Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G52870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042742: defense response to bacterium1.16E-05
2GO:0080157: regulation of plant-type cell wall organization or biogenesis1.87E-05
3GO:0050691: regulation of defense response to virus by host1.87E-05
4GO:0042754: negative regulation of circadian rhythm4.85E-05
5GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening8.61E-05
6GO:0048194: Golgi vesicle budding1.30E-04
7GO:0007231: osmosensory signaling pathway1.30E-04
8GO:0010200: response to chitin1.54E-04
9GO:0033500: carbohydrate homeostasis1.78E-04
10GO:0045727: positive regulation of translation1.78E-04
11GO:0009759: indole glucosinolate biosynthetic process2.85E-04
12GO:0006952: defense response4.41E-04
13GO:0043562: cellular response to nitrogen levels5.27E-04
14GO:0009699: phenylpropanoid biosynthetic process5.27E-04
15GO:0009611: response to wounding5.42E-04
16GO:0007064: mitotic sister chromatid cohesion7.30E-04
17GO:0043069: negative regulation of programmed cell death7.30E-04
18GO:0072593: reactive oxygen species metabolic process8.02E-04
19GO:0030148: sphingolipid biosynthetic process8.02E-04
20GO:0009682: induced systemic resistance8.02E-04
21GO:0052544: defense response by callose deposition in cell wall8.02E-04
22GO:0002237: response to molecule of bacterial origin1.02E-03
23GO:0070588: calcium ion transmembrane transport1.10E-03
24GO:0009814: defense response, incompatible interaction1.52E-03
25GO:0009625: response to insect1.61E-03
26GO:0042391: regulation of membrane potential1.89E-03
27GO:0009751: response to salicylic acid2.47E-03
28GO:0009408: response to heat2.50E-03
29GO:0009753: response to jasmonic acid2.68E-03
30GO:0009607: response to biotic stimulus3.05E-03
31GO:0009816: defense response to bacterium, incompatible interaction3.05E-03
32GO:0008219: cell death3.51E-03
33GO:0009817: defense response to fungus, incompatible interaction3.51E-03
34GO:0006468: protein phosphorylation3.73E-03
35GO:0031347: regulation of defense response5.60E-03
36GO:0009809: lignin biosynthetic process6.02E-03
37GO:0007623: circadian rhythm1.13E-02
38GO:0009451: RNA modification1.15E-02
39GO:0009409: response to cold1.21E-02
40GO:0009739: response to gibberellin1.22E-02
41GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.22E-02
42GO:0009617: response to bacterium1.28E-02
43GO:0010468: regulation of gene expression1.28E-02
44GO:0009723: response to ethylene1.70E-02
45GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.83E-02
46GO:0009737: response to abscisic acid1.90E-02
47GO:0045892: negative regulation of transcription, DNA-templated2.06E-02
48GO:0016310: phosphorylation2.19E-02
49GO:0050832: defense response to fungus2.66E-02
50GO:0006357: regulation of transcription from RNA polymerase II promoter2.88E-02
51GO:0009651: response to salt stress3.00E-02
52GO:0009555: pollen development3.55E-02
53GO:0035556: intracellular signal transduction3.69E-02
RankGO TermAdjusted P value
1GO:0045140: inositol phosphoceramide synthase activity4.85E-05
2GO:0016174: NAD(P)H oxidase activity8.61E-05
3GO:0005516: calmodulin binding9.38E-05
4GO:0042277: peptide binding1.78E-04
5GO:0004012: phospholipid-translocating ATPase activity3.42E-04
6GO:0016621: cinnamoyl-CoA reductase activity4.02E-04
7GO:0047617: acyl-CoA hydrolase activity6.61E-04
8GO:0005262: calcium channel activity9.49E-04
9GO:0005388: calcium-transporting ATPase activity9.49E-04
10GO:0000175: 3'-5'-exoribonuclease activity9.49E-04
11GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.49E-04
12GO:0004535: poly(A)-specific ribonuclease activity1.02E-03
13GO:0030552: cAMP binding1.10E-03
14GO:0030553: cGMP binding1.10E-03
15GO:0005216: ion channel activity1.35E-03
16GO:0008408: 3'-5' exonuclease activity1.44E-03
17GO:0004540: ribonuclease activity1.44E-03
18GO:0004674: protein serine/threonine kinase activity1.88E-03
19GO:0005249: voltage-gated potassium channel activity1.89E-03
20GO:0030551: cyclic nucleotide binding1.89E-03
21GO:0050662: coenzyme binding2.09E-03
22GO:0016853: isomerase activity2.09E-03
23GO:0016301: kinase activity3.07E-03
24GO:0005524: ATP binding5.83E-03
25GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups6.91E-03
26GO:0044212: transcription regulatory region DNA binding8.89E-03
27GO:0000287: magnesium ion binding1.52E-02
28GO:0004601: peroxidase activity1.54E-02
29GO:0016788: hydrolase activity, acting on ester bonds1.56E-02
30GO:0003682: chromatin binding1.60E-02
31GO:0043531: ADP binding1.64E-02
32GO:0061630: ubiquitin protein ligase activity1.85E-02
33GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.03E-02
34GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.19E-02
35GO:0016757: transferase activity, transferring glycosyl groups3.04E-02
36GO:0016740: transferase activity4.09E-02
37GO:0030246: carbohydrate binding4.39E-02
38GO:0043565: sequence-specific DNA binding4.56E-02
RankGO TermAdjusted P value
1GO:0030014: CCR4-NOT complex1.87E-05
2GO:0016021: integral component of membrane1.38E-03
3GO:0005887: integral component of plasma membrane3.38E-03
4GO:0005886: plasma membrane4.91E-03
5GO:0005802: trans-Golgi network7.03E-03
6GO:0009706: chloroplast inner membrane7.69E-03
7GO:0005794: Golgi apparatus1.33E-02
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Gene type



Gene DE type