Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54720

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
3GO:0001778: plasma membrane repair0.00E+00
4GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
5GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
6GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
7GO:0042407: cristae formation0.00E+00
8GO:0007638: mechanosensory behavior0.00E+00
9GO:0070125: mitochondrial translational elongation0.00E+00
10GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
11GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
12GO:0006573: valine metabolic process0.00E+00
13GO:0045184: establishment of protein localization0.00E+00
14GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
15GO:0017038: protein import0.00E+00
16GO:0006429: leucyl-tRNA aminoacylation0.00E+00
17GO:0070979: protein K11-linked ubiquitination0.00E+00
18GO:0018023: peptidyl-lysine trimethylation0.00E+00
19GO:0042352: GDP-L-fucose salvage0.00E+00
20GO:1905421: regulation of plant organ morphogenesis0.00E+00
21GO:1903224: regulation of endodermal cell differentiation0.00E+00
22GO:0061157: mRNA destabilization0.00E+00
23GO:0010081: regulation of inflorescence meristem growth0.00E+00
24GO:0030155: regulation of cell adhesion0.00E+00
25GO:1905177: tracheary element differentiation0.00E+00
26GO:0019323: pentose catabolic process0.00E+00
27GO:0090706: specification of plant organ position0.00E+00
28GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
29GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
30GO:0008298: intracellular mRNA localization0.00E+00
31GO:0090071: negative regulation of ribosome biogenesis0.00E+00
32GO:0009658: chloroplast organization2.91E-09
33GO:0015995: chlorophyll biosynthetic process7.42E-06
34GO:0046620: regulation of organ growth9.00E-06
35GO:0045038: protein import into chloroplast thylakoid membrane3.54E-05
36GO:1902326: positive regulation of chlorophyll biosynthetic process5.69E-05
37GO:1900871: chloroplast mRNA modification5.69E-05
38GO:0018026: peptidyl-lysine monomethylation5.69E-05
39GO:1901259: chloroplast rRNA processing1.01E-04
40GO:0010020: chloroplast fission1.30E-04
41GO:0009793: embryo development ending in seed dormancy2.12E-04
42GO:0071482: cellular response to light stimulus2.81E-04
43GO:0046739: transport of virus in multicellular host3.38E-04
44GO:0010239: chloroplast mRNA processing3.38E-04
45GO:2001141: regulation of RNA biosynthetic process3.38E-04
46GO:0010027: thylakoid membrane organization3.43E-04
47GO:0009734: auxin-activated signaling pathway4.20E-04
48GO:1900865: chloroplast RNA modification4.59E-04
49GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.05E-04
50GO:0010182: sugar mediated signaling pathway7.35E-04
51GO:0009733: response to auxin7.97E-04
52GO:0080110: sporopollenin biosynthetic process8.10E-04
53GO:0016123: xanthophyll biosynthetic process8.10E-04
54GO:0009416: response to light stimulus8.54E-04
55GO:0040008: regulation of growth9.22E-04
56GO:0010588: cotyledon vascular tissue pattern formation9.71E-04
57GO:0009451: RNA modification1.07E-03
58GO:0016554: cytidine to uridine editing1.12E-03
59GO:0042793: transcription from plastid promoter1.12E-03
60GO:0009959: negative gravitropism1.12E-03
61GO:0043686: co-translational protein modification1.20E-03
62GO:2000021: regulation of ion homeostasis1.20E-03
63GO:0035987: endodermal cell differentiation1.20E-03
64GO:0005980: glycogen catabolic process1.20E-03
65GO:0030198: extracellular matrix organization1.20E-03
66GO:0006438: valyl-tRNA aminoacylation1.20E-03
67GO:0090558: plant epidermis development1.20E-03
68GO:0043007: maintenance of rDNA1.20E-03
69GO:0051247: positive regulation of protein metabolic process1.20E-03
70GO:1902458: positive regulation of stomatal opening1.20E-03
71GO:0015904: tetracycline transport1.20E-03
72GO:2000905: negative regulation of starch metabolic process1.20E-03
