56E-03 |
| 64 | GO:0031348: negative regulation of defense response | 6.99E-03 |
| 65 | GO:0080092: regulation of pollen tube growth | 6.99E-03 |
| 66 | GO:0006730: one-carbon metabolic process | 6.99E-03 |
| 67 | GO:0016226: iron-sulfur cluster assembly | 6.99E-03 |
| 68 | GO:0010584: pollen exine formation | 7.87E-03 |
| 69 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 8.32E-03 |
| 70 | GO:0006508: proteolysis | 9.11E-03 |
| 71 | GO:0010197: polar nucleus fusion | 9.26E-03 |
| 72 | GO:0010154: fruit development | 9.26E-03 |
| 73 | GO:0007059: chromosome segregation | 9.74E-03 |
| 74 | GO:0009646: response to absence of light | 9.74E-03 |
| 75 | GO:0071554: cell wall organization or biogenesis | 1.07E-02 |
| 76 | GO:0007264: small GTPase mediated signal transduction | 1.12E-02 |
| 77 | GO:0010583: response to cyclopentenone | 1.12E-02 |
| 78 | GO:0016032: viral process | 1.12E-02 |
| 79 | GO:0071281: cellular response to iron ion | 1.18E-02 |
| 80 | GO:0010090: trichome morphogenesis | 1.18E-02 |
| 81 | GO:0009911: positive regulation of flower development | 1.39E-02 |
| 82 | GO:0010411: xyloglucan metabolic process | 1.56E-02 |
| 83 | GO:0016311: dephosphorylation | 1.62E-02 |
| 84 | GO:0030244: cellulose biosynthetic process | 1.68E-02 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 1.68E-02 |
| 86 | GO:0007568: aging | 1.86E-02 |
| 87 | GO:0009853: photorespiration | 1.99E-02 |
| 88 | GO:0045087: innate immune response | 1.99E-02 |
| 89 | GO:0006839: mitochondrial transport | 2.18E-02 |
| 90 | GO:0008283: cell proliferation | 2.38E-02 |
| 91 | GO:0042546: cell wall biogenesis | 2.45E-02 |
| 92 | GO:0009664: plant-type cell wall organization | 2.80E-02 |
| 93 | GO:0009809: lignin biosynthetic process | 2.94E-02 |
| 94 | GO:0006813: potassium ion transport | 2.94E-02 |
| 95 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.02E-02 |
| 96 | GO:0010224: response to UV-B | 3.02E-02 |
| 97 | GO:0006417: regulation of translation | 3.17E-02 |
| 98 | GO:0009058: biosynthetic process | 4.61E-02 |
| 99 | GO:0042744: hydrogen peroxide catabolic process | 4.86E-02 |
| 100 | GO:0009790: embryo development | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 2 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 3 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 4 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 5 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 6 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 7 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 8 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 9 | GO:0019808: polyamine binding | 0.00E+00 |
| 10 | GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity | 1.08E-04 |
| 11 | GO:0005290: L-histidine transmembrane transporter activity | 1.08E-04 |
| 12 | GO:0004008: copper-exporting ATPase activity | 1.08E-04 |
| 13 | GO:0004829: threonine-tRNA ligase activity | 2.52E-04 |
| 14 | GO:0005366: myo-inositol:proton symporter activity | 2.52E-04 |
| 15 | GO:0017118: lipoyltransferase activity | 2.52E-04 |
| 16 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.52E-04 |
| 17 | GO:0016415: octanoyltransferase activity | 2.52E-04 |
| 18 | GO:0003938: IMP dehydrogenase activity | 2.52E-04 |
| 19 | GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity | 2.52E-04 |
| 20 | GO:0000064: L-ornithine transmembrane transporter activity | 2.52E-04 |
| 21 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.19E-04 |
| 22 | GO:0016805: dipeptidase activity | 4.19E-04 |
| 23 | GO:0008430: selenium binding | 4.19E-04 |
| 24 | GO:0032947: protein complex scaffold | 4.19E-04 |
| 25 | GO:0015189: L-lysine transmembrane transporter activity | 6.01E-04 |
| 26 | GO:0015181: arginine transmembrane transporter activity | 6.01E-04 |
| 27 | GO:0003999: adenine phosphoribosyltransferase activity | 6.01E-04 |
| 28 | GO:0004518: nuclease activity | 9.14E-04 |
