Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
5GO:1902001: fatty acid transmembrane transport0.00E+00
6GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
7GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
8GO:1900367: positive regulation of defense response to insect0.00E+00
9GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
10GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
11GO:0009312: oligosaccharide biosynthetic process0.00E+00
12GO:0046865: terpenoid transport0.00E+00
13GO:0071456: cellular response to hypoxia1.32E-05
14GO:0009751: response to salicylic acid2.47E-05
15GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.27E-05
16GO:0010150: leaf senescence7.00E-05
17GO:0045227: capsule polysaccharide biosynthetic process8.00E-05
18GO:0033358: UDP-L-arabinose biosynthetic process8.00E-05
19GO:0009643: photosynthetic acclimation1.80E-04
20GO:0006012: galactose metabolic process2.73E-04
21GO:0042742: defense response to bacterium2.79E-04
22GO:0010200: response to chitin3.42E-04
23GO:0051707: response to other organism3.51E-04
24GO:1990542: mitochondrial transmembrane transport3.60E-04
25GO:0032107: regulation of response to nutrient levels3.60E-04
26GO:1902600: hydrogen ion transmembrane transport3.60E-04
27GO:0048508: embryonic meristem development3.60E-04
28GO:0015760: glucose-6-phosphate transport3.60E-04
29GO:0046256: 2,4,6-trinitrotoluene catabolic process3.60E-04
30GO:0043547: positive regulation of GTPase activity3.60E-04
31GO:0019567: arabinose biosynthetic process3.60E-04
32GO:1901183: positive regulation of camalexin biosynthetic process3.60E-04
33GO:0050691: regulation of defense response to virus by host3.60E-04
34GO:0009968: negative regulation of signal transduction3.60E-04
35GO:0009636: response to toxic substance4.22E-04
36GO:0009749: response to glucose5.03E-04
37GO:0010112: regulation of systemic acquired resistance5.82E-04
38GO:1900426: positive regulation of defense response to bacterium6.87E-04
39GO:0080183: response to photooxidative stress7.83E-04
40GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.83E-04
41GO:0010618: aerenchyma formation7.83E-04
42GO:0006024: glycosaminoglycan biosynthetic process7.83E-04
43GO:0055088: lipid homeostasis7.83E-04
44GO:0015908: fatty acid transport7.83E-04
45GO:0044419: interspecies interaction between organisms7.83E-04
46GO:0009945: radial axis specification7.83E-04
47GO:0015712: hexose phosphate transport7.83E-04
48GO:0010115: regulation of abscisic acid biosynthetic process7.83E-04
49GO:0015865: purine nucleotide transport7.83E-04
50GO:0010271: regulation of chlorophyll catabolic process7.83E-04
51GO:0015012: heparan sulfate proteoglycan biosynthetic process7.83E-04
52GO:0071668: plant-type cell wall assembly7.83E-04
53GO:0045836: positive regulation of meiotic nuclear division1.27E-03
54GO:0015783: GDP-fucose transport1.27E-03
55GO:0015692: lead ion transport1.27E-03
56GO:0015714: phosphoenolpyruvate transport1.27E-03
57GO:0080168: abscisic acid transport1.27E-03
58GO:1900055: regulation of leaf senescence1.27E-03
59GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.27E-03
60GO:0006954: inflammatory response1.27E-03
61GO:0080163: regulation of protein serine/threonine phosphatase activity1.27E-03
62GO:0034051: negative regulation of plant-type hypersensitive response1.27E-03
63GO:0035436: triose phosphate transmembrane transport1.27E-03
64GO:0009407: toxin catabolic process1.38E-03
65GO:0009225: nucleotide-sugar metabolic process1.50E-03
66GO:0009867: jasmonic acid mediated signaling pathway1.65E-03
67GO:0046902: regulation of mitochondrial membrane permeability1.83E-03
68GO:0072583: clathrin-dependent endocytosis1.83E-03
69GO:0010731: protein glutathionylation1.83E-03
70GO:2000377: regulation of reactive oxygen species metabolic process1.85E-03
71GO:0009863: salicylic acid mediated signaling pathway1.85E-03