73GO:0009090: homoserine biosynthetic process1.20E-03
74GO:0070509: calcium ion import1.20E-03
75GO:0005991: trehalose metabolic process1.20E-03
76GO:0048363: mucilage pectin metabolic process1.20E-03
77GO:0010450: inflorescence meristem growth1.20E-03
78GO:0044262: cellular carbohydrate metabolic process1.20E-03
79GO:0006419: alanyl-tRNA aminoacylation1.20E-03
80GO:1904966: positive regulation of vitamin E biosynthetic process1.20E-03
81GO:0043266: regulation of potassium ion transport1.20E-03
82GO:0010442: guard cell morphogenesis1.20E-03
83GO:0010063: positive regulation of trichoblast fate specification1.20E-03
84GO:0010480: microsporocyte differentiation1.20E-03
85GO:0010080: regulation of floral meristem growth1.20E-03
86GO:0042659: regulation of cell fate specification1.20E-03
87GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process1.20E-03
88GO:0000025: maltose catabolic process1.20E-03
89GO:1904964: positive regulation of phytol biosynthetic process1.20E-03
90GO:0042759: long-chain fatty acid biosynthetic process1.20E-03
91GO:0006551: leucine metabolic process1.20E-03
92GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.20E-03
93GO:0042371: vitamin K biosynthetic process1.20E-03
94GO:0042372: phylloquinone biosynthetic process1.47E-03
95GO:0009082: branched-chain amino acid biosynthetic process1.47E-03
96GO:0009099: valine biosynthetic process1.47E-03
97GO:0030488: tRNA methylation1.47E-03
98GO:0048437: floral organ development1.89E-03
99GO:0070413: trehalose metabolism in response to stress2.37E-03
100GO:2000070: regulation of response to water deprivation2.37E-03
101GO:0080009: mRNA methylation2.66E-03
102GO:0009786: regulation of asymmetric cell division2.66E-03
103GO:0060359: response to ammonium ion2.66E-03
104GO:0048255: mRNA stabilization2.66E-03
105GO:0046740: transport of virus in host, cell to cell2.66E-03
106GO:0031648: protein destabilization2.66E-03
107GO:0001682: tRNA 5'-leader removal2.66E-03
108GO:1903426: regulation of reactive oxygen species biosynthetic process2.66E-03
109GO:0006568: tryptophan metabolic process2.66E-03
110GO:0006423: cysteinyl-tRNA aminoacylation2.66E-03
111GO:2000123: positive regulation of stomatal complex development2.66E-03
112GO:0010024: phytochromobilin biosynthetic process2.66E-03
113GO:0010275: NAD(P)H dehydrogenase complex assembly2.66E-03
114GO:0006432: phenylalanyl-tRNA aminoacylation2.66E-03
115GO:0052541: plant-type cell wall cellulose metabolic process2.66E-03
116GO:0071668: plant-type cell wall assembly2.66E-03
117GO:1904143: positive regulation of carotenoid biosynthetic process2.66E-03
118GO:0010497: plasmodesmata-mediated intercellular transport2.90E-03
119GO:0009657: plastid organization2.90E-03
120GO:0009097: isoleucine biosynthetic process2.90E-03
121GO:0016117: carotenoid biosynthetic process3.50E-03
122GO:0010087: phloem or xylem histogenesis3.87E-03
123GO:0008033: tRNA processing3.87E-03
124GO:0031425: chloroplast RNA processing4.16E-03
125GO:0006779: porphyrin-containing compound biosynthetic process4.16E-03
126GO:0009098: leucine biosynthetic process4.16E-03
127GO:0009958: positive gravitropism4.27E-03
128GO:0006662: glycerol ether metabolic process4.27E-03
129GO:0043157: response to cation stress4.43E-03
130GO:0072661: protein targeting to plasma membrane4.43E-03
131GO:0005977: glycogen metabolic process4.43E-03
132GO:0045165: cell fate commitment4.43E-03
133GO:0006788: heme oxidation4.43E-03
134GO:0010022: meristem determinacy4.43E-03
135GO:0048586: regulation of long-day photoperiodism, flowering4.43E-03
136GO:0006954: inflammatory response4.43E-03
137GO:0045910: negative regulation of DNA recombination4.43E-03
138GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition4.43E-03
139GO:0031145: anaphase-promoting complex-dependent catabolic process4.43E-03
140GO:0010623: programmed cell death involved in cell development4.43E-03
