Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
5GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
6GO:0009312: oligosaccharide biosynthetic process0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002764: immune response-regulating signaling pathway0.00E+00
9GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
10GO:0033587: shikimate biosynthetic process0.00E+00
11GO:0032491: detection of molecule of fungal origin0.00E+00
12GO:0046865: terpenoid transport0.00E+00
13GO:0010324: membrane invagination0.00E+00
14GO:0009268: response to pH0.00E+00
15GO:0006468: protein phosphorylation3.80E-08
16GO:0010200: response to chitin1.21E-06
17GO:0010150: leaf senescence6.58E-06
18GO:0042742: defense response to bacterium4.69E-05
19GO:0071456: cellular response to hypoxia4.80E-05
20GO:0031348: negative regulation of defense response4.80E-05
21GO:0009626: plant-type hypersensitive response6.59E-05
22GO:0010112: regulation of systemic acquired resistance6.80E-05
23GO:0046777: protein autophosphorylation7.39E-05
24GO:0060548: negative regulation of cell death1.64E-04
25GO:0045227: capsule polysaccharide biosynthetic process1.64E-04
26GO:0033358: UDP-L-arabinose biosynthetic process1.64E-04
27GO:0080142: regulation of salicylic acid biosynthetic process1.64E-04
28GO:0009751: response to salicylic acid1.83E-04
29GO:0006904: vesicle docking involved in exocytosis2.39E-04
30GO:0002237: response to molecule of bacterial origin2.48E-04
31GO:0009697: salicylic acid biosynthetic process2.50E-04
32GO:0006952: defense response2.67E-04
33GO:0002238: response to molecule of fungal origin3.52E-04
34GO:0048508: embryonic meristem development5.54E-04
35GO:0010365: positive regulation of ethylene biosynthetic process5.54E-04
36GO:0051938: L-glutamate import5.54E-04
37GO:0015760: glucose-6-phosphate transport5.54E-04
38GO:0046256: 2,4,6-trinitrotoluene catabolic process5.54E-04
39GO:0019567: arabinose biosynthetic process5.54E-04
40GO:0051180: vitamin transport5.54E-04
41GO:0015969: guanosine tetraphosphate metabolic process5.54E-04
42GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.54E-04
43GO:0010941: regulation of cell death5.54E-04
44GO:0030974: thiamine pyrophosphate transport5.54E-04
45GO:1901183: positive regulation of camalexin biosynthetic process5.54E-04
46GO:0019673: GDP-mannose metabolic process5.54E-04
47GO:0042759: long-chain fatty acid biosynthetic process5.54E-04
48GO:2000022: regulation of jasmonic acid mediated signaling pathway5.66E-04
49GO:0009787: regulation of abscisic acid-activated signaling pathway7.46E-04
50GO:2000031: regulation of salicylic acid mediated signaling pathway9.08E-04
51GO:0010204: defense response signaling pathway, resistance gene-independent9.08E-04
52GO:0035556: intracellular signal transduction9.42E-04
53GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.19E-03
54GO:0046939: nucleotide phosphorylation1.19E-03
55GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.19E-03
56GO:0015802: basic amino acid transport1.19E-03
57GO:0080185: effector dependent induction by symbiont of host immune response1.19E-03
58GO:0010618: aerenchyma formation1.19E-03
59GO:1902066: regulation of cell wall pectin metabolic process1.19E-03
60GO:0010115: regulation of abscisic acid biosynthetic process1.19E-03
61GO:0015865: purine nucleotide transport1.19E-03
62GO:0002240: response to molecule of oomycetes origin1.19E-03
63GO:0010271: regulation of chlorophyll catabolic process1.19E-03
64GO:0044419: interspecies interaction between organisms1.19E-03
65GO:0010541: acropetal auxin transport1.19E-03
66GO:0031349: positive regulation of defense response1.19E-03
67GO:0019725: cellular homeostasis1.19E-03
68GO:0009945: radial axis specification1.19E-03
69GO:0015893: drug transport1.19E-03
70GO:0015712: hexose phosphate transport1.19E-03
71GO:0043091: L-arginine import1.19E-03
72GO:0006855: drug transmembrane transport1.20E-03
73GO:0010193: response to ozone1.23E-03
74GO:1900426: positive regulation of defense response to bacterium1.28E-03
75GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.28E-03
76GO:0006470: protein dephosphorylation1.79E-03
77GO:0009737: response to abscisic acid1.85E-03
78GO:0009617: response to bacterium1.93E-03
79GO:0045836: positive regulation of meiotic nuclear division1.96E-03
80GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.96E-03
81GO:0015692: lead ion transport1.96E-03
82GO:0015714: phosphoenolpyruvate transport1.96E-03