72GO:0080147: root hair cell development1.85E-03
73GO:0006897: endocytosis2.05E-03
74GO:0009269: response to desiccation2.25E-03
75GO:0010109: regulation of photosynthesis2.45E-03
76GO:0015713: phosphoglycerate transport2.45E-03
77GO:0080142: regulation of salicylic acid biosynthetic process2.45E-03
78GO:0009625: response to insect2.69E-03
79GO:0010225: response to UV-C3.14E-03
80GO:0045927: positive regulation of growth3.14E-03
81GO:0034052: positive regulation of plant-type hypersensitive response3.14E-03
82GO:0030041: actin filament polymerization3.14E-03
83GO:0010942: positive regulation of cell death3.88E-03
84GO:0048317: seed morphogenesis3.88E-03
85GO:0010337: regulation of salicylic acid metabolic process3.88E-03
86GO:0009759: indole glucosinolate biosynthetic process3.88E-03
87GO:0009626: plant-type hypersensitive response4.46E-03
88GO:0010193: response to ozone4.55E-03
89GO:0010310: regulation of hydrogen peroxide metabolic process4.67E-03
90GO:0080036: regulation of cytokinin-activated signaling pathway4.67E-03
91GO:0071470: cellular response to osmotic stress4.67E-03
92GO:0045926: negative regulation of growth4.67E-03
93GO:0009942: longitudinal axis specification4.67E-03
94GO:0007264: small GTPase mediated signal transduction4.86E-03
95GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.52E-03
96GO:1900056: negative regulation of leaf senescence5.52E-03
97GO:0050829: defense response to Gram-negative bacterium5.52E-03
98GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.52E-03
99GO:0045010: actin nucleation6.41E-03
100GO:0031540: regulation of anthocyanin biosynthetic process6.41E-03
101GO:0010928: regulation of auxin mediated signaling pathway6.41E-03
102GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.41E-03
103GO:0009819: drought recovery6.41E-03
104GO:0043068: positive regulation of programmed cell death6.41E-03
105GO:2000031: regulation of salicylic acid mediated signaling pathway7.36E-03
106GO:0010208: pollen wall assembly7.36E-03
107GO:0010120: camalexin biosynthetic process7.36E-03
108GO:0006997: nucleus organization7.36E-03
109GO:0006950: response to stress7.76E-03
110GO:0015780: nucleotide-sugar transport8.35E-03
111GO:0007338: single fertilization8.35E-03
112GO:0048268: clathrin coat assembly9.38E-03
113GO:0010380: regulation of chlorophyll biosynthetic process9.38E-03
114GO:0008202: steroid metabolic process9.38E-03
115GO:0006499: N-terminal protein myristoylation9.49E-03
116GO:0007568: aging9.96E-03
117GO:0051555: flavonol biosynthetic process1.05E-02
118GO:0009870: defense response signaling pathway, resistance gene-dependent1.05E-02
119GO:0006032: chitin catabolic process1.05E-02
120GO:0009684: indoleacetic acid biosynthetic process1.16E-02
121GO:0019684: photosynthesis, light reaction1.16E-02
122GO:0055085: transmembrane transport1.16E-02
123GO:0009089: lysine biosynthetic process via diaminopimelate1.16E-02
124GO:0009753: response to jasmonic acid1.20E-02
125GO:0012501: programmed cell death1.28E-02
126GO:0002213: defense response to insect1.28E-02
127GO:0010105: negative regulation of ethylene-activated signaling pathway1.28E-02
128GO:0018107: peptidyl-threonine phosphorylation1.40E-02
129GO:0006829: zinc II ion transport1.40E-02
130GO:2000028: regulation of photoperiodism, flowering1.40E-02
131GO:0002237: response to molecule of bacterial origin1.52E-02
132GO:0007034: vacuolar transport1.52E-02
133GO:0010167: response to nitrate1.65E-02
134GO:0046688: response to copper ion1.65E-02
135GO:0006855: drug transmembrane transport1.65E-02
136GO:0031347: regulation of defense response1.71E-02
137GO:0000162: tryptophan biosynthetic process1.78E-02
138GO:0006812: cation transport1.78E-02
139GO:0006486: protein glycosylation1.91E-02
140GO:0006813: potassium ion transport1.91E-02
141GO:0006289: nucleotide-excision repair1.92E-02
142GO:0006825: copper ion transport2.06E-02