141GO:0033591: response to L-ascorbic acid4.43E-03
142GO:0048281: inflorescence morphogenesis4.43E-03
143GO:0090708: specification of plant organ axis polarity4.43E-03
144GO:0006696: ergosterol biosynthetic process4.43E-03
145GO:0090153: regulation of sphingolipid biosynthetic process4.43E-03
146GO:0048829: root cap development4.87E-03
147GO:0006782: protoporphyrinogen IX biosynthetic process4.87E-03
148GO:0009742: brassinosteroid mediated signaling pathway4.87E-03
149GO:0009773: photosynthetic electron transport in photosystem I5.66E-03
150GO:0019684: photosynthesis, light reaction5.66E-03
151GO:0009089: lysine biosynthetic process via diaminopimelate5.66E-03
152GO:0006352: DNA-templated transcription, initiation5.66E-03
153GO:0009926: auxin polar transport5.87E-03
154GO:0032502: developmental process6.12E-03
155GO:0090308: regulation of methylation-dependent chromatin silencing6.48E-03
156GO:0019048: modulation by virus of host morphology or physiology6.48E-03
157GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity6.48E-03
158GO:0009067: aspartate family amino acid biosynthetic process6.48E-03
159GO:0031048: chromatin silencing by small RNA6.48E-03
160GO:0010148: transpiration6.48E-03
161GO:0009052: pentose-phosphate shunt, non-oxidative branch6.48E-03
162GO:0009647: skotomorphogenesis6.48E-03
163GO:0010306: rhamnogalacturonan II biosynthetic process6.48E-03
164GO:1990019: protein storage vacuole organization6.48E-03
165GO:0010071: root meristem specification6.48E-03
166GO:0051513: regulation of monopolar cell growth6.48E-03
167GO:0006612: protein targeting to membrane6.48E-03
168GO:0007231: osmosensory signaling pathway6.48E-03
169GO:0016556: mRNA modification6.48E-03
170GO:0009102: biotin biosynthetic process6.48E-03
171GO:0030071: regulation of mitotic metaphase/anaphase transition6.48E-03
172GO:0051639: actin filament network formation6.48E-03
173GO:0032456: endocytic recycling6.48E-03
174GO:0043572: plastid fission6.48E-03
175GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis6.48E-03
176GO:0005983: starch catabolic process6.50E-03
177GO:2000012: regulation of auxin polar transport7.41E-03
178GO:0010207: photosystem II assembly8.39E-03
179GO:0022622: root system development8.80E-03
180GO:0006221: pyrimidine nucleotide biosynthetic process8.80E-03
181GO:0009755: hormone-mediated signaling pathway8.80E-03
182GO:0051567: histone H3-K9 methylation8.80E-03
183GO:0010508: positive regulation of autophagy8.80E-03
184GO:0010109: regulation of photosynthesis8.80E-03
185GO:0030104: water homeostasis8.80E-03
186GO:0008295: spermidine biosynthetic process8.80E-03
187GO:0033500: carbohydrate homeostasis8.80E-03
188GO:2000038: regulation of stomatal complex development8.80E-03
189GO:0051764: actin crosslink formation8.80E-03
190GO:0042274: ribosomal small subunit biogenesis8.80E-03
191GO:0006661: phosphatidylinositol biosynthetic process8.80E-03
192GO:0009765: photosynthesis, light harvesting8.80E-03
193GO:2000306: positive regulation of photomorphogenesis8.80E-03
194GO:0010021: amylopectin biosynthetic process8.80E-03
195GO:0070588: calcium ion transmembrane transport9.44E-03
196GO:0005975: carbohydrate metabolic process1.05E-02
197GO:0006071: glycerol metabolic process1.06E-02
198GO:0031365: N-terminal protein amino acid modification1.14E-02
199GO:0000304: response to singlet oxygen1.14E-02
200GO:0016120: carotene biosynthetic process1.14E-02
201GO:1902183: regulation of shoot apical meristem development1.14E-02
202GO:0032543: mitochondrial translation1.14E-02
203GO:0010438: cellular response to sulfur starvation1.14E-02
204GO:0010158: abaxial cell fate specification1.14E-02
205GO:0010236: plastoquinone biosynthetic process1.14E-02
206GO:0032876: negative regulation of DNA endoreduplication1.14E-02
207GO:0010375: stomatal complex patterning1.14E-02
208GO:0048497: maintenance of floral organ identity1.14E-02
