GO Enrichment Analysis of Co-expressed Genes with
AT3G54500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006021: inositol biosynthetic process | 2.02E-06 |
| 2 | GO:0008654: phospholipid biosynthetic process | 2.36E-04 |
| 3 | GO:0071484: cellular response to light intensity | 2.63E-04 |
| 4 | GO:0010117: photoprotection | 4.50E-04 |
| 5 | GO:0035434: copper ion transmembrane transport | 4.50E-04 |
| 6 | GO:0016123: xanthophyll biosynthetic process | 4.50E-04 |
| 7 | GO:0009972: cytidine deamination | 5.51E-04 |
| 8 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 5.51E-04 |
| 9 | GO:0010189: vitamin E biosynthetic process | 6.58E-04 |
| 10 | GO:0008272: sulfate transport | 7.69E-04 |
| 11 | GO:0009644: response to high light intensity | 8.26E-04 |
| 12 | GO:0019827: stem cell population maintenance | 8.84E-04 |
| 13 | GO:0071482: cellular response to light stimulus | 1.00E-03 |
| 14 | GO:0006857: oligopeptide transport | 1.08E-03 |
| 15 | GO:0010206: photosystem II repair | 1.13E-03 |
| 16 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.13E-03 |
| 17 | GO:0010205: photoinhibition | 1.25E-03 |
| 18 | GO:0006535: cysteine biosynthetic process from serine | 1.39E-03 |
| 19 | GO:0009688: abscisic acid biosynthetic process | 1.39E-03 |
| 20 | GO:0009698: phenylpropanoid metabolic process | 1.53E-03 |
| 21 | GO:0009773: photosynthetic electron transport in photosystem I | 1.53E-03 |
| 22 | GO:0006094: gluconeogenesis | 1.82E-03 |
| 23 | GO:0010143: cutin biosynthetic process | 1.97E-03 |
| 24 | GO:0010025: wax biosynthetic process | 2.29E-03 |
| 25 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.29E-03 |
| 26 | GO:0019344: cysteine biosynthetic process | 2.46E-03 |
| 27 | GO:0006825: copper ion transport | 2.62E-03 |
| 28 | GO:0007017: microtubule-based process | 2.62E-03 |
| 29 | GO:0031408: oxylipin biosynthetic process | 2.80E-03 |
| 30 | GO:0010118: stomatal movement | 3.71E-03 |
| 31 | GO:0006606: protein import into nucleus | 3.71E-03 |
| 32 | GO:0010182: sugar mediated signaling pathway | 3.91E-03 |
| 33 | GO:0006970: response to osmotic stress | 4.01E-03 |
| 34 | GO:0019252: starch biosynthetic process | 4.31E-03 |
| 35 | GO:0080167: response to karrikin | 4.61E-03 |
| 36 | GO:0048235: pollen sperm cell differentiation | 4.72E-03 |
| 37 | GO:0044550: secondary metabolite biosynthetic process | 5.01E-03 |
| 38 | GO:0045454: cell redox homeostasis | 5.51E-03 |
| 39 | GO:0051607: defense response to virus | 5.59E-03 |
| 40 | GO:0042128: nitrate assimilation | 6.27E-03 |
| 41 | GO:0032259: methylation | 6.50E-03 |
| 42 | GO:0015995: chlorophyll biosynthetic process | 6.50E-03 |
| 43 | GO:0016311: dephosphorylation | 6.74E-03 |
| 44 | GO:0009408: response to heat | 6.79E-03 |
| 45 | GO:0000160: phosphorelay signal transduction system | 7.22E-03 |
| 46 | GO:0010311: lateral root formation | 7.22E-03 |
| 47 | GO:0006631: fatty acid metabolic process | 9.28E-03 |
| 48 | GO:0042542: response to hydrogen peroxide | 9.55E-03 |
| 49 | GO:0010114: response to red light | 9.82E-03 |
| 50 | GO:0051707: response to other organism | 9.82E-03 |
| 51 | GO:0009736: cytokinin-activated signaling pathway | 1.21E-02 |
| 52 | GO:0006813: potassium ion transport | 1.21E-02 |
| 53 | GO:0006096: glycolytic process | 1.36E-02 |
| 54 | GO:0043086: negative regulation of catalytic activity | 1.36E-02 |
| 55 | GO:0009624: response to nematode | 1.55E-02 |
| 56 | GO:0055114: oxidation-reduction process | 1.91E-02 |
| 57 | GO:0006633: fatty acid biosynthetic process | 2.14E-02 |
| 58 | GO:0016036: cellular response to phosphate starvation | 2.18E-02 |
| 59 | GO:0007623: circadian rhythm | 2.29E-02 |
| 60 | GO:0009414: response to water deprivation | 2.39E-02 |
| 61 | GO:0006810: transport | 3.60E-02 |
| 62 | GO:0005975: carbohydrate metabolic process | 3.71E-02 |
| 63 | GO:0010200: response to chitin | 3.74E-02 |
| 64 | GO:0015979: photosynthesis | 4.01E-02 |
