Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010021: amylopectin biosynthetic process7.90E-05
2GO:0000105: histidine biosynthetic process2.20E-04
3GO:0006412: translation3.45E-04
4GO:0009089: lysine biosynthetic process via diaminopimelate3.90E-04
5GO:0042254: ribosome biogenesis4.83E-04
6GO:0000027: ribosomal large subunit assembly6.20E-04
7GO:0019252: starch biosynthetic process1.06E-03
8GO:0000302: response to reactive oxygen species1.10E-03
9GO:0009735: response to cytokinin1.34E-03
10GO:0015995: chlorophyll biosynthetic process1.56E-03
11GO:0007568: aging1.84E-03
12GO:0034599: cellular response to oxidative stress2.01E-03
13GO:0042744: hydrogen peroxide catabolic process4.57E-03
14GO:0055114: oxidation-reduction process5.05E-03
15GO:0009793: embryo development ending in seed dormancy6.65E-03
16GO:0045454: cell redox homeostasis9.27E-03
17GO:0006629: lipid metabolic process1.07E-02
18GO:0042742: defense response to bacterium2.67E-02
19GO:0009733: response to auxin2.90E-02
20GO:0009409: response to cold3.31E-02
RankGO TermAdjusted P value
1GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
2GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
3GO:0003879: ATP phosphoribosyltransferase activity7.41E-06
4GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity7.41E-06
5GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.00E-05
6GO:0033201: alpha-1,4-glucan synthase activity2.00E-05
7GO:0070402: NADPH binding3.67E-05
8GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity3.67E-05
9GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity3.67E-05
10GO:0004373: glycogen (starch) synthase activity3.67E-05
11GO:0003735: structural constituent of ribosome6.62E-05
12GO:0009011: starch synthase activity7.90E-05
13GO:0004130: cytochrome-c peroxidase activity1.30E-04
14GO:0051920: peroxiredoxin activity1.59E-04
15GO:0016209: antioxidant activity2.20E-04
16GO:0004033: aldo-keto reductase (NADP) activity2.20E-04
17GO:0019843: rRNA binding2.22E-04
18GO:0047617: acyl-CoA hydrolase activity3.19E-04
19GO:0004601: peroxidase activity4.74E-04
20GO:0005528: FK506 binding6.20E-04
21GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.56E-03
22GO:0000287: magnesium ion binding6.95E-03
23GO:0016788: hydrolase activity, acting on ester bonds7.13E-03
24GO:0003729: mRNA binding3.54E-02
25GO:0020037: heme binding3.69E-02
26GO:0016787: hydrolase activity4.59E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009507: chloroplast1.20E-12
3GO:0009570: chloroplast stroma3.07E-12
4GO:0009534: chloroplast thylakoid2.21E-09
5GO:0009941: chloroplast envelope4.84E-08
6GO:0009579: thylakoid5.94E-06
7GO:0005840: ribosome1.93E-05
8GO:0031977: thylakoid lumen7.88E-05
9GO:0009535: chloroplast thylakoid membrane8.22E-05
10GO:0009501: amyloplast2.20E-04
11GO:0009543: chloroplast thylakoid lumen2.22E-04
12GO:0010319: stromule1.30E-03
13GO:0015934: large ribosomal subunit1.84E-03
14GO:0022625: cytosolic large ribosomal subunit8.47E-03
15GO:0022626: cytosolic ribosome1.56E-02
16GO:0016020: membrane4.44E-02
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Gene type



Gene DE type