209GO:0005992: trehalose biosynthetic process1.17E-02
210GO:0009944: polarity specification of adaxial/abaxial axis1.17E-02
211GO:0051017: actin filament bundle assembly1.17E-02
212GO:0048367: shoot system development1.26E-02
213GO:0006418: tRNA aminoacylation for protein translation1.30E-02
214GO:0051302: regulation of cell division1.30E-02
215GO:0055114: oxidation-reduction process1.31E-02
216GO:0010405: arabinogalactan protein metabolic process1.42E-02
217GO:0009913: epidermal cell differentiation1.42E-02
218GO:0006655: phosphatidylglycerol biosynthetic process1.42E-02
219GO:0032973: amino acid export1.42E-02
220GO:0018258: protein O-linked glycosylation via hydroxyproline1.42E-02
221GO:1902456: regulation of stomatal opening1.42E-02
222GO:0000741: karyogamy1.42E-02
223GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.42E-02
224GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.42E-02
225GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.42E-02
226GO:0033365: protein localization to organelle1.42E-02
227GO:0016458: gene silencing1.42E-02
228GO:0006730: one-carbon metabolic process1.57E-02
229GO:0015979: photosynthesis1.64E-02
230GO:0009088: threonine biosynthetic process1.72E-02
231GO:0042026: protein refolding1.72E-02
232GO:0009686: gibberellin biosynthetic process1.72E-02
233GO:0080086: stamen filament development1.72E-02
234GO:2000033: regulation of seed dormancy process1.72E-02
235GO:0009648: photoperiodism1.72E-02
236GO:0031930: mitochondria-nucleus signaling pathway1.72E-02
237GO:0009612: response to mechanical stimulus1.72E-02
238GO:2000067: regulation of root morphogenesis1.72E-02
239GO:0006458: 'de novo' protein folding1.72E-02
240GO:0017148: negative regulation of translation1.72E-02
241GO:0048280: vesicle fusion with Golgi apparatus1.72E-02
242GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.72E-02
243GO:0045454: cell redox homeostasis1.79E-02
244GO:0034599: cellular response to oxidative stress1.84E-02
245GO:0010584: pollen exine formation1.87E-02
246GO:0015693: magnesium ion transport2.04E-02
247GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.04E-02
248GO:0010103: stomatal complex morphogenesis2.04E-02
249GO:0032880: regulation of protein localization2.04E-02
250GO:0010161: red light signaling pathway2.04E-02
251GO:0070370: cellular heat acclimation2.04E-02
252GO:0010098: suspensor development2.04E-02
253GO:0006955: immune response2.04E-02
254GO:0048528: post-embryonic root development2.04E-02
255GO:0010444: guard mother cell differentiation2.04E-02
256GO:0009772: photosynthetic electron transport in photosystem II2.04E-02
257GO:0043090: amino acid import2.04E-02
258GO:0006400: tRNA modification2.04E-02
259GO:0030307: positive regulation of cell growth2.04E-02
260GO:0030497: fatty acid elongation2.04E-02
261GO:0010118: stomatal movement2.20E-02
262GO:0080022: primary root development2.20E-02
263GO:0007275: multicellular organism development2.23E-02
264GO:0048868: pollen tube development2.37E-02
265GO:0010305: leaf vascular tissue pattern formation2.37E-02
266GO:0010197: polar nucleus fusion2.37E-02
267GO:0055075: potassium ion homeostasis2.39E-02
268GO:0009819: drought recovery2.39E-02
269GO:0000105: histidine biosynthetic process2.39E-02
270GO:0009231: riboflavin biosynthetic process2.39E-02
271GO:0042255: ribosome assembly2.39E-02
272GO:0010439: regulation of glucosinolate biosynthetic process2.39E-02
273GO:0001522: pseudouridine synthesis2.39E-02
274GO:0006353: DNA-templated transcription, termination2.39E-02
275GO:0006605: protein targeting2.39E-02
276GO:0007155: cell adhesion2.39E-02
277GO:0048564: photosystem I assembly2.39E-02
278GO:0010078: maintenance of root meristem identity2.39E-02
279GO:0032875: regulation of DNA endoreduplication2.39E-02
280GO:0009646: response to absence of light2.55E-02
281GO:0048825: cotyledon development2.74E-02
282GO:0007186: G-protein coupled receptor signaling pathway2.75E-02
