Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071284: cellular response to lead ion0.00E+00
2GO:0048227: plasma membrane to endosome transport0.00E+00
3GO:0080026: response to indolebutyric acid1.03E-05
4GO:0080024: indolebutyric acid metabolic process3.02E-05
5GO:0006383: transcription from RNA polymerase III promoter3.02E-05
6GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.06E-04
7GO:0010102: lateral root morphogenesis2.72E-04
8GO:0006885: regulation of pH5.76E-04
9GO:0007264: small GTPase mediated signal transduction6.90E-04
10GO:0051607: defense response to virus8.07E-04
11GO:0048767: root hair elongation1.02E-03
12GO:0006099: tricarboxylic acid cycle1.19E-03
13GO:0006631: fatty acid metabolic process1.29E-03
14GO:0006812: cation transport1.58E-03
15GO:0006813: potassium ion transport1.65E-03
16GO:0006417: regulation of translation1.77E-03
17GO:0042744: hydrogen peroxide catabolic process2.65E-03
18GO:0006413: translational initiation2.88E-03
19GO:0006886: intracellular protein transport5.44E-03
20GO:0055114: oxidation-reduction process7.57E-03
21GO:0006979: response to oxidative stress1.52E-02
22GO:0009733: response to auxin1.64E-02
23GO:0015031: protein transport1.79E-02
24GO:0006508: proteolysis3.36E-02
RankGO TermAdjusted P value
1GO:0005093: Rab GDP-dissociation inhibitor activity1.93E-05
2GO:0004108: citrate (Si)-synthase activity3.02E-05
3GO:0008121: ubiquinol-cytochrome-c reductase activity1.06E-04
4GO:0005451: monovalent cation:proton antiporter activity5.49E-04
5GO:0030276: clathrin binding5.76E-04
6GO:0015299: solute:proton antiporter activity6.04E-04
7GO:0015385: sodium:proton antiporter activity7.18E-04
8GO:0005096: GTPase activator activity1.02E-03
9GO:0005198: structural molecule activity1.47E-03
10GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.65E-03
11GO:0016491: oxidoreductase activity1.70E-03
12GO:0016746: transferase activity, transferring acyl groups2.14E-03
13GO:0004252: serine-type endopeptidase activity2.61E-03
14GO:0003743: translation initiation factor activity3.36E-03
15GO:0004601: peroxidase activity4.06E-03
16GO:0005525: GTP binding1.30E-02
17GO:0020037: heme binding2.09E-02
RankGO TermAdjusted P value
1GO:0005740: mitochondrial envelope2.05E-04
2GO:0005750: mitochondrial respiratory chain complex III2.95E-04
3GO:0012505: endomembrane system2.05E-03
4GO:0005759: mitochondrial matrix2.84E-03
5GO:0005777: peroxisome1.01E-02
6GO:0031225: anchored component of membrane1.25E-02
7GO:0000139: Golgi membrane1.87E-02
8GO:0005774: vacuolar membrane3.67E-02
9GO:0005618: cell wall4.04E-02
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Gene type



Gene DE type