| 65 | GO:0006869: lipid transport | 4.43E-02 |
| 66 | GO:0016042: lipid catabolic process | 4.71E-02 |
| 67 | GO:0048364: root development | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 0.00E+00 |
| 5 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 6 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 7 | GO:0004512: inositol-3-phosphate synthase activity | 1.11E-07 |
| 8 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 4.18E-05 |
| 9 | GO:0050017: L-3-cyanoalanine synthase activity | 1.04E-04 |
| 10 | GO:0008509: anion transmembrane transporter activity | 1.04E-04 |
| 11 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.04E-04 |
| 12 | GO:0004373: glycogen (starch) synthase activity | 1.78E-04 |
| 13 | GO:0017057: 6-phosphogluconolactonase activity | 2.63E-04 |
| 14 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.63E-04 |
| 15 | GO:0009011: starch synthase activity | 3.53E-04 |
| 16 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 4.50E-04 |
| 17 | GO:0004332: fructose-bisphosphate aldolase activity | 5.51E-04 |
| 18 | GO:0004124: cysteine synthase activity | 6.58E-04 |
| 19 | GO:0004126: cytidine deaminase activity | 6.58E-04 |
| 20 | GO:0102391: decanoate--CoA ligase activity | 6.58E-04 |
| 21 | GO:0004467: long-chain fatty acid-CoA ligase activity | 7.69E-04 |
| 22 | GO:0015140: malate transmembrane transporter activity | 7.69E-04 |
| 23 | GO:0005375: copper ion transmembrane transporter activity | 1.00E-03 |
| 24 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.00E-03 |
| 25 | GO:0071949: FAD binding | 1.13E-03 |
| 26 | GO:0004565: beta-galactosidase activity | 1.82E-03 |
| 27 | GO:0003954: NADH dehydrogenase activity | 2.46E-03 |
| 28 | GO:0008324: cation transmembrane transporter activity | 2.62E-03 |
| 29 | GO:0008168: methyltransferase activity | 3.59E-03 |
| 30 | GO:0000156: phosphorelay response regulator activity | 4.93E-03 |
| 31 | GO:0005215: transporter activity | 5.16E-03 |
| 32 | GO:0005200: structural constituent of cytoskeleton | 5.36E-03 |
| 33 | GO:0016597: amino acid binding | 5.59E-03 |
| 34 | GO:0009055: electron carrier activity | 7.28E-03 |
| 35 | GO:0003993: acid phosphatase activity | 8.48E-03 |
| 36 | GO:0004185: serine-type carboxypeptidase activity | 9.82E-03 |
| 37 | GO:0015293: symporter activity | 1.07E-02 |
| 38 | GO:0016874: ligase activity | 1.49E-02 |
| 39 | GO:0015035: protein disulfide oxidoreductase activity | 1.59E-02 |
| 40 | GO:0016829: lyase activity | 1.93E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 1.96E-02 |
| 42 | GO:0008565: protein transporter activity | 2.07E-02 |
| 43 | GO:0046910: pectinesterase inhibitor activity | 2.18E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.72E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 3.17E-02 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 3.92E-02 |
| 47 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.38E-02 |
| 48 | GO:0003924: GTPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.04E-06 |
| 2 | GO:0009534: chloroplast thylakoid | 2.63E-06 |
| 3 | GO:0031304: intrinsic component of mitochondrial inner membrane | 1.04E-04 |
| 4 | GO:0009569: chloroplast starch grain | 1.04E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.65E-04 |
| 6 | GO:0031969: chloroplast membrane | 5.66E-04 |
| 7 | GO:0045298: tubulin complex | 1.13E-03 |
| 8 | GO:0009579: thylakoid | 2.34E-03 |
| 9 | GO:0005618: cell wall | 6.46E-03 |
| 10 | GO:0009941: chloroplast envelope | 8.37E-03 |
| 11 | GO:0031977: thylakoid lumen | 9.28E-03 |
| 12 | GO:0012505: endomembrane system | 1.52E-02 |
| 13 | GO:0010287: plastoglobule | 1.76E-02 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 1.82E-02 |
| 15 | GO:0009705: plant-type vacuole membrane | 2.29E-02 |
| 16 | GO:0048046: apoplast | 2.33E-02 |
| 17 | GO:0005874: microtubule | 3.56E-02 |
| 18 | GO:0005773: vacuole | 3.73E-02 |