283GO:0043562: cellular response to nitrogen levels2.75E-02
284GO:0001558: regulation of cell growth2.75E-02
285GO:0010093: specification of floral organ identity2.75E-02
286GO:0010099: regulation of photomorphogenesis2.75E-02
287GO:0010100: negative regulation of photomorphogenesis2.75E-02
288GO:0015996: chlorophyll catabolic process2.75E-02
289GO:0032544: plastid translation2.75E-02
290GO:0009790: embryo development2.82E-02
291GO:0000902: cell morphogenesis3.13E-02
292GO:0051865: protein autoubiquitination3.13E-02
293GO:0010583: response to cyclopentenone3.13E-02
294GO:0080144: amino acid homeostasis3.13E-02
295GO:0016032: viral process3.13E-02
296GO:2000024: regulation of leaf development3.13E-02
297GO:0046916: cellular transition metal ion homeostasis3.13E-02
298GO:0046685: response to arsenic-containing substance3.13E-02
299GO:0006783: heme biosynthetic process3.13E-02
300GO:0000373: Group II intron splicing3.13E-02
301GO:0009664: plant-type cell wall organization3.19E-02
302GO:0048366: leaf development3.22E-02
303GO:1901657: glycosyl compound metabolic process3.34E-02
304GO:0009086: methionine biosynthetic process3.53E-02
305GO:0048354: mucilage biosynthetic process involved in seed coat development3.53E-02
306GO:2000280: regulation of root development3.53E-02
307GO:0009638: phototropism3.53E-02
308GO:0043067: regulation of programmed cell death3.53E-02
309GO:0009828: plant-type cell wall loosening3.56E-02
310GO:0006896: Golgi to vacuole transport3.94E-02
311GO:0045036: protein targeting to chloroplast3.94E-02
312GO:0009641: shade avoidance3.94E-02
313GO:0006298: mismatch repair3.94E-02
314GO:0009299: mRNA transcription3.94E-02
315GO:0006949: syncytium formation3.94E-02
316GO:0010162: seed dormancy process3.94E-02
317GO:0030422: production of siRNA involved in RNA interference3.94E-02
318GO:0009909: regulation of flower development3.95E-02
319GO:0051607: defense response to virus4.00E-02
320GO:0007166: cell surface receptor signaling pathway4.37E-02
321GO:0009682: induced systemic resistance4.37E-02
322GO:0010216: maintenance of DNA methylation4.37E-02
323GO:0009684: indoleacetic acid biosynthetic process4.37E-02
324GO:0006415: translational termination4.37E-02
325GO:0009073: aromatic amino acid family biosynthetic process4.37E-02
326GO:0043085: positive regulation of catalytic activity4.37E-02
327GO:0006816: calcium ion transport4.37E-02
328GO:0048229: gametophyte development4.37E-02
329GO:0010029: regulation of seed germination4.48E-02
330GO:0016024: CDP-diacylglycerol biosynthetic process4.81E-02
331GO:0045037: protein import into chloroplast stroma4.81E-02
332GO:0010582: floral meristem determinacy4.81E-02
333GO:0010105: negative regulation of ethylene-activated signaling pathway4.81E-02
334GO:0009740: gibberellic acid mediated signaling pathway5.00E-02
RankGO TermAdjusted P value
1GO:0050201: fucokinase activity0.00E+00
2GO:0015267: channel activity0.00E+00
3GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
4GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
5GO:0019144: ADP-sugar diphosphatase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0071633: dihydroceramidase activity0.00E+00
8GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity0.00E+00
9GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
10GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
11GO:0005048: signal sequence binding0.00E+00
12GO:0005201: extracellular matrix structural constituent0.00E+00
13GO:0046905: phytoene synthase activity0.00E+00
14GO:0050613: delta14-sterol reductase activity0.00E+00
15GO:0047341: fucose-1-phosphate guanylyltransferase activity0.00E+00
16GO:0004076: biotin synthase activity0.00E+00
17GO:0004823: leucine-tRNA ligase activity0.00E+00
18GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
19GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity0.00E+00
20GO:0010349: L-galactose dehydrogenase activity0.00E+00
