co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G53668

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006005: L-fucose biosynthetic process	0.00E+00
2	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
5	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
6	GO:0031930: mitochondria-nucleus signaling pathway	1.15E-04
7	GO:0009306: protein secretion	1.16E-04
8	GO:0032469: endoplasmic reticulum calcium ion homeostasis	2.22E-04
9	GO:1902065: response to L-glutamate	2.22E-04
10	GO:0032491: detection of molecule of fungal origin	2.22E-04
11	GO:0034975: protein folding in endoplasmic reticulum	2.22E-04
12	GO:0042350: GDP-L-fucose biosynthetic process	2.22E-04
13	GO:1990641: response to iron ion starvation	2.22E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.22E-04
15	GO:0006101: citrate metabolic process	4.95E-04
16	GO:0043066: negative regulation of apoptotic process	4.95E-04
17	GO:0015012: heparan sulfate proteoglycan biosynthetic process	4.95E-04
18	GO:0080183: response to photooxidative stress	4.95E-04
19	GO:0010155: regulation of proton transport	4.95E-04
20	GO:0006024: glycosaminoglycan biosynthetic process	4.95E-04
21	GO:0009812: flavonoid metabolic process	4.95E-04
22	GO:0002240: response to molecule of oomycetes origin	4.95E-04
23	GO:0002237: response to molecule of bacterial origin	6.86E-04
24	GO:0009901: anther dehiscence	7.67E-04
25	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.05E-04
26	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	8.05E-04
27	GO:0006065: UDP-glucuronate biosynthetic process	8.05E-04
28	GO:0015783: GDP-fucose transport	8.05E-04
29	GO:0052546: cell wall pectin metabolic process	8.05E-04
30	GO:0010731: protein glutathionylation	1.15E-03
31	GO:0055070: copper ion homeostasis	1.15E-03
32	GO:0022622: root system development	1.53E-03
33	GO:0030041: actin filament polymerization	1.95E-03
34	GO:0006097: glyoxylate cycle	1.95E-03
35	GO:0009229: thiamine diphosphate biosynthetic process	1.95E-03
36	GO:0009247: glycolipid biosynthetic process	1.95E-03
37	GO:0009738: abscisic acid-activated signaling pathway	2.09E-03
38	GO:0002238: response to molecule of fungal origin	2.40E-03
39	GO:0006354: DNA-templated transcription, elongation	2.40E-03
40	GO:0001731: formation of translation preinitiation complex	2.40E-03
41	GO:0048317: seed morphogenesis	2.40E-03
42	GO:0009228: thiamine biosynthetic process	2.40E-03
43	GO:0045926: negative regulation of growth	2.89E-03
44	GO:0006904: vesicle docking involved in exocytosis	2.91E-03
45	GO:0010044: response to aluminum ion	3.40E-03
46	GO:0046470: phosphatidylcholine metabolic process	3.40E-03
47	GO:0019375: galactolipid biosynthetic process	3.94E-03
48	GO:0045010: actin nucleation	3.94E-03
49	GO:0031540: regulation of anthocyanin biosynthetic process	3.94E-03
50	GO:0006102: isocitrate metabolic process	3.94E-03
51	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.94E-03
52	GO:1900150: regulation of defense response to fungus	3.94E-03
53	GO:0010204: defense response signaling pathway, resistance gene-independent	4.51E-03
54	GO:0010112: regulation of systemic acquired resistance	5.11E-03
55	GO:0006379: mRNA cleavage	5.11E-03
56	GO:0015780: nucleotide-sugar transport	5.11E-03
57	GO:0007338: single fertilization	5.11E-03
58	GO:0045087: innate immune response	5.38E-03
59	GO:0008202: steroid metabolic process	5.74E-03
60	GO:0030042: actin filament depolymerization	5.74E-03
61	GO:0009086: methionine biosynthetic process	5.74E-03
62	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.74E-03
63	GO:0043069: negative regulation of programmed cell death	6.38E-03
64	GO:0019684: photosynthesis, light reaction	7.06E-03
65	GO:0009089: lysine biosynthetic process via diaminopimelate	7.06E-03
66	GO:0000038: very long-chain fatty acid metabolic process	7.06E-03