| 29 | GO:0009927: histidine phosphotransfer kinase activity | 1.47E-03 |
| 30 | GO:0005375: copper ion transmembrane transporter activity | 2.28E-03 |
| 31 | GO:0046872: metal ion binding | 2.62E-03 |
| 32 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.76E-03 |
| 33 | GO:0016844: strictosidine synthase activity | 2.88E-03 |
| 34 | GO:0004568: chitinase activity | 3.20E-03 |
| 35 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.53E-03 |
| 36 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.23E-03 |
| 37 | GO:0004190: aspartic-type endopeptidase activity | 4.96E-03 |
| 38 | GO:0005506: iron ion binding | 5.36E-03 |
| 39 | GO:0051536: iron-sulfur cluster binding | 5.75E-03 |
| 40 | GO:0008324: cation transmembrane transporter activity | 6.15E-03 |
| 41 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.24E-03 |
| 42 | GO:0008017: microtubule binding | 8.79E-03 |
| 43 | GO:0008080: N-acetyltransferase activity | 9.26E-03 |
| 44 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.07E-02 |
| 45 | GO:0048038: quinone binding | 1.07E-02 |
| 46 | GO:0008237: metallopeptidase activity | 1.28E-02 |
| 47 | GO:0016413: O-acetyltransferase activity | 1.34E-02 |
| 48 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.56E-02 |
| 49 | GO:0030247: polysaccharide binding | 1.56E-02 |
| 50 | GO:0004497: monooxygenase activity | 1.62E-02 |
| 51 | GO:0005096: GTPase activator activity | 1.74E-02 |
| 52 | GO:0052689: carboxylic ester hydrolase activity | 1.79E-02 |
| 53 | GO:0003993: acid phosphatase activity | 2.05E-02 |
| 54 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.18E-02 |
| 55 | GO:0004185: serine-type carboxypeptidase activity | 2.38E-02 |
| 56 | GO:0035091: phosphatidylinositol binding | 2.52E-02 |
| 57 | GO:0009055: electron carrier activity | 2.56E-02 |
| 58 | GO:0005198: structural molecule activity | 2.59E-02 |
| 59 | GO:0004672: protein kinase activity | 3.62E-02 |
| 60 | GO:0020037: heme binding | 3.96E-02 |
| 61 | GO:0004252: serine-type endopeptidase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017133: mitochondrial electron transfer flavoprotein complex | 0.00E+00 |
| 2 | GO:0009930: longitudinal side of cell surface | 0.00E+00 |
| 3 | GO:0042597: periplasmic space | 0.00E+00 |
| 4 | GO:0009574: preprophase band | 5.19E-06 |
| 5 | GO:0016328: lateral plasma membrane | 4.19E-04 |
| 6 | GO:0009897: external side of plasma membrane | 4.19E-04 |
| 7 | GO:0009507: chloroplast | 5.93E-04 |
| 8 | GO:0030660: Golgi-associated vesicle membrane | 7.98E-04 |
| 9 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 7.98E-04 |
| 10 | GO:0072686: mitotic spindle | 1.01E-03 |
| 11 | GO:0031209: SCAR complex | 1.23E-03 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 1.43E-03 |
| 13 | GO:0010005: cortical microtubule, transverse to long axis | 1.47E-03 |
| 14 | GO:0031305: integral component of mitochondrial inner membrane | 2.00E-03 |
| 15 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.00E-03 |
| 16 | GO:0005773: vacuole | 2.50E-03 |
| 17 | GO:0055028: cortical microtubule | 3.20E-03 |
| 18 | GO:0005740: mitochondrial envelope | 3.20E-03 |
| 19 | GO:0016324: apical plasma membrane | 3.20E-03 |
| 20 | GO:0005765: lysosomal membrane | 3.53E-03 |
| 21 | GO:0005938: cell cortex | 4.23E-03 |
| 22 | GO:0009524: phragmoplast | 6.41E-03 |
| 23 | GO:0009536: plastid | 7.48E-03 |
| 24 | GO:0005874: microtubule | 1.56E-02 |
| 25 | GO:0031225: anchored component of membrane | 1.62E-02 |
| 26 | GO:0019005: SCF ubiquitin ligase complex | 1.68E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 1.68E-02 |
| 28 | GO:0005819: spindle | 2.12E-02 |
| 29 | GO:0005856: cytoskeleton | 2.59E-02 |
| 30 | GO:0009505: plant-type cell wall | 2.98E-02 |
| 31 | GO:0010008: endosome membrane | 3.39E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 3.78E-02 |
| 33 | GO:0005623: cell | 4.52E-02 |