21GO:0003723: RNA binding2.64E-05
22GO:0004148: dihydrolipoyl dehydrogenase activity1.72E-04
23GO:0001872: (1->3)-beta-D-glucan binding3.38E-04
24GO:0016279: protein-lysine N-methyltransferase activity5.51E-04
25GO:0019199: transmembrane receptor protein kinase activity5.51E-04
26GO:0001053: plastid sigma factor activity5.51E-04
27GO:0016987: sigma factor activity5.51E-04
28GO:0004519: endonuclease activity5.64E-04
29GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.20E-03
30GO:0080042: ADP-glucose pyrophosphohydrolase activity1.20E-03
31GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity1.20E-03
32GO:0050308: sugar-phosphatase activity1.20E-03
33GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity1.20E-03
34GO:0004813: alanine-tRNA ligase activity1.20E-03
35GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity1.20E-03
36GO:0051777: ent-kaurenoate oxidase activity1.20E-03
37GO:0004856: xylulokinase activity1.20E-03
38GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.20E-03
39GO:0042586: peptide deformylase activity1.20E-03
40GO:0052381: tRNA dimethylallyltransferase activity1.20E-03
41GO:0004134: 4-alpha-glucanotransferase activity1.20E-03
42GO:0051996: squalene synthase activity1.20E-03
43GO:0010313: phytochrome binding1.20E-03
44GO:0004645: phosphorylase activity1.20E-03
45GO:0050139: nicotinate-N-glucosyltransferase activity1.20E-03
46GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.20E-03
47GO:0019203: carbohydrate phosphatase activity1.20E-03
48GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.20E-03
49GO:0003984: acetolactate synthase activity1.20E-03
50GO:0005227: calcium activated cation channel activity1.20E-03
51GO:0004425: indole-3-glycerol-phosphate synthase activity1.20E-03
52GO:0008158: hedgehog receptor activity1.20E-03
53GO:0005080: protein kinase C binding1.20E-03
54GO:0016776: phosphotransferase activity, phosphate group as acceptor1.20E-03
55GO:0004832: valine-tRNA ligase activity1.20E-03
56GO:0008184: glycogen phosphorylase activity1.20E-03
57GO:0042834: peptidoglycan binding1.20E-03
58GO:0016597: amino acid binding1.65E-03
59GO:0005528: FK506 binding1.74E-03
60GO:0004176: ATP-dependent peptidase activity2.24E-03
61GO:0017118: lipoyltransferase activity2.66E-03
62GO:0008805: carbon-monoxide oxygenase activity2.66E-03
63GO:0008493: tetracycline transporter activity2.66E-03
64GO:0003852: 2-isopropylmalate synthase activity2.66E-03
65GO:0004826: phenylalanine-tRNA ligase activity2.66E-03
66GO:0004412: homoserine dehydrogenase activity2.66E-03
67GO:0080041: ADP-ribose pyrophosphohydrolase activity2.66E-03
68GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity2.66E-03
69GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.66E-03
70GO:0043425: bHLH transcription factor binding2.66E-03
71GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity2.66E-03
72GO:0080097: L-tryptophan:pyruvate aminotransferase activity2.66E-03
73GO:1901981: phosphatidylinositol phosphate binding2.66E-03
74GO:0016630: protochlorophyllide reductase activity2.66E-03
75GO:0019156: isoamylase activity2.66E-03
76GO:0004766: spermidine synthase activity2.66E-03
77GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.66E-03
78GO:0004817: cysteine-tRNA ligase activity2.66E-03
79GO:0004310: farnesyl-diphosphate farnesyltransferase activity2.66E-03
80GO:0004750: ribulose-phosphate 3-epimerase activity2.66E-03
81GO:0003727: single-stranded RNA binding3.15E-03
82GO:0004222: metalloendopeptidase activity3.19E-03
83GO:0008889: glycerophosphodiester phosphodiesterase activity3.50E-03
84GO:0047134: protein-disulfide reductase activity3.50E-03
85GO:0003913: DNA photolyase activity4.43E-03
86GO:0070402: NADPH binding4.43E-03
87GO:0002161: aminoacyl-tRNA editing activity4.43E-03
88GO:0005504: fatty acid binding4.43E-03
89GO:0015462: ATPase-coupled protein transmembrane transporter activity4.43E-03