143GO:0006334: nucleosome assembly2.20E-02
144GO:0051321: meiotic cell cycle2.20E-02
145GO:0016998: cell wall macromolecule catabolic process2.20E-02
146GO:0006952: defense response2.26E-02
147GO:0031348: negative regulation of defense response2.35E-02
148GO:0010017: red or far-red light signaling pathway2.35E-02
149GO:2000022: regulation of jasmonic acid mediated signaling pathway2.35E-02
150GO:0030433: ubiquitin-dependent ERAD pathway2.35E-02
151GO:0006468: protein phosphorylation2.39E-02
152GO:0006979: response to oxidative stress2.61E-02
153GO:0042127: regulation of cell proliferation2.65E-02
154GO:0009624: response to nematode2.72E-02
155GO:0018105: peptidyl-serine phosphorylation2.80E-02
156GO:0015979: photosynthesis2.83E-02
157GO:0050832: defense response to fungus2.94E-02
158GO:0042391: regulation of membrane potential2.97E-02
159GO:0000271: polysaccharide biosynthetic process2.97E-02
160GO:0010182: sugar mediated signaling pathway3.13E-02
161GO:0009960: endosperm development3.13E-02
162GO:0045489: pectin biosynthetic process3.13E-02
163GO:0006885: regulation of pH3.13E-02
164GO:0007165: signal transduction3.56E-02
165GO:0071554: cell wall organization or biogenesis3.64E-02
166GO:0002229: defense response to oomycetes3.64E-02
167GO:0019761: glucosinolate biosynthetic process3.81E-02
168GO:0048235: pollen sperm cell differentiation3.81E-02
169GO:0009790: embryo development3.96E-02
170GO:0009567: double fertilization forming a zygote and endosperm4.17E-02
171GO:0006914: autophagy4.17E-02
172GO:0071805: potassium ion transmembrane transport4.35E-02
173GO:0006904: vesicle docking involved in exocytosis4.35E-02
174GO:0001666: response to hypoxia4.72E-02
175GO:0009816: defense response to bacterium, incompatible interaction4.91E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0003978: UDP-glucose 4-epimerase activity5.19E-06
6GO:0050373: UDP-arabinose 4-epimerase activity8.00E-05
7GO:0043295: glutathione binding3.16E-04
8GO:0032050: clathrin heavy chain binding3.60E-04
9GO:2001227: quercitrin binding3.60E-04
10GO:0019707: protein-cysteine S-acyltransferase activity3.60E-04
11GO:2001147: camalexin binding3.60E-04
12GO:0015245: fatty acid transporter activity3.60E-04
13GO:0010285: L,L-diaminopimelate aminotransferase activity3.60E-04
14GO:0047364: desulfoglucosinolate sulfotransferase activity7.83E-04
15GO:0015152: glucose-6-phosphate transmembrane transporter activity7.83E-04
16GO:0032934: sterol binding7.83E-04
17GO:0048531: beta-1,3-galactosyltransferase activity7.83E-04
18GO:0015036: disulfide oxidoreductase activity7.83E-04
19GO:0004568: chitinase activity8.01E-04
20GO:0008559: xenobiotic-transporting ATPase activity9.22E-04
21GO:0071917: triose-phosphate transmembrane transporter activity1.27E-03
22GO:0005457: GDP-fucose transmembrane transporter activity1.27E-03
23GO:0004324: ferredoxin-NADP+ reductase activity1.27E-03
24GO:0016531: copper chaperone activity1.27E-03
25GO:0032403: protein complex binding1.27E-03
26GO:0017077: oxidative phosphorylation uncoupler activity1.83E-03
27GO:0022890: inorganic cation transmembrane transporter activity1.83E-03
28GO:0004364: glutathione transferase activity2.16E-03
29GO:0015120: phosphoglycerate transmembrane transporter activity2.45E-03
30GO:0004834: tryptophan synthase activity2.45E-03
31GO:0004737: pyruvate decarboxylase activity2.45E-03
32GO:0004930: G-protein coupled receptor activity2.45E-03
33GO:0005471: ATP:ADP antiporter activity3.14E-03
34GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.14E-03
35GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.17E-03
36GO:0043565: sequence-specific DNA binding3.45E-03
37GO:0030976: thiamine pyrophosphate binding3.88E-03
38GO:0015299: solute:proton antiporter activity3.96E-03
39GO:0009927: histidine phosphotransfer kinase activity4.67E-03
40GO:0004656: procollagen-proline 4-dioxygenase activity4.67E-03
