GO Enrichment Analysis of Co-expressed Genes with
AT3G53880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002084: protein depalmitoylation | 0.00E+00 |
| 2 | GO:0030163: protein catabolic process | 7.05E-07 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.57E-06 |
| 4 | GO:0043248: proteasome assembly | 1.54E-05 |
| 5 | GO:0006491: N-glycan processing | 3.94E-05 |
| 6 | GO:1900384: regulation of flavonol biosynthetic process | 7.90E-05 |
| 7 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 7.90E-05 |
| 8 | GO:0009805: coumarin biosynthetic process | 1.89E-04 |
| 9 | GO:0031124: mRNA 3'-end processing | 1.89E-04 |
| 10 | GO:0002215: defense response to nematode | 1.89E-04 |
| 11 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.34E-04 |
| 12 | GO:0010253: UDP-rhamnose biosynthetic process | 3.17E-04 |
| 13 | GO:0006517: protein deglycosylation | 3.17E-04 |
| 14 | GO:0002679: respiratory burst involved in defense response | 4.58E-04 |
| 15 | GO:0010363: regulation of plant-type hypersensitive response | 6.09E-04 |
| 16 | GO:0005513: detection of calcium ion | 7.72E-04 |
| 17 | GO:0048827: phyllome development | 9.42E-04 |
| 18 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 9.42E-04 |
| 19 | GO:0006555: methionine metabolic process | 9.42E-04 |
| 20 | GO:0042176: regulation of protein catabolic process | 9.42E-04 |
| 21 | GO:0010315: auxin efflux | 9.42E-04 |
| 22 | GO:0009817: defense response to fungus, incompatible interaction | 1.06E-03 |
| 23 | GO:0009612: response to mechanical stimulus | 1.12E-03 |
| 24 | GO:0009554: megasporogenesis | 1.12E-03 |
| 25 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.12E-03 |
| 26 | GO:0006605: protein targeting | 1.51E-03 |
| 27 | GO:0050821: protein stabilization | 1.51E-03 |
| 28 | GO:0009699: phenylpropanoid biosynthetic process | 1.72E-03 |
| 29 | GO:0015996: chlorophyll catabolic process | 1.72E-03 |
| 30 | GO:0006379: mRNA cleavage | 1.95E-03 |
| 31 | GO:0046685: response to arsenic-containing substance | 1.95E-03 |
| 32 | GO:0006886: intracellular protein transport | 2.08E-03 |
| 33 | GO:0051555: flavonol biosynthetic process | 2.41E-03 |
| 34 | GO:0072593: reactive oxygen species metabolic process | 2.66E-03 |
| 35 | GO:0043085: positive regulation of catalytic activity | 2.66E-03 |
| 36 | GO:0006378: mRNA polyadenylation | 2.66E-03 |
| 37 | GO:0046856: phosphatidylinositol dephosphorylation | 2.66E-03 |
| 38 | GO:0006790: sulfur compound metabolic process | 2.92E-03 |
| 39 | GO:0046854: phosphatidylinositol phosphorylation | 3.73E-03 |
| 40 | GO:0009225: nucleotide-sugar metabolic process | 3.73E-03 |
| 41 | GO:0007031: peroxisome organization | 3.73E-03 |
| 42 | GO:0006406: mRNA export from nucleus | 4.31E-03 |
| 43 | GO:0015992: proton transport | 4.92E-03 |
| 44 | GO:0009651: response to salt stress | 5.07E-03 |
| 45 | GO:0009814: defense response, incompatible interaction | 5.24E-03 |
| 46 | GO:0019748: secondary metabolic process | 5.24E-03 |
| 47 | GO:0042127: regulation of cell proliferation | 5.89E-03 |
| 48 | GO:0006662: glycerol ether metabolic process | 6.92E-03 |
| 49 | GO:0009816: defense response to bacterium, incompatible interaction | 1.08E-02 |
| 50 | GO:0016192: vesicle-mediated transport | 1.12E-02 |
| 51 | GO:0010411: xyloglucan metabolic process | 1.16E-02 |
| 52 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.16E-02 |
| 53 | GO:0006499: N-terminal protein myristoylation | 1.34E-02 |
| 54 | GO:0006811: ion transport | 1.34E-02 |
| 55 | GO:0000724: double-strand break repair via homologous recombination | 1.43E-02 |
| 56 | GO:0016051: carbohydrate biosynthetic process | 1.48E-02 |
| 57 | GO:0034599: cellular response to oxidative stress | 1.52E-02 |
| 58 | GO:0006631: fatty acid metabolic process | 1.67E-02 |
| 59 | GO:0015031: protein transport | 1.79E-02 |
| 60 | GO:0042546: cell wall biogenesis | 1.82E-02 |
| 61 | GO:0006486: protein glycosylation | 2.19E-02 |
| 62 | GO:0009909: regulation of flower development | 2.35E-02 |
| 63 | GO:0009626: plant-type hypersensitive response | 2.58E-02 |
| 64 | GO:0000398: mRNA splicing, via spliceosome | 3.11E-02 |
| 65 | GO:0007623: circadian rhythm | 4.14E-02 |
| 66 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.28E-02 |
| 67 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.49E-02 |
