Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035264: multicellular organism growth0.00E+00
2GO:0010200: response to chitin1.64E-07
3GO:0042742: defense response to bacterium2.06E-05
4GO:0080157: regulation of plant-type cell wall organization or biogenesis4.88E-05
5GO:0050691: regulation of defense response to virus by host4.88E-05
6GO:1902065: response to L-glutamate4.88E-05
7GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening2.06E-04
8GO:0034219: carbohydrate transmembrane transport3.01E-04
9GO:0007166: cell surface receptor signaling pathway3.80E-04
10GO:0022622: root system development4.04E-04
11GO:0010508: positive regulation of autophagy4.04E-04
12GO:0010117: photoprotection5.13E-04
13GO:0045487: gibberellin catabolic process5.13E-04
14GO:0008219: cell death5.80E-04
15GO:0009759: indole glucosinolate biosynthetic process6.29E-04
16GO:0098655: cation transmembrane transport7.50E-04
17GO:0070370: cellular heat acclimation8.75E-04
18GO:0010161: red light signaling pathway8.75E-04
19GO:0046470: phosphatidylcholine metabolic process8.75E-04
20GO:0010120: camalexin biosynthetic process1.14E-03
21GO:0043562: cellular response to nitrogen levels1.14E-03
22GO:0050832: defense response to fungus1.32E-03
23GO:0010449: root meristem growth1.43E-03
24GO:0007064: mitotic sister chromatid cohesion1.59E-03
25GO:0009409: response to cold1.73E-03
26GO:0030148: sphingolipid biosynthetic process1.75E-03
27GO:0009682: induced systemic resistance1.75E-03
28GO:0052544: defense response by callose deposition in cell wall1.75E-03
29GO:0015770: sucrose transport1.75E-03
30GO:0007034: vacuolar transport2.26E-03
31GO:0034605: cellular response to heat2.26E-03
32GO:0002237: response to molecule of bacterial origin2.26E-03
33GO:0042343: indole glucosinolate metabolic process2.44E-03
34GO:0005985: sucrose metabolic process2.44E-03
35GO:0009611: response to wounding2.48E-03
36GO:0006071: glycerol metabolic process2.62E-03
37GO:0031408: oxylipin biosynthetic process3.20E-03
38GO:0015992: proton transport3.20E-03
39GO:0098542: defense response to other organism3.20E-03
40GO:0009814: defense response, incompatible interaction3.41E-03
41GO:0071456: cellular response to hypoxia3.41E-03
42GO:0009737: response to abscisic acid3.45E-03
43GO:0001944: vasculature development3.61E-03
44GO:0009625: response to insect3.61E-03
45GO:0071215: cellular response to abscisic acid stimulus3.61E-03
46GO:0009686: gibberellin biosynthetic process3.61E-03
47GO:0006952: defense response3.95E-03
48GO:0000271: polysaccharide biosynthetic process4.26E-03
49GO:0042631: cellular response to water deprivation4.26E-03
50GO:0045489: pectin biosynthetic process4.48E-03
51GO:0006970: response to osmotic stress4.90E-03
52GO:0002229: defense response to oomycetes5.18E-03
53GO:0080167: response to karrikin5.63E-03
54GO:0009639: response to red or far red light5.91E-03
55GO:0051607: defense response to virus6.42E-03
56GO:0045892: negative regulation of transcription, DNA-templated6.85E-03
57GO:0009651: response to salt stress6.86E-03
58GO:0009816: defense response to bacterium, incompatible interaction6.94E-03
59GO:0048573: photoperiodism, flowering7.48E-03
60GO:0016049: cell growth7.75E-03
61GO:0016042: lipid catabolic process8.08E-03
62GO:0009751: response to salicylic acid8.19E-03
63GO:0006629: lipid metabolic process8.31E-03
64GO:0009631: cold acclimation8.88E-03
65GO:0045087: innate immune response9.47E-03
66GO:0016051: carbohydrate biosynthetic process9.47E-03
67GO:0009644: response to high light intensity1.20E-02
68GO:0000165: MAPK cascade1.30E-02
69GO:0031347: regulation of defense response1.30E-02
70GO:0009846: pollen germination1.33E-02
71GO:0009626: plant-type hypersensitive response1.65E-02