41GO:0016831: carboxy-lyase activity5.52E-03
42GO:0047893: flavonol 3-O-glucosyltransferase activity6.41E-03
43GO:0008375: acetylglucosaminyltransferase activity7.35E-03
44GO:0008142: oxysterol binding7.36E-03
45GO:0015297: antiporter activity9.88E-03
46GO:0005545: 1-phosphatidylinositol binding1.05E-02
47GO:0004864: protein phosphatase inhibitor activity1.05E-02
48GO:0004713: protein tyrosine kinase activity1.05E-02
49GO:0015386: potassium:proton antiporter activity1.16E-02
50GO:0005315: inorganic phosphate transmembrane transporter activity1.40E-02
51GO:0030552: cAMP binding1.65E-02
52GO:0030553: cGMP binding1.65E-02
53GO:0008146: sulfotransferase activity1.65E-02
54GO:0004674: protein serine/threonine kinase activity1.70E-02
55GO:0031418: L-ascorbic acid binding1.92E-02
56GO:0003954: NADH dehydrogenase activity1.92E-02
57GO:0001046: core promoter sequence-specific DNA binding1.92E-02
58GO:0043531: ADP binding2.05E-02
59GO:0043424: protein histidine kinase binding2.06E-02
60GO:0005216: ion channel activity2.06E-02
61GO:0015079: potassium ion transmembrane transporter activity2.06E-02
62GO:0008324: cation transmembrane transporter activity2.06E-02
63GO:0019706: protein-cysteine S-palmitoyltransferase activity2.20E-02
64GO:0035251: UDP-glucosyltransferase activity2.20E-02
65GO:0005509: calcium ion binding2.25E-02
66GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.35E-02
67GO:0016301: kinase activity2.52E-02
68GO:0015035: protein disulfide oxidoreductase activity2.80E-02
69GO:0005249: voltage-gated potassium channel activity2.97E-02
70GO:0030551: cyclic nucleotide binding2.97E-02
71GO:0005451: monovalent cation:proton antiporter activity2.97E-02
72GO:0046873: metal ion transmembrane transporter activity3.13E-02
73GO:0030276: clathrin binding3.13E-02
74GO:0016758: transferase activity, transferring hexosyl groups3.31E-02
75GO:0016740: transferase activity3.40E-02
76GO:0004872: receptor activity3.47E-02
77GO:0003700: transcription factor activity, sequence-specific DNA binding3.78E-02
78GO:0004197: cysteine-type endopeptidase activity3.81E-02
79GO:0015385: sodium:proton antiporter activity3.99E-02
80GO:0008483: transaminase activity4.35E-02
81GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.35E-02
82GO:0004842: ubiquitin-protein transferase activity4.39E-02
83GO:0016413: O-acetyltransferase activity4.54E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane4.68E-06
2GO:0000164: protein phosphatase type 1 complex1.25E-04
3GO:0000138: Golgi trans cisterna3.60E-04
4GO:0005794: Golgi apparatus4.50E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane7.83E-04
6GO:0031314: extrinsic component of mitochondrial inner membrane7.83E-04
7GO:0005901: caveola7.83E-04
8GO:0030139: endocytic vesicle1.27E-03
9GO:0070062: extracellular exosome1.83E-03
10GO:0005886: plasma membrane1.86E-03
11GO:0000813: ESCRT I complex3.14E-03
12GO:0031463: Cul3-RING ubiquitin ligase complex3.88E-03
13GO:0032580: Golgi cisterna membrane5.52E-03
14GO:0000421: autophagosome membrane6.41E-03
15GO:0005743: mitochondrial inner membrane9.63E-03
16GO:0000325: plant-type vacuole9.96E-03
17GO:0005740: mitochondrial envelope1.05E-02
18GO:0030125: clathrin vesicle coat1.05E-02
19GO:0005795: Golgi stack1.65E-02
20GO:0005769: early endosome1.78E-02
21GO:0005758: mitochondrial intermembrane space1.92E-02
22GO:0005905: clathrin-coated pit2.20E-02
23GO:0031410: cytoplasmic vesicle2.35E-02
24GO:0030136: clathrin-coated vesicle2.81E-02
25GO:0005777: peroxisome3.11E-02
26GO:0005770: late endosome3.13E-02
27GO:0009504: cell plate3.47E-02
28GO:0031965: nuclear membrane3.47E-02
29GO:0000145: exocyst3.81E-02
30GO:0005774: vacuolar membrane3.99E-02
31GO:0000139: Golgi membrane4.25E-02
32GO:0043231: intracellular membrane-bounded organelle4.38E-02
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Gene type



Gene DE type