co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009249: protein lipoylation	0.00E+00
2	GO:0044154: histone H3-K14 acetylation	0.00E+00
3	GO:1901698: response to nitrogen compound	0.00E+00
4	GO:0009106: lipoate metabolic process	0.00E+00
5	GO:0046460: neutral lipid biosynthetic process	0.00E+00
6	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
7	GO:0043972: histone H3-K23 acetylation	0.00E+00
8	GO:0007155: cell adhesion	4.08E-05
9	GO:0051171: regulation of nitrogen compound metabolic process	8.09E-05
10	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	8.09E-05
11	GO:1902265: abscisic acid homeostasis	8.09E-05
12	GO:0043971: histone H3-K18 acetylation	8.09E-05
13	GO:1901135: carbohydrate derivative metabolic process	8.09E-05
14	GO:0048657: anther wall tapetum cell differentiation	8.09E-05
15	GO:0042547: cell wall modification involved in multidimensional cell growth	8.09E-05
16	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.93E-04
17	GO:0006435: threonyl-tRNA aminoacylation	1.93E-04
18	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.93E-04
19	GO:0001578: microtubule bundle formation	3.24E-04
20	GO:0031022: nuclear migration along microfilament	3.24E-04
21	GO:0006013: mannose metabolic process	3.24E-04
22	GO:0071705: nitrogen compound transport	3.24E-04
23	GO:0006166: purine ribonucleoside salvage	4.66E-04
24	GO:0010306: rhamnogalacturonan II biosynthetic process	4.66E-04
25	GO:0010255: glucose mediated signaling pathway	4.66E-04
26	GO:0006168: adenine salvage	4.66E-04
27	GO:0051322: anaphase	6.21E-04
28	GO:0071249: cellular response to nitrate	6.21E-04
29	GO:0006552: leucine catabolic process	6.21E-04
30	GO:0007020: microtubule nucleation	6.21E-04
31	GO:0015846: polyamine transport	6.21E-04
32	GO:0009902: chloroplast relocation	6.21E-04
33	GO:0009107: lipoate biosynthetic process	7.86E-04
34	GO:0044209: AMP salvage	7.86E-04
35	GO:0046785: microtubule polymerization	7.86E-04
36	GO:0034389: lipid particle organization	1.14E-03
37	GO:0009903: chloroplast avoidance movement	1.14E-03
38	GO:0048528: post-embryonic root development	1.34E-03
39	GO:0022904: respiratory electron transport chain	1.34E-03
40	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.54E-03
41	GO:0009704: de-etiolation	1.54E-03
42	GO:0051707: response to other organism	1.74E-03
43	GO:0022900: electron transport chain	1.76E-03
44	GO:0007389: pattern specification process	1.76E-03
45	GO:0044030: regulation of DNA methylation	1.76E-03
46	GO:0019432: triglyceride biosynthetic process	1.98E-03
47	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.22E-03
48	GO:0010380: regulation of chlorophyll biosynthetic process	2.22E-03
49	GO:0010192: mucilage biosynthetic process	2.46E-03
50	GO:0006415: translational termination	2.71E-03
51	GO:0009750: response to fructose	2.71E-03
52	GO:0015706: nitrate transport	2.97E-03
53	GO:0009740: gibberellic acid mediated signaling pathway	3.12E-03
54	GO:0009767: photosynthetic electron transport chain	3.24E-03
55	GO:0030048: actin filament-based movement	3.24E-03
56	GO:0009825: multidimensional cell growth	3.81E-03
57	GO:0080188: RNA-directed DNA methylation	3.81E-03
58	GO:0010167: response to nitrate	3.81E-03
59	GO:0006071: glycerol metabolic process	4.10E-03
60	GO:0010187: negative regulation of seed germination	4.40E-03
61	GO:0006825: copper ion transport	4.70E-03
62	GO:0043622: cortical microtubule organization	4.70E-03
63	GO:0048511: rhythmic process	5.02E-03
64	GO:0080092: regulation of pollen tube growth	5.34E-03
65	GO:0009814: defense response, incompatible interaction	5.34E-03
66	GO:0010584: pollen exine formation	6.01E-03
67	GO:0009739: response to gibberellin	6.36E-03
68	GO:0048868: pollen tube development	7.06E-03
69	GO:0010268: brassinosteroid homeostasis	7.06E-03
70	GO:0009646: response to absence of light	7.42E-03
71	GO:0009749: response to glucose	7.79E-03
72	GO:0016132: brassinosteroid biosynthetic process	8.17E-03
73	GO:0071554: cell wall organization or biogenesis	8.17E-03
74	GO:0007264: small GTPase mediated signal transduction	8.56E-03
75	GO:0010583: response to cyclopentenone	8.56E-03
76	GO:0071281: cellular response to iron ion	8.94E-03
77	GO:0016125: sterol metabolic process	9.34E-03
78	GO:0010252: auxin homeostasis	9.34E-03
79	GO:0009860: pollen tube growth	9.47E-03
80	GO:0000910: cytokinesis	1.02E-02
81	GO:0016126: sterol biosynthetic process	1.06E-02
82	GO:0009911: positive regulation of flower development	1.06E-02
83	GO:0010029: regulation of seed germination	1.10E-02
84	GO:0009910: negative regulation of flower development	1.41E-02
85	GO:0009637: response to blue light	1.51E-02
86	GO:0009853: photorespiration	1.51E-02
87	GO:0006508: proteolysis	1.65E-02
88	GO:0009926: auxin polar transport	1.80E-02
89	GO:0009744: response to sucrose	1.80E-02
90	GO:0008283: cell proliferation	1.80E-02
91	GO:0009873: ethylene-activated signaling pathway	2.09E-02
