co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G53150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0055122: response to very low light intensity stimulus	0.00E+00
2	GO:1902065: response to L-glutamate	5.34E-05
3	GO:0034975: protein folding in endoplasmic reticulum	5.34E-05
4	GO:0000077: DNA damage checkpoint	5.34E-05
5	GO:0000303: response to superoxide	5.34E-05
6	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	5.34E-05
7	GO:0040020: regulation of meiotic nuclear division	1.30E-04
8	GO:0009812: flavonoid metabolic process	1.30E-04
9	GO:0008535: respiratory chain complex IV assembly	1.30E-04
10	GO:0006517: protein deglycosylation	2.22E-04
11	GO:1901562: response to paraquat	2.22E-04
12	GO:0050482: arachidonic acid secretion	3.25E-04
13	GO:0006809: nitric oxide biosynthetic process	3.25E-04
14	GO:0009738: abscisic acid-activated signaling pathway	4.29E-04
15	GO:0022622: root system development	4.35E-04
16	GO:0006457: protein folding	6.69E-04
17	GO:0006354: DNA-templated transcription, elongation	6.76E-04
18	GO:0001731: formation of translation preinitiation complex	6.76E-04
19	GO:0030307: positive regulation of cell growth	9.40E-04
20	GO:0000209: protein polyubiquitination	1.07E-03
21	GO:0006644: phospholipid metabolic process	1.08E-03
22	GO:0006491: N-glycan processing	1.08E-03
23	GO:1900150: regulation of defense response to fungus	1.08E-03
24	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.24E-03
25	GO:0042538: hyperosmotic salinity response	1.28E-03
26	GO:0006379: mRNA cleavage	1.38E-03
27	GO:0010332: response to gamma radiation	1.38E-03
28	GO:0030042: actin filament depolymerization	1.54E-03
29	GO:0009086: methionine biosynthetic process	1.54E-03
30	GO:0009873: ethylene-activated signaling pathway	1.86E-03
31	GO:0006913: nucleocytoplasmic transport	1.88E-03
32	GO:0006396: RNA processing	1.99E-03
33	GO:0012501: programmed cell death	2.06E-03
34	GO:0010102: lateral root morphogenesis	2.25E-03
35	GO:0006446: regulation of translational initiation	2.43E-03
36	GO:0034605: cellular response to heat	2.43E-03
37	GO:0007034: vacuolar transport	2.43E-03
38	GO:0070588: calcium ion transmembrane transport	2.63E-03
39	GO:0007030: Golgi organization	2.63E-03
40	GO:0009901: anther dehiscence	2.63E-03
41	GO:2000377: regulation of reactive oxygen species metabolic process	3.03E-03
42	GO:0048278: vesicle docking	3.46E-03
43	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.69E-03
44	GO:0009306: protein secretion	4.13E-03
45	GO:0061025: membrane fusion	5.09E-03
46	GO:0009860: pollen tube growth	5.48E-03
47	GO:0010193: response to ozone	5.60E-03
48	GO:0009630: gravitropism	5.86E-03
49	GO:0016032: viral process	5.86E-03
50	GO:0006464: cellular protein modification process	6.39E-03
51	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	7.50E-03
52	GO:0009816: defense response to bacterium, incompatible interaction	7.50E-03
53	GO:0006906: vesicle fusion	7.79E-03
54	GO:0048573: photoperiodism, flowering	8.09E-03
55	GO:0016042: lipid catabolic process	9.04E-03
56	GO:0010119: regulation of stomatal movement	9.61E-03
57	GO:0009867: jasmonic acid mediated signaling pathway	1.02E-02
58	GO:0045087: innate immune response	1.02E-02
59	GO:0006810: transport	1.11E-02
60	GO:0006839: mitochondrial transport	1.12E-02
61	GO:0031347: regulation of defense response	1.40E-02
62	GO:0009846: pollen germination	1.44E-02
63	GO:0006857: oligopeptide transport	1.59E-02
64	GO:0009555: pollen development	1.66E-02
65	GO:0006096: glycolytic process	1.70E-02
66	GO:0006351: transcription, DNA-templated	2.00E-02
67	GO:0009845: seed germination	2.41E-02
68	GO:0009790: embryo development	2.55E-02
69	GO:0010150: leaf senescence	2.87E-02
