GO Enrichment Analysis of Co-expressed Genes with
AT3G54890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 6.70E-18 |
| 3 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.78E-10 |
| 4 | GO:0018298: protein-chromophore linkage | 1.16E-08 |
| 5 | GO:0010196: nonphotochemical quenching | 1.62E-06 |
| 6 | GO:0019684: photosynthesis, light reaction | 6.90E-06 |
| 7 | GO:0010218: response to far red light | 1.18E-04 |
| 8 | GO:0009631: cold acclimation | 1.24E-04 |
| 9 | GO:0009637: response to blue light | 1.37E-04 |
| 10 | GO:0010114: response to red light | 1.81E-04 |
| 11 | GO:0009645: response to low light intensity stimulus | 2.99E-04 |
| 12 | GO:0010205: photoinhibition | 4.96E-04 |
| 13 | GO:0010150: leaf senescence | 5.99E-04 |
| 14 | GO:0072593: reactive oxygen species metabolic process | 6.03E-04 |
| 15 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.03E-04 |
| 16 | GO:0015706: nitrate transport | 6.58E-04 |
| 17 | GO:0010207: photosystem II assembly | 7.72E-04 |
| 18 | GO:0042631: cellular response to water deprivation | 1.41E-03 |
| 19 | GO:0006814: sodium ion transport | 1.56E-03 |
| 20 | GO:0055072: iron ion homeostasis | 1.63E-03 |
| 21 | GO:0009737: response to abscisic acid | 1.83E-03 |
| 22 | GO:0042128: nitrate assimilation | 2.35E-03 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 2.43E-03 |
| 24 | GO:0009735: response to cytokinin | 2.59E-03 |
| 25 | GO:0009416: response to light stimulus | 2.82E-03 |
| 26 | GO:0055085: transmembrane transport | 3.58E-03 |
| 27 | GO:0009644: response to high light intensity | 3.82E-03 |
| 28 | GO:0009740: gibberellic acid mediated signaling pathway | 5.43E-03 |
| 29 | GO:0009624: response to nematode | 5.66E-03 |
| 30 | GO:0042742: defense response to bacterium | 5.68E-03 |
| 31 | GO:0009409: response to cold | 7.68E-03 |
| 32 | GO:0009739: response to gibberellin | 8.93E-03 |
| 33 | GO:0009658: chloroplast organization | 1.12E-02 |
| 34 | GO:0045454: cell redox homeostasis | 1.48E-02 |
| 35 | GO:0016042: lipid catabolic process | 1.69E-02 |
| 36 | GO:0009751: response to salicylic acid | 1.70E-02 |
| 37 | GO:0008152: metabolic process | 1.85E-02 |
| 38 | GO:0006457: protein folding | 3.11E-02 |
| 39 | GO:0006979: response to oxidative stress | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0031409: pigment binding | 2.30E-10 |
| 4 | GO:0016168: chlorophyll binding | 7.10E-09 |
| 5 | GO:0005534: galactose binding | 1.30E-05 |
| 6 | GO:0015112: nitrate transmembrane transporter activity | 4.96E-04 |
| 7 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.14E-04 |
| 8 | GO:0008266: poly(U) RNA binding | 7.72E-04 |
| 9 | GO:0008514: organic anion transmembrane transporter activity | 1.27E-03 |
| 10 | GO:0046872: metal ion binding | 1.33E-03 |
| 11 | GO:0030145: manganese ion binding | 2.87E-03 |
| 12 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.82E-03 |
| 13 | GO:0015293: symporter activity | 3.93E-03 |
| 14 | GO:0005509: calcium ion binding | 5.24E-03 |
| 15 | GO:0015144: carbohydrate transmembrane transporter activity | 7.48E-03 |
| 16 | GO:0005351: sugar:proton symporter activity | 8.13E-03 |
| 17 | GO:0016788: hydrolase activity, acting on ester bonds | 1.14E-02 |
| 18 | GO:0016787: hydrolase activity | 1.22E-02 |
| 19 | GO:0052689: carboxylic ester hydrolase activity | 1.40E-02 |
| 20 | GO:0008289: lipid binding | 2.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 5.53E-20 |
| 4 | GO:0009534: chloroplast thylakoid | 1.11E-19 |
| 5 | GO:0009579: thylakoid | 1.21E-17 |
| 6 | GO:0010287: plastoglobule | 8.09E-16 |
| 7 | GO:0009507: chloroplast | 1.27E-13 |
| 8 | GO:0009941: chloroplast envelope | 1.08E-12 |
| 9 | GO:0009538: photosystem I reaction center | 5.38E-12 |
| 10 | GO:0009522: photosystem I | 1.87E-09 |
| 11 | GO:0030095: chloroplast photosystem II | 4.96E-08 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.62E-06 |
| 13 | GO:0009570: chloroplast stroma | 2.18E-06 |
| 14 | GO:0009782: photosystem I antenna complex | 1.30E-05 |
| 15 | GO:0030076: light-harvesting complex | 1.32E-05 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 1.96E-05 |
| 17 | GO:0009523: photosystem II | 4.75E-05 |
| 18 | GO:0019898: extrinsic component of membrane | 4.75E-05 |
| 19 | GO:0009517: PSII associated light-harvesting complex II | 1.30E-04 |
| 20 | GO:0031977: thylakoid lumen | 1.66E-04 |
| 21 | GO:0016020: membrane | 1.73E-04 |
| 22 | GO:0016021: integral component of membrane | 1.95E-04 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 4.38E-04 |
| 24 | GO:0042651: thylakoid membrane | 1.01E-03 |
| 25 | GO:0009706: chloroplast inner membrane | 5.66E-03 |
| 26 | GO:0009705: plant-type vacuole membrane | 8.26E-03 |
| 27 | GO:0031969: chloroplast membrane | 1.31E-02 |
| 28 | GO:0048046: apoplast | 2.07E-02 |