| 68 | GO:0009617: response to bacterium | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004298: threonine-type endopeptidase activity | 9.92E-08 |
| 2 | GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity | 7.90E-05 |
| 3 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 7.90E-05 |
| 4 | GO:0102293: pheophytinase b activity | 7.90E-05 |
| 5 | GO:0047746: chlorophyllase activity | 1.89E-04 |
| 6 | GO:0010297: heteropolysaccharide binding | 1.89E-04 |
| 7 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 1.89E-04 |
| 8 | GO:0051879: Hsp90 protein binding | 1.89E-04 |
| 9 | GO:0010280: UDP-L-rhamnose synthase activity | 1.89E-04 |
| 10 | GO:0008805: carbon-monoxide oxygenase activity | 1.89E-04 |
| 11 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 1.89E-04 |
| 12 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 1.89E-04 |
| 13 | GO:0008233: peptidase activity | 2.18E-04 |
| 14 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.17E-04 |
| 15 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 3.17E-04 |
| 16 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 4.58E-04 |
| 17 | GO:0008375: acetylglucosaminyltransferase activity | 9.12E-04 |
| 18 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 9.42E-04 |
| 19 | GO:0008474: palmitoyl-(protein) hydrolase activity | 9.42E-04 |
| 20 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.59E-04 |
| 21 | GO:0004559: alpha-mannosidase activity | 1.12E-03 |
| 22 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.12E-03 |
| 23 | GO:0030234: enzyme regulator activity | 2.41E-03 |
| 24 | GO:0008047: enzyme activator activity | 2.41E-03 |
| 25 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.92E-03 |
| 26 | GO:0031072: heat shock protein binding | 3.18E-03 |
| 27 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.45E-03 |
| 28 | GO:0008408: 3'-5' exonuclease activity | 4.92E-03 |
| 29 | GO:0047134: protein-disulfide reductase activity | 6.22E-03 |
| 30 | GO:0004527: exonuclease activity | 6.92E-03 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 7.28E-03 |
| 32 | GO:0016853: isomerase activity | 7.28E-03 |
| 33 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.01E-03 |
| 34 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.77E-03 |
| 35 | GO:0008237: metallopeptidase activity | 9.56E-03 |
| 36 | GO:0051213: dioxygenase activity | 1.04E-02 |
| 37 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.25E-02 |
| 38 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.48E-02 |
| 39 | GO:0031625: ubiquitin protein ligase binding | 2.35E-02 |
| 40 | GO:0022857: transmembrane transporter activity | 2.69E-02 |
| 41 | GO:0051082: unfolded protein binding | 2.81E-02 |
| 42 | GO:0015035: protein disulfide oxidoreductase activity | 2.87E-02 |
| 43 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.68E-02 |
| 44 | GO:0042802: identical protein binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 3.02E-14 |
| 2 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.07E-08 |
| 3 | GO:0005839: proteasome core complex | 9.92E-08 |
| 4 | GO:0005838: proteasome regulatory particle | 3.17E-04 |
| 5 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 3.17E-04 |
| 6 | GO:0030132: clathrin coat of coated pit | 3.17E-04 |
| 7 | GO:0005849: mRNA cleavage factor complex | 4.58E-04 |
| 8 | GO:0005794: Golgi apparatus | 6.19E-04 |
| 9 | GO:0031982: vesicle | 1.51E-03 |
| 10 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.72E-03 |
| 11 | GO:0031307: integral component of mitochondrial outer membrane | 2.92E-03 |
| 12 | GO:0019013: viral nucleocapsid | 3.18E-03 |
| 13 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 5.89E-03 |
| 14 | GO:0032580: Golgi cisterna membrane | 9.16E-03 |
| 15 | GO:0005778: peroxisomal membrane | 9.56E-03 |
| 16 | GO:0009536: plastid | 1.71E-02 |
| 17 | GO:0005681: spliceosomal complex | 2.46E-02 |
| 18 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.99E-02 |
| 19 | GO:0005737: cytoplasm | 3.19E-02 |
| 20 | GO:0005623: cell | 3.36E-02 |
| 21 | GO:0005829: cytosol | 3.42E-02 |
| 22 | GO:0005739: mitochondrion | 4.24E-02 |
| 23 | GO:0005802: trans-Golgi network | 4.45E-02 |
| 24 | GO:0005615: extracellular space | 4.49E-02 |
| 25 | GO:0005622: intracellular | 4.92E-02 |