67	GO:0045037: protein import into chloroplast stroma	7.76E-03
68	GO:0006626: protein targeting to mitochondrion	8.48E-03
69	GO:0018107: peptidyl-threonine phosphorylation	8.48E-03
70	GO:0042538: hyperosmotic salinity response	8.71E-03
71	GO:0007034: vacuolar transport	9.23E-03
72	GO:0006446: regulation of translational initiation	9.23E-03
73	GO:0009266: response to temperature stimulus	9.23E-03
74	GO:0070588: calcium ion transmembrane transport	1.00E-02
75	GO:0007030: Golgi organization	1.00E-02
76	GO:0010200: response to chitin	1.02E-02
77	GO:0080147: root hair cell development	1.16E-02
78	GO:0006289: nucleotide-excision repair	1.16E-02
79	GO:0000027: ribosomal large subunit assembly	1.16E-02
80	GO:0009863: salicylic acid mediated signaling pathway	1.16E-02
81	GO:0045333: cellular respiration	1.16E-02
82	GO:0006334: nucleosome assembly	1.33E-02
83	GO:0048278: vesicle docking	1.33E-02
84	GO:0018105: peptidyl-serine phosphorylation	1.38E-02
85	GO:0006396: RNA processing	1.38E-02
86	GO:0009814: defense response, incompatible interaction	1.42E-02
87	GO:0010584: pollen exine formation	1.60E-02
88	GO:0009845: seed germination	1.81E-02
89	GO:0006885: regulation of pH	1.89E-02
90	GO:0009960: endosperm development	1.89E-02
91	GO:0061025: membrane fusion	1.99E-02
92	GO:0006623: protein targeting to vacuole	2.09E-02
93	GO:0071554: cell wall organization or biogenesis	2.19E-02
94	GO:0032502: developmental process	2.30E-02
95	GO:0007264: small GTPase mediated signal transduction	2.30E-02
96	GO:0010150: leaf senescence	2.31E-02
97	GO:0030163: protein catabolic process	2.41E-02
98	GO:0006464: cellular protein modification process	2.52E-02
99	GO:0009567: double fertilization forming a zygote and endosperm	2.52E-02
100	GO:0042742: defense response to bacterium	2.52E-02
101	GO:0006470: protein dephosphorylation	2.65E-02
102	GO:0008380: RNA splicing	2.76E-02
103	GO:0009737: response to abscisic acid	2.78E-02
104	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.97E-02
105	GO:0010029: regulation of seed germination	2.97E-02
106	GO:0006906: vesicle fusion	3.09E-02
107	GO:0035556: intracellular signal transduction	3.52E-02
108	GO:0015031: protein transport	3.58E-02
109	GO:0006499: N-terminal protein myristoylation	3.70E-02
110	GO:0010043: response to zinc ion	3.82E-02
111	GO:0000724: double-strand break repair via homologous recombination	3.95E-02
112	GO:0006099: tricarboxylic acid cycle	4.21E-02
113	GO:0055085: transmembrane transport	4.41E-02
114	GO:0006887: exocytosis	4.61E-02
115	GO:0006897: endocytosis	4.61E-02
116	GO:0016192: vesicle-mediated transport	4.65E-02
117	GO:0046777: protein autophosphorylation	4.73E-02
118	GO:0042542: response to hydrogen peroxide	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0005212: structural constituent of eye lens	0.00E+00
5	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.22E-04
6	GO:0046481: digalactosyldiacylglycerol synthase activity	2.22E-04
7	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.22E-04
8	GO:0050577: GDP-L-fucose synthase activity	2.22E-04
9	GO:0015036: disulfide oxidoreductase activity	4.95E-04
10	GO:0003994: aconitate hydratase activity	4.95E-04
11	GO:0032934: sterol binding	4.95E-04
12	GO:0005509: calcium ion binding	5.10E-04
13	GO:0005457: GDP-fucose transmembrane transporter activity	8.05E-04
14	GO:0003979: UDP-glucose 6-dehydrogenase activity	8.05E-04
15	GO:0035250: UDP-galactosyltransferase activity	1.15E-03
16	GO:0009916: alternative oxidase activity	1.53E-03
17	GO:0008641: small protein activating enzyme activity	1.95E-03
18	GO:0004040: amidase activity	1.95E-03
19	GO:0003730: mRNA 3'-UTR binding	2.89E-03
20	GO:0004656: procollagen-proline 4-dioxygenase activity	2.89E-03
21	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.91E-03
22	GO:0004525: ribonuclease III activity	3.94E-03
23	GO:0004708: MAP kinase kinase activity	3.94E-03
