co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
2	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
3	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
4	GO:0010200: response to chitin	4.96E-07
5	GO:0006952: defense response	8.13E-07
6	GO:0045088: regulation of innate immune response	1.36E-05
7	GO:0046470: phosphatidylcholine metabolic process	6.38E-05
8	GO:0006643: membrane lipid metabolic process	1.27E-04
9	GO:0055081: anion homeostasis	1.27E-04
10	GO:0007229: integrin-mediated signaling pathway	1.27E-04
11	GO:0009270: response to humidity	1.27E-04
12	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.27E-04
13	GO:0050691: regulation of defense response to virus by host	1.27E-04
14	GO:0051938: L-glutamate import	1.27E-04
15	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.27E-04
16	GO:0009816: defense response to bacterium, incompatible interaction	1.34E-04
17	GO:0007064: mitotic sister chromatid cohesion	1.83E-04
18	GO:0019725: cellular homeostasis	2.94E-04
19	GO:0043091: L-arginine import	2.94E-04
20	GO:0015802: basic amino acid transport	2.94E-04
21	GO:0070588: calcium ion transmembrane transport	3.60E-04
22	GO:0042742: defense response to bacterium	4.56E-04
23	GO:0045793: positive regulation of cell size	4.86E-04
24	GO:0010186: positive regulation of cellular defense response	4.86E-04
25	GO:0048281: inflorescence morphogenesis	4.86E-04
26	GO:0007165: signal transduction	5.34E-04
27	GO:0002679: respiratory burst involved in defense response	6.95E-04
28	GO:0010306: rhamnogalacturonan II biosynthetic process	6.95E-04
29	GO:0060548: negative regulation of cell death	9.21E-04
30	GO:0010483: pollen tube reception	9.21E-04
31	GO:0006468: protein phosphorylation	1.14E-03
32	GO:0009697: salicylic acid biosynthetic process	1.16E-03
33	GO:0030041: actin filament polymerization	1.16E-03
34	GO:0010225: response to UV-C	1.16E-03
35	GO:0006828: manganese ion transport	1.43E-03
36	GO:1900425: negative regulation of defense response to bacterium	1.43E-03
37	GO:0015691: cadmium ion transport	1.43E-03
38	GO:0042372: phylloquinone biosynthetic process	1.71E-03
39	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.71E-03
40	GO:0010468: regulation of gene expression	1.98E-03
41	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.01E-03
42	GO:0010044: response to aluminum ion	2.01E-03
43	GO:0006644: phospholipid metabolic process	2.32E-03
44	GO:0035265: organ growth	2.32E-03
45	GO:0030968: endoplasmic reticulum unfolded protein response	2.65E-03
46	GO:0043562: cellular response to nitrogen levels	2.65E-03
47	GO:0051865: protein autoubiquitination	3.00E-03
48	GO:0090333: regulation of stomatal closure	3.00E-03
49	GO:0009051: pentose-phosphate shunt, oxidative branch	3.00E-03
50	GO:0043069: negative regulation of programmed cell death	3.73E-03
51	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.77E-03
52	GO:0050832: defense response to fungus	3.92E-03
53	GO:0046777: protein autophosphorylation	3.93E-03
54	GO:0006816: calcium ion transport	4.12E-03
55	GO:0009809: lignin biosynthetic process	4.29E-03
56	GO:0006486: protein glycosylation	4.29E-03
57	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.52E-03
58	GO:0012501: programmed cell death	4.52E-03
59	GO:0006006: glucose metabolic process	4.93E-03
60	GO:0055046: microgametogenesis	4.93E-03
61	GO:0002237: response to molecule of bacterial origin	5.36E-03
62	GO:0007034: vacuolar transport	5.36E-03
63	GO:0009266: response to temperature stimulus	5.36E-03
64	GO:0009626: plant-type hypersensitive response	5.39E-03
65	GO:0009969: xyloglucan biosynthetic process	5.80E-03
66	GO:0003333: amino acid transmembrane transport	7.68E-03
67	GO:0006979: response to oxidative stress	7.84E-03
68	GO:0009814: defense response, incompatible interaction	8.18E-03
69	GO:0031348: negative regulation of defense response	8.18E-03
70	GO:0071456: cellular response to hypoxia	8.18E-03
71	GO:0042147: retrograde transport, endosome to Golgi	9.75E-03
72	GO:0040008: regulation of growth	1.00E-02
73	GO:0042391: regulation of membrane potential	1.03E-02
74	GO:0010118: stomatal movement	1.03E-02
75	GO:0010197: polar nucleus fusion	1.09E-02
76	GO:0009741: response to brassinosteroid	1.09E-02
77	GO:0008654: phospholipid biosynthetic process	1.20E-02
78	GO:0002229: defense response to oomycetes	1.26E-02
79	GO:0006891: intra-Golgi vesicle-mediated transport	1.26E-02
80	GO:0009611: response to wounding	1.26E-02
81	GO:0001666: response to hypoxia	1.63E-02
82	GO:0009607: response to biotic stimulus	1.70E-02
83	GO:0009627: systemic acquired resistance	1.77E-02
84	GO:0016049: cell growth	1.90E-02
85	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
