Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
2GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
5GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
6GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c6.56E-07
7GO:0010042: response to manganese ion2.00E-05
8GO:0045905: positive regulation of translational termination2.00E-05
9GO:0045901: positive regulation of translational elongation2.00E-05
10GO:0006452: translational frameshifting2.00E-05
11GO:0009311: oligosaccharide metabolic process5.65E-05
12GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity5.65E-05
13GO:0006542: glutamine biosynthetic process7.90E-05
14GO:0009943: adaxial/abaxial axis specification7.90E-05
15GO:1902183: regulation of shoot apical meristem development1.04E-04
16GO:0010358: leaf shaping1.30E-04
17GO:0006828: manganese ion transport1.30E-04
18GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.59E-04
19GO:0015937: coenzyme A biosynthetic process1.88E-04
20GO:0030026: cellular manganese ion homeostasis1.88E-04
21GO:0009642: response to light intensity2.20E-04
22GO:0015780: nucleotide-sugar transport2.85E-04
23GO:0030042: actin filament depolymerization3.19E-04
24GO:0006032: chitin catabolic process3.54E-04
25GO:0000272: polysaccharide catabolic process3.90E-04
26GO:0006816: calcium ion transport3.90E-04
27GO:0010075: regulation of meristem growth4.64E-04
28GO:0010102: lateral root morphogenesis4.64E-04
29GO:0010073: meristem maintenance6.61E-04
30GO:0010584: pollen exine formation8.32E-04
31GO:0042631: cellular response to water deprivation9.19E-04
32GO:0010305: leaf vascular tissue pattern formation9.64E-04
33GO:0042128: nitrate assimilation1.50E-03
34GO:0006099: tricarboxylic acid cycle2.01E-03
35GO:0008643: carbohydrate transport2.44E-03
36GO:0031347: regulation of defense response2.63E-03
37GO:0042538: hyperosmotic salinity response2.70E-03
38GO:0009409: response to cold3.91E-03
39GO:0046686: response to cadmium ion4.49E-03
40GO:0006413: translational initiation4.96E-03
41GO:0016567: protein ubiquitination8.75E-03
42GO:0009611: response to wounding1.64E-02
43GO:0009733: response to auxin2.90E-02
RankGO TermAdjusted P value
1GO:0003796: lysozyme activity0.00E+00
2GO:0004573: mannosyl-oligosaccharide glucosidase activity0.00E+00
3GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
4GO:0008121: ubiquinol-cytochrome-c reductase activity6.56E-07
5GO:0004558: alpha-1,4-glucosidase activity7.41E-06
6GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity7.41E-06
7GO:0004594: pantothenate kinase activity2.00E-05
8GO:0004108: citrate (Si)-synthase activity5.65E-05
9GO:0004356: glutamate-ammonia ligase activity1.04E-04
10GO:0005338: nucleotide-sugar transmembrane transporter activity1.88E-04
11GO:0043022: ribosome binding2.20E-04
12GO:0004568: chitinase activity3.54E-04
13GO:0005388: calcium-transporting ATPase activity4.64E-04
14GO:0003746: translation elongation factor activity1.95E-03
15GO:0008422: beta-glucosidase activity2.07E-03
16GO:0003779: actin binding3.51E-03
17GO:0004842: ubiquitin-protein transferase activity3.99E-03
18GO:0004252: serine-type endopeptidase activity4.49E-03
19GO:0005351: sugar:proton symporter activity5.13E-03
20GO:0003743: translation initiation factor activity5.80E-03
21GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.96E-02
22GO:0005507: copper ion binding2.07E-02
23GO:0016491: oxidoreductase activity3.25E-02
RankGO TermAdjusted P value
1GO:0005750: mitochondrial respiratory chain complex III4.80E-06
2GO:0005740: mitochondrial envelope3.54E-04
3GO:0030176: integral component of endoplasmic reticulum membrane5.40E-04
4GO:0015629: actin cytoskeleton7.88E-04
5GO:0005759: mitochondrial matrix4.88E-03
6GO:0005615: extracellular space5.63E-03
7GO:0005618: cell wall1.14E-02
8GO:0022626: cytosolic ribosome1.56E-02
9GO:0005777: peroxisome1.78E-02
10GO:0005783: endoplasmic reticulum2.02E-02
11GO:0005622: intracellular2.43E-02
12GO:0005737: cytoplasm2.80E-02
13GO:0000139: Golgi membrane3.31E-02
14GO:0005789: endoplasmic reticulum membrane3.61E-02
15GO:0005739: mitochondrion4.88E-02
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Gene type



Gene DE type