72GO:0009624: response to nematode1.79E-02
73GO:0009742: brassinosteroid mediated signaling pathway1.87E-02
74GO:0006468: protein phosphorylation2.41E-02
75GO:0009451: RNA modification2.69E-02
76GO:0009739: response to gibberellin2.87E-02
77GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
78GO:0006470: protein dephosphorylation2.91E-02
79GO:0009414: response to water deprivation2.93E-02
80GO:0009617: response to bacterium3.00E-02
81GO:0010468: regulation of gene expression3.00E-02
82GO:0006351: transcription, DNA-templated3.69E-02
83GO:0006355: regulation of transcription, DNA-templated3.80E-02
84GO:0009723: response to ethylene4.01E-02
85GO:0016192: vesicle-mediated transport4.36E-02
86GO:0046777: protein autophosphorylation4.41E-02
87GO:0044550: secondary metabolite biosynthetic process4.47E-02
88GO:0015979: photosynthesis4.62E-02
89GO:0046686: response to cadmium ion4.65E-02
RankGO TermAdjusted P value
1GO:0046027: phospholipid:diacylglycerol acyltransferase activity4.88E-05
2GO:0045140: inositol phosphoceramide synthase activity1.20E-04
3GO:0016301: kinase activity2.58E-04
4GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.01E-04
5GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity4.04E-04
6GO:0008374: O-acyltransferase activity5.13E-04
7GO:0004709: MAP kinase kinase kinase activity6.29E-04
8GO:0019900: kinase binding7.50E-04
9GO:0004620: phospholipase activity8.75E-04
10GO:0008506: sucrose:proton symporter activity8.75E-04
11GO:0004714: transmembrane receptor protein tyrosine kinase activity1.01E-03
12GO:0004630: phospholipase D activity1.14E-03
13GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.14E-03
14GO:0008559: xenobiotic-transporting ATPase activity1.75E-03
15GO:0047372: acylglycerol lipase activity1.75E-03
16GO:0000175: 3'-5'-exoribonuclease activity2.08E-03
17GO:0004535: poly(A)-specific ribonuclease activity2.26E-03
18GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.76E-03
19GO:0033612: receptor serine/threonine kinase binding3.20E-03
20GO:0008408: 3'-5' exonuclease activity3.20E-03
21GO:0004540: ribonuclease activity3.20E-03
22GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.41E-03
23GO:0043531: ADP binding4.99E-03
24GO:0044212: transcription regulatory region DNA binding5.89E-03
25GO:0005524: ATP binding6.74E-03
26GO:0004721: phosphoprotein phosphatase activity7.48E-03
27GO:0030247: polysaccharide binding7.48E-03
28GO:0004674: protein serine/threonine kinase activity1.23E-02
29GO:0043565: sequence-specific DNA binding1.30E-02
30GO:0016298: lipase activity1.43E-02
31GO:0003700: transcription factor activity, sequence-specific DNA binding1.44E-02
32GO:0008234: cysteine-type peptidase activity1.50E-02
33GO:0045735: nutrient reservoir activity1.57E-02
34GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.61E-02
35GO:0016758: transferase activity, transferring hexosyl groups2.06E-02
36GO:0015144: carbohydrate transmembrane transporter activity2.39E-02
37GO:0005351: sugar:proton symporter activity2.60E-02
38GO:0005509: calcium ion binding2.77E-02
39GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.14E-02
40GO:0003676: nucleic acid binding3.51E-02
41GO:0046982: protein heterodimerization activity3.56E-02
42GO:0003682: chromatin binding3.76E-02
43GO:0061630: ubiquitin protein ligase activity4.36E-02
44GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.78E-02
RankGO TermAdjusted P value
1GO:0030014: CCR4-NOT complex4.88E-05
2GO:0005886: plasma membrane8.63E-04
3GO:0043234: protein complex2.62E-03
4GO:0000325: plant-type vacuole8.88E-03
5GO:0010008: endosome membrane1.61E-02
6GO:0005768: endosome2.70E-02
7GO:0016021: integral component of membrane2.87E-02
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Gene type



Gene DE type