92	GO:0009664: plant-type cell wall organization	2.12E-02
93	GO:0051603: proteolysis involved in cellular protein catabolic process	2.29E-02
94	GO:0010224: response to UV-B	2.29E-02
95	GO:0006417: regulation of translation	2.40E-02
96	GO:0006096: glycolytic process	2.51E-02
97	GO:0009738: abscisic acid-activated signaling pathway	2.78E-02
98	GO:0055085: transmembrane transport	3.64E-02
99	GO:0042744: hydrogen peroxide catabolic process	3.69E-02
100	GO:0045490: pectin catabolic process	4.23E-02
101	GO:0007623: circadian rhythm	4.23E-02
102	GO:0010228: vegetative to reproductive phase transition of meristem	4.37E-02
103	GO:0010468: regulation of gene expression	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
3	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
4	GO:0019808: polyamine binding	0.00E+00
5	GO:0048039: ubiquinone binding	0.00E+00
6	GO:0097367: carbohydrate derivative binding	8.09E-05
7	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	8.09E-05
8	GO:0004008: copper-exporting ATPase activity	8.09E-05
9	GO:0017118: lipoyltransferase activity	1.93E-04
10	GO:0016415: octanoyltransferase activity	1.93E-04
11	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	1.93E-04
12	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	1.93E-04
13	GO:0004829: threonine-tRNA ligase activity	1.93E-04
14	GO:0004848: ureidoglycolate hydrolase activity	3.24E-04
15	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	3.24E-04
16	GO:0000254: C-4 methylsterol oxidase activity	4.66E-04
17	GO:0003999: adenine phosphoribosyltransferase activity	4.66E-04
18	GO:0080032: methyl jasmonate esterase activity	6.21E-04
19	GO:0010385: double-stranded methylated DNA binding	6.21E-04
20	GO:0004559: alpha-mannosidase activity	1.14E-03
21	GO:0004144: diacylglycerol O-acyltransferase activity	1.14E-03
22	GO:0005375: copper ion transmembrane transporter activity	1.76E-03
23	GO:0051537: 2 iron, 2 sulfur cluster binding	1.88E-03
24	GO:0003747: translation release factor activity	1.98E-03
25	GO:0009672: auxin:proton symporter activity	2.22E-03
26	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.71E-03
27	GO:0010329: auxin efflux transmembrane transporter activity	3.24E-03
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.24E-03
29	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.52E-03
30	GO:0004176: ATP-dependent peptidase activity	5.02E-03
31	GO:0030570: pectate lyase activity	5.67E-03
32	GO:0004402: histone acetyltransferase activity	6.70E-03
33	GO:0008080: N-acetyltransferase activity	7.06E-03
34	GO:0001085: RNA polymerase II transcription factor binding	7.06E-03
35	GO:0016853: isomerase activity	7.42E-03
36	GO:0016413: O-acetyltransferase activity	1.02E-02
37	GO:0030247: polysaccharide binding	1.19E-02
38	GO:0052689: carboxylic ester hydrolase activity	1.21E-02
39	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.41E-02
40	GO:0003993: acid phosphatase activity	1.56E-02
41	GO:0042393: histone binding	1.65E-02
42	GO:0051539: 4 iron, 4 sulfur cluster binding	1.65E-02
43	GO:0009055: electron carrier activity	1.73E-02
44	GO:0004185: serine-type carboxypeptidase activity	1.80E-02
45	GO:0016757: transferase activity, transferring glycosyl groups	1.92E-02
46	GO:0046872: metal ion binding	2.75E-02
47	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.43E-02
48	GO:0016829: lyase activity	3.56E-02
49	GO:0004252: serine-type endopeptidase activity	3.62E-02
50	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.69E-02
51	GO:0030246: carbohydrate binding	3.85E-02
52	GO:0008017: microtubule binding	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0042597: periplasmic space	0.00E+00
3	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	8.09E-05
4	GO:0009897: external side of plasma membrane	3.24E-04
5	GO:0072686: mitotic spindle	7.86E-04
6	GO:0046658: anchored component of plasma membrane	1.04E-03
7	GO:0010005: cortical microtubule, transverse to long axis	1.14E-03
8	GO:0031305: integral component of mitochondrial inner membrane	1.54E-03
9	GO:0005811: lipid particle	1.76E-03
10	GO:0031225: anchored component of membrane	2.03E-03
11	GO:0055028: cortical microtubule	2.46E-03
12	GO:0005740: mitochondrial envelope	2.46E-03
13	GO:0016324: apical plasma membrane	2.46E-03
14	GO:0005938: cell cortex	3.24E-03
15	GO:0009574: preprophase band	3.24E-03
16	GO:0045271: respiratory chain complex I	4.70E-03
17	GO:0005576: extracellular region	5.90E-03
18	GO:0005802: trans-Golgi network	1.02E-02
19	GO:0005667: transcription factor complex	1.14E-02
20	GO:0005622: intracellular	1.16E-02
21	GO:0005768: endosome	1.20E-02
22	GO:0009507: chloroplast	1.59E-02
23	GO:0005819: spindle	1.60E-02
24	GO:0009505: plant-type cell wall	1.82E-02
25	GO:0005856: cytoskeleton	1.96E-02
26	GO:0031966: mitochondrial membrane	2.12E-02
27	GO:0005747: mitochondrial respiratory chain complex I	2.57E-02
28	GO:0005623: cell	3.43E-02
29	GO:0009524: phragmoplast	3.49E-02
30	GO:0005773: vacuole	3.69E-02