24	GO:0008142: oxysterol binding	4.51E-03
25	GO:0004630: phospholipase D activity	4.51E-03
26	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.51E-03
27	GO:0046872: metal ion binding	7.75E-03
28	GO:0015198: oligopeptide transporter activity	7.76E-03
29	GO:0005262: calcium channel activity	8.48E-03
30	GO:0005388: calcium-transporting ATPase activity	8.48E-03
31	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.48E-03
32	GO:0031418: L-ascorbic acid binding	1.16E-02
33	GO:0051087: chaperone binding	1.24E-02
34	GO:0016874: ligase activity	1.26E-02
35	GO:0003779: actin binding	1.30E-02
36	GO:0004707: MAP kinase activity	1.33E-02
37	GO:0015035: protein disulfide oxidoreductase activity	1.38E-02
38	GO:0003756: protein disulfide isomerase activity	1.60E-02
39	GO:0005451: monovalent cation:proton antiporter activity	1.79E-02
40	GO:0050662: coenzyme binding	1.99E-02
41	GO:0016853: isomerase activity	1.99E-02
42	GO:0015299: solute:proton antiporter activity	1.99E-02
43	GO:0015297: antiporter activity	2.21E-02
44	GO:0015385: sodium:proton antiporter activity	2.41E-02
45	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.41E-02
46	GO:0008194: UDP-glycosyltransferase activity	2.59E-02
47	GO:0008483: transaminase activity	2.63E-02
48	GO:0016413: O-acetyltransferase activity	2.74E-02
49	GO:0016301: kinase activity	2.75E-02
50	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.94E-02
51	GO:0008375: acetylglucosaminyltransferase activity	3.09E-02
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.09E-02
53	GO:0004683: calmodulin-dependent protein kinase activity	3.20E-02
54	GO:0004806: triglyceride lipase activity	3.20E-02
55	GO:0003676: nucleic acid binding	3.36E-02
56	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.45E-02
57	GO:0004222: metalloendopeptidase activity	3.70E-02
58	GO:0003682: chromatin binding	3.78E-02
59	GO:0008270: zinc ion binding	3.89E-02
60	GO:0004842: ubiquitin-protein transferase activity	4.04E-02
61	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.08E-02
62	GO:0000149: SNARE binding	4.34E-02
63	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.34E-02
64	GO:0051539: 4 iron, 4 sulfur cluster binding	4.47E-02
65	GO:0005484: SNAP receptor activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0031314: extrinsic component of mitochondrial inner membrane	4.95E-04
2	GO:0016021: integral component of membrane	6.45E-04
3	GO:0009898: cytoplasmic side of plasma membrane	1.53E-03
4	GO:0005789: endoplasmic reticulum membrane	1.54E-03
5	GO:0000813: ESCRT I complex	1.95E-03
6	GO:0031463: Cul3-RING ubiquitin ligase complex	2.40E-03
7	GO:0016282: eukaryotic 43S preinitiation complex	2.40E-03
8	GO:0033290: eukaryotic 48S preinitiation complex	2.89E-03
9	GO:0005737: cytoplasm	3.76E-03
10	GO:0043231: intracellular membrane-bounded organelle	4.25E-03
11	GO:0030665: clathrin-coated vesicle membrane	5.74E-03
12	GO:0017119: Golgi transport complex	6.38E-03
13	GO:0031902: late endosome membrane	6.39E-03
14	GO:0005783: endoplasmic reticulum	6.83E-03
15	GO:0030176: integral component of endoplasmic reticulum membrane	1.00E-02
16	GO:0005795: Golgi stack	1.00E-02
17	GO:0070469: respiratory chain	1.24E-02
18	GO:0000139: Golgi membrane	1.29E-02
19	GO:0005743: mitochondrial inner membrane	1.46E-02
20	GO:0015629: actin cytoskeleton	1.51E-02
21	GO:0009543: chloroplast thylakoid lumen	1.67E-02
22	GO:0005770: late endosome	1.89E-02
23	GO:0000145: exocyst	2.30E-02
24	GO:0071944: cell periphery	2.41E-02
25	GO:0016020: membrane	2.69E-02
26	GO:0005794: Golgi apparatus	3.23E-02
27	GO:0009707: chloroplast outer membrane	3.45E-02
28	GO:0015934: large ribosomal subunit	3.82E-02
29	GO:0000325: plant-type vacuole	3.82E-02
30	GO:0031201: SNARE complex	4.61E-02
31	GO:0022625: cytosolic large ribosomal subunit	4.65E-02
32	GO:0090406: pollen tube	4.88E-02