90GO:0004791: thioredoxin-disulfide reductase activity4.69E-03
91GO:0043023: ribosomal large subunit binding6.48E-03
92GO:0052654: L-leucine transaminase activity6.48E-03
93GO:0009041: uridylate kinase activity6.48E-03
94GO:0035197: siRNA binding6.48E-03
95GO:0052655: L-valine transaminase activity6.48E-03
96GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.48E-03
97GO:0016851: magnesium chelatase activity6.48E-03
98GO:0016149: translation release factor activity, codon specific6.48E-03
99GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity6.48E-03
100GO:0004072: aspartate kinase activity6.48E-03
101GO:0052656: L-isoleucine transaminase activity6.48E-03
102GO:0000049: tRNA binding6.50E-03
103GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.65E-03
104GO:0016491: oxidoreductase activity6.86E-03
105GO:0031072: heat shock protein binding7.41E-03
106GO:0005262: calcium channel activity7.41E-03
107GO:0009982: pseudouridine synthase activity7.41E-03
108GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.45E-03
109GO:0008237: metallopeptidase activity7.80E-03
110GO:0008266: poly(U) RNA binding8.39E-03
111GO:0042973: glucan endo-1,3-beta-D-glucosidase activity8.39E-03
112GO:0005525: GTP binding8.69E-03
113GO:0004335: galactokinase activity8.80E-03
114GO:0004659: prenyltransferase activity8.80E-03
115GO:0004084: branched-chain-amino-acid transaminase activity8.80E-03
116GO:0043495: protein anchor8.80E-03
117GO:0045430: chalcone isomerase activity8.80E-03
118GO:0005319: lipid transporter activity8.80E-03
119GO:0042277: peptide binding8.80E-03
120GO:0004392: heme oxygenase (decyclizing) activity8.80E-03
121GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity8.80E-03
122GO:0003924: GTPase activity1.01E-02
123GO:0016773: phosphotransferase activity, alcohol group as acceptor1.14E-02
124GO:0016846: carbon-sulfur lyase activity1.14E-02
125GO:2001070: starch binding1.42E-02
126GO:0030983: mismatched DNA binding1.42E-02
127GO:0004556: alpha-amylase activity1.42E-02
128GO:0016208: AMP binding1.42E-02
129GO:1990714: hydroxyproline O-galactosyltransferase activity1.42E-02
130GO:0004462: lactoylglutathione lyase activity1.42E-02
131GO:0004526: ribonuclease P activity1.42E-02
132GO:0004709: MAP kinase kinase kinase activity1.42E-02
133GO:0015035: protein disulfide oxidoreductase activity1.67E-02
134GO:0016832: aldehyde-lyase activity1.72E-02
135GO:0008195: phosphatidate phosphatase activity1.72E-02
136GO:0004656: procollagen-proline 4-dioxygenase activity1.72E-02
137GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.72E-02
138GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.72E-02
139GO:0042802: identical protein binding1.75E-02
140GO:0003993: acid phosphatase activity1.84E-02
141GO:0004812: aminoacyl-tRNA ligase activity2.03E-02
142GO:0019899: enzyme binding2.04E-02
143GO:0001085: RNA polymerase II transcription factor binding2.37E-02
144GO:0004033: aldo-keto reductase (NADP) activity2.39E-02
145GO:0008312: 7S RNA binding2.39E-02
146GO:0050662: coenzyme binding2.55E-02
147GO:0043621: protein self-association2.64E-02
148GO:0046914: transition metal ion binding2.75E-02
149GO:0008173: RNA methyltransferase activity2.75E-02
150GO:0003747: translation release factor activity3.13E-02
151GO:0005524: ATP binding3.13E-02
152GO:0008138: protein tyrosine/serine/threonine phosphatase activity3.13E-02
153GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.25E-02
154GO:0051015: actin filament binding3.34E-02
155GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.48E-02
156GO:0016791: phosphatase activity3.56E-02
157GO:0003690: double-stranded DNA binding3.64E-02
158GO:0005200: structural constituent of cytoskeleton3.78E-02
159GO:0008047: enzyme activator activity3.94E-02
160GO:0015020: glucuronosyltransferase activity3.94E-02
161GO:0004805: trehalose-phosphatase activity3.94E-02
162GO:0015171: amino acid transmembrane transporter activity3.95E-02