70	GO:0010228: vegetative to reproductive phase transition of meristem	2.96E-02
71	GO:0009414: response to water deprivation	3.28E-02
72	GO:0006970: response to osmotic stress	4.12E-02
73	GO:0009723: response to ethylene	4.34E-02
74	GO:0010200: response to chitin	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0016530: metallochaperone activity	0.00E+00
2	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	5.34E-05
3	GO:0047150: betaine-homocysteine S-methyltransferase activity	5.34E-05
4	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	1.30E-04
5	GO:0046527: glucosyltransferase activity	4.35E-04
6	GO:0008641: small protein activating enzyme activity	5.52E-04
7	GO:0004623: phospholipase A2 activity	5.52E-04
8	GO:0047714: galactolipase activity	6.76E-04
9	GO:0035252: UDP-xylosyltransferase activity	6.76E-04
10	GO:0003950: NAD+ ADP-ribosyltransferase activity	8.05E-04
11	GO:0004525: ribonuclease III activity	1.08E-03
12	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.23E-03
13	GO:0030955: potassium ion binding	1.54E-03
14	GO:0004743: pyruvate kinase activity	1.54E-03
15	GO:0022857: transmembrane transporter activity	1.82E-03
16	GO:0015198: oligopeptide transporter activity	2.06E-03
17	GO:0005388: calcium-transporting ATPase activity	2.25E-03
18	GO:0004707: MAP kinase activity	3.46E-03
19	GO:0003756: protein disulfide isomerase activity	4.13E-03
20	GO:0043565: sequence-specific DNA binding	4.20E-03
21	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.12E-03
22	GO:0061630: ubiquitin protein ligase activity	6.63E-03
23	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.66E-03
24	GO:0016798: hydrolase activity, acting on glycosyl bonds	8.09E-03
25	GO:0004806: triglyceride lipase activity	8.09E-03
26	GO:0004004: ATP-dependent RNA helicase activity	8.09E-03
27	GO:0004222: metalloendopeptidase activity	9.30E-03
28	GO:0000149: SNARE binding	1.09E-02
29	GO:0003676: nucleic acid binding	1.11E-02
30	GO:0005484: SNAP receptor activity	1.23E-02
31	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.51E-02
32	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.82E-02
33	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.82E-02
34	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.88E-02
35	GO:0003779: actin binding	1.90E-02
36	GO:0015035: protein disulfide oxidoreductase activity	1.98E-02
37	GO:0004386: helicase activity	2.07E-02
38	GO:0008270: zinc ion binding	2.47E-02
39	GO:0015297: antiporter activity	2.77E-02
40	GO:0008194: UDP-glycosyltransferase activity	3.11E-02
41	GO:0003743: translation initiation factor activity	3.20E-02
42	GO:0016301: kinase activity	3.24E-02
43	GO:0044212: transcription regulatory region DNA binding	3.36E-02
44	GO:0008168: methyltransferase activity	3.81E-02
45	GO:0000287: magnesium ion binding	3.86E-02
46	GO:0004497: monooxygenase activity	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0016282: eukaryotic 43S preinitiation complex	6.76E-04
2	GO:0033290: eukaryotic 48S preinitiation complex	8.05E-04
3	GO:0016272: prefoldin complex	8.05E-04
4	GO:0016363: nuclear matrix	8.05E-04
5	GO:0015629: actin cytoskeleton	3.90E-03
6	GO:0005788: endoplasmic reticulum lumen	7.50E-03
7	GO:0005743: mitochondrial inner membrane	8.66E-03
8	GO:0015934: large ribosomal subunit	9.61E-03
9	GO:0043231: intracellular membrane-bounded organelle	1.03E-02
10	GO:0031201: SNARE complex	1.16E-02
11	GO:0009543: chloroplast thylakoid lumen	2.28E-02
12	GO:0005783: endoplasmic reticulum	2.45E-02
13	GO:0005802: trans-Golgi network	2.66E-02
14	GO:0005622: intracellular	2.95E-02
15	GO:0005768: endosome	3.02E-02
16	GO:0005737: cytoplasm	3.19E-02
17	GO:0000139: Golgi membrane	4.53E-02
18	GO:0022625: cytosolic large ribosomal subunit	4.73E-02