86	GO:0008219: cell death	1.97E-02
87	GO:0010311: lateral root formation	2.04E-02
88	GO:0009832: plant-type cell wall biogenesis	2.04E-02
89	GO:0010119: regulation of stomatal movement	2.19E-02
90	GO:0045892: negative regulation of transcription, DNA-templated	2.47E-02
91	GO:0030001: metal ion transport	2.56E-02
92	GO:0042542: response to hydrogen peroxide	2.72E-02
93	GO:0032259: methylation	2.87E-02
94	GO:0016042: lipid catabolic process	2.91E-02
95	GO:0009751: response to salicylic acid	2.95E-02
96	GO:0031347: regulation of defense response	3.20E-02
97	GO:0010224: response to UV-B	3.54E-02
98	GO:0048367: shoot system development	3.98E-02
99	GO:0018105: peptidyl-serine phosphorylation	4.53E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0043531: ADP binding	6.55E-05
3	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.04E-04
4	GO:0004630: phospholipase D activity	1.04E-04
5	GO:0008909: isochorismate synthase activity	1.27E-04
6	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.27E-04
7	GO:0008171: O-methyltransferase activity	1.83E-04
8	GO:0005516: calmodulin binding	2.43E-04
9	GO:0005388: calcium-transporting ATPase activity	2.83E-04
10	GO:0001671: ATPase activator activity	2.94E-04
11	GO:0005509: calcium ion binding	3.86E-04
12	GO:0016301: kinase activity	4.83E-04
13	GO:0042409: caffeoyl-CoA O-methyltransferase activity	4.86E-04
14	GO:0015181: arginine transmembrane transporter activity	6.95E-04
15	GO:0015189: L-lysine transmembrane transporter activity	6.95E-04
16	GO:0042277: peptide binding	9.21E-04
17	GO:0015368: calcium:cation antiporter activity	9.21E-04
18	GO:0004345: glucose-6-phosphate dehydrogenase activity	9.21E-04
19	GO:0015369: calcium:proton antiporter activity	9.21E-04
20	GO:0005313: L-glutamate transmembrane transporter activity	9.21E-04
21	GO:0004674: protein serine/threonine kinase activity	1.13E-03
22	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.16E-03
23	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.16E-03
24	GO:0035252: UDP-xylosyltransferase activity	1.43E-03
25	GO:0004605: phosphatidate cytidylyltransferase activity	1.43E-03
26	GO:0004012: phospholipid-translocating ATPase activity	1.71E-03
27	GO:0008195: phosphatidate phosphatase activity	1.71E-03
28	GO:0005524: ATP binding	1.84E-03
29	GO:0004143: diacylglycerol kinase activity	2.01E-03
30	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.01E-03
31	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.27E-03
32	GO:0005544: calcium-dependent phospholipid binding	2.32E-03
33	GO:0003951: NAD+ kinase activity	2.65E-03
34	GO:0008417: fucosyltransferase activity	3.00E-03
35	GO:0015174: basic amino acid transmembrane transporter activity	3.36E-03
36	GO:0004521: endoribonuclease activity	4.52E-03
37	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.93E-03
38	GO:0015095: magnesium ion transmembrane transporter activity	4.93E-03
39	GO:0030552: cAMP binding	5.80E-03
40	GO:0030553: cGMP binding	5.80E-03
41	GO:0005216: ion channel activity	7.19E-03
42	GO:0051087: chaperone binding	7.19E-03
43	GO:0004707: MAP kinase activity	7.68E-03
44	GO:0005249: voltage-gated potassium channel activity	1.03E-02
45	GO:0030551: cyclic nucleotide binding	1.03E-02
46	GO:0010181: FMN binding	1.14E-02
47	GO:0004197: cysteine-type endopeptidase activity	1.32E-02
48	GO:0003682: chromatin binding	1.73E-02
49	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.77E-02
50	GO:0004683: calmodulin-dependent protein kinase activity	1.83E-02
51	GO:0050660: flavin adenine dinucleotide binding	1.89E-02
52	GO:0004222: metalloendopeptidase activity	2.11E-02
53	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.48E-02
54	GO:0050661: NADP binding	2.56E-02
55	GO:0009055: electron carrier activity	3.21E-02
56	GO:0016298: lipase activity	3.54E-02
57	GO:0015171: amino acid transmembrane transporter activity	3.72E-02
58	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.98E-02
59	GO:0003779: actin binding	4.35E-02
60	GO:0004842: ubiquitin-protein transferase activity	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	8.15E-05
2	GO:0005911: cell-cell junction	1.27E-04
3	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.86E-04
4	GO:0016021: integral component of membrane	6.81E-04
5	GO:0005887: integral component of plasma membrane	1.77E-03
6	GO:0031012: extracellular matrix	4.93E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	5.80E-03
8	GO:0005769: early endosome	6.25E-03
9	GO:0009705: plant-type vacuole membrane	1.05E-02
10	GO:0032580: Golgi cisterna membrane	1.44E-02
11	GO:0005794: Golgi apparatus	2.30E-02
12	GO:0005737: cytoplasm	2.78E-02
13	GO:0031966: mitochondrial membrane	3.29E-02
14	GO:0012505: endomembrane system	4.35E-02