163GO:0052689: carboxylic ester hydrolase activity4.14E-02
164GO:0008559: xenobiotic-transporting ATPase activity4.37E-02
165GO:0044183: protein binding involved in protein folding4.37E-02
166GO:0005089: Rho guanyl-nucleotide exchange factor activity4.37E-02
167GO:0004650: polygalacturonase activity4.81E-02
168GO:0008378: galactosyltransferase activity4.81E-02
169GO:0004521: endoribonuclease activity4.81E-02
170GO:0030247: polysaccharide binding4.98E-02
171GO:0102483: scopolin beta-glucosidase activity4.98E-02
RankGO TermAdjusted P value
1GO:0005948: acetolactate synthase complex0.00E+00
2GO:0010368: chloroplast isoamylase complex0.00E+00
3GO:0009537: proplastid0.00E+00
4GO:0009507: chloroplast2.54E-38
5GO:0009570: chloroplast stroma3.12E-21
6GO:0009941: chloroplast envelope2.92E-12
7GO:0009534: chloroplast thylakoid1.37E-07
8GO:0009508: plastid chromosome1.97E-07
9GO:0009295: nucleoid2.79E-06
10GO:0009535: chloroplast thylakoid membrane7.25E-06
11GO:0031969: chloroplast membrane2.83E-05
12GO:0080085: signal recognition particle, chloroplast targeting5.69E-05
13GO:0009543: chloroplast thylakoid lumen1.12E-04
14GO:0009501: amyloplast2.10E-04
15GO:0005886: plasma membrane4.96E-04
16GO:0046658: anchored component of plasma membrane5.80E-04
17GO:0009536: plastid1.08E-03
18GO:0009706: chloroplast inner membrane1.16E-03
19GO:0043190: ATP-binding cassette (ABC) transporter complex1.20E-03
20GO:0032541: cortical endoplasmic reticulum1.20E-03
21GO:0009344: nitrite reductase complex [NAD(P)H]1.20E-03
22GO:0030529: intracellular ribonucleoprotein complex1.81E-03
23GO:0042651: thylakoid membrane1.98E-03
24GO:0009654: photosystem II oxygen evolving complex1.98E-03
25GO:0009513: etioplast2.66E-03
26GO:0031357: integral component of chloroplast inner membrane2.66E-03
27GO:0000427: plastid-encoded plastid RNA polymerase complex2.66E-03
28GO:0009707: chloroplast outer membrane2.74E-03
29GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.90E-03
30GO:0009579: thylakoid3.66E-03
31GO:0019897: extrinsic component of plasma membrane4.43E-03
32GO:0010007: magnesium chelatase complex4.43E-03
33GO:0009509: chromoplast4.43E-03
34GO:0030139: endocytic vesicle4.43E-03
35GO:0009528: plastid inner membrane4.43E-03
36GO:0019898: extrinsic component of membrane5.14E-03
37GO:0032432: actin filament bundle6.48E-03
38GO:0015630: microtubule cytoskeleton6.48E-03
39GO:0005719: nuclear euchromatin6.48E-03
40GO:0042646: plastid nucleoid6.48E-03
41GO:0032585: multivesicular body membrane6.48E-03
42GO:0031225: anchored component of membrane7.54E-03
43GO:0010319: stromule7.80E-03
44GO:0030095: chloroplast photosystem II8.39E-03
45GO:0030663: COPI-coated vesicle membrane8.80E-03
46GO:0009527: plastid outer membrane8.80E-03
47GO:0009898: cytoplasmic side of plasma membrane8.80E-03
48GO:0009532: plastid stroma1.43E-02
49GO:0015629: actin cytoskeleton1.72E-02
50GO:0009986: cell surface2.04E-02
51GO:0042807: central vacuole2.04E-02
52GO:0009533: chloroplast stromal thylakoid2.04E-02
53GO:0031977: thylakoid lumen2.16E-02
54GO:0048226: Casparian strip2.39E-02
55GO:0012507: ER to Golgi transport vesicle membrane2.39E-02
56GO:0000326: protein storage vacuole2.75E-02
57GO:0005720: nuclear heterochromatin3.13E-02
58GO:0005680: anaphase-promoting complex3.13E-02
59GO:0042644: chloroplast nucleoid3.13E-02
60GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.13E-02
61GO:0043231: intracellular membrane-bounded organelle3.20E-02
62GO:0005874: microtubule3.32E-02
63GO:0016604: nuclear body3.53E-02
64GO:0015030: Cajal body3.53E-02
65GO:0000418: DNA-directed RNA polymerase IV complex3.94E-02
66GO:0030125: clathrin vesicle coat3.94E-02
67GO:0005884: actin filament4.37E-02
68GO:0005667: transcription factor complex4.73E-02
69GO:0000311: plastid large ribosomal subunit4.81E-02
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Gene type



Gene DE type