83GO:0080168: abscisic acid transport1.96E-03
84GO:0048586: regulation of long-day photoperiodism, flowering1.96E-03
85GO:0032922: circadian regulation of gene expression1.96E-03
86GO:0006954: inflammatory response1.96E-03
87GO:0010498: proteasomal protein catabolic process1.96E-03
88GO:0034051: negative regulation of plant-type hypersensitive response1.96E-03
89GO:0016045: detection of bacterium1.96E-03
90GO:1900140: regulation of seedling development1.96E-03
91GO:0010359: regulation of anion channel activity1.96E-03
92GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.96E-03
93GO:1901672: positive regulation of systemic acquired resistance1.96E-03
94GO:0035436: triose phosphate transmembrane transport1.96E-03
95GO:0051176: positive regulation of sulfur metabolic process1.96E-03
96GO:0009816: defense response to bacterium, incompatible interaction2.12E-03
97GO:0009620: response to fungus2.24E-03
98GO:0055046: microgametogenesis2.25E-03
99GO:0034605: cellular response to heat2.54E-03
100GO:0007034: vacuolar transport2.54E-03
101GO:0009611: response to wounding2.74E-03
102GO:0009817: defense response to fungus, incompatible interaction2.78E-03
103GO:0000187: activation of MAPK activity2.84E-03
104GO:0048194: Golgi vesicle budding2.84E-03
105GO:0010306: rhamnogalacturonan II biosynthetic process2.84E-03
106GO:0046902: regulation of mitochondrial membrane permeability2.84E-03
107GO:0010104: regulation of ethylene-activated signaling pathway2.84E-03
108GO:0010731: protein glutathionylation2.84E-03
109GO:0009399: nitrogen fixation2.84E-03
110GO:0071323: cellular response to chitin2.84E-03
111GO:0046513: ceramide biosynthetic process2.84E-03
112GO:0046836: glycolipid transport2.84E-03
113GO:0009225: nucleotide-sugar metabolic process2.85E-03
114GO:0010167: response to nitrate2.85E-03
115GO:0006499: N-terminal protein myristoylation3.15E-03
116GO:0009867: jasmonic acid mediated signaling pathway3.77E-03
117GO:0010109: regulation of photosynthesis3.83E-03
118GO:0071219: cellular response to molecule of bacterial origin3.83E-03
119GO:0010508: positive regulation of autophagy3.83E-03
120GO:0015713: phosphoglycerate transport3.83E-03
121GO:0006542: glutamine biosynthetic process3.83E-03
122GO:0007165: signal transduction4.31E-03
123GO:0006887: exocytosis4.70E-03
124GO:0010017: red or far-red light signaling pathway4.70E-03
125GO:0016226: iron-sulfur cluster assembly4.70E-03
126GO:0018344: protein geranylgeranylation4.91E-03
127GO:0010225: response to UV-C4.91E-03
128GO:0009247: glycolipid biosynthetic process4.91E-03
129GO:0045927: positive regulation of growth4.91E-03
130GO:0034052: positive regulation of plant-type hypersensitive response4.91E-03
131GO:0009625: response to insect5.13E-03
132GO:0006012: galactose metabolic process5.13E-03
133GO:0051707: response to other organism5.21E-03
134GO:0010405: arabinogalactan protein metabolic process6.09E-03
135GO:1900425: negative regulation of defense response to bacterium6.09E-03
136GO:0010337: regulation of salicylic acid metabolic process6.09E-03
137GO:0018258: protein O-linked glycosylation via hydroxyproline6.09E-03
138GO:0009643: photosynthetic acclimation6.09E-03
139GO:0010942: positive regulation of cell death6.09E-03
140GO:0042391: regulation of membrane potential6.56E-03
141GO:2000037: regulation of stomatal complex patterning7.36E-03
142GO:0010310: regulation of hydrogen peroxide metabolic process7.36E-03
143GO:0045926: negative regulation of growth7.36E-03
144GO:0009942: longitudinal axis specification7.36E-03
145GO:0009423: chorismate biosynthetic process7.36E-03
146GO:0031930: mitochondria-nucleus signaling pathway7.36E-03
147GO:0009749: response to glucose8.17E-03
148GO:0071446: cellular response to salicylic acid stimulus8.71E-03
149GO:1900056: negative regulation of leaf senescence8.71E-03
150GO:0070370: cellular heat acclimation8.71E-03
151GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.71E-03
152GO:1900057: positive regulation of leaf senescence8.71E-03
153GO:0002229: defense response to oomycetes8.75E-03
154GO:0009409: response to cold9.09E-03
155GO:0007264: small GTPase mediated signal transduction9.36E-03
156GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.01E-02
157GO:0009819: drought recovery1.01E-02
158GO:0019375: galactolipid biosynthetic process1.01E-02
159GO:0030162: regulation of proteolysis1.01E-02
160GO:0045010: actin nucleation1.01E-02
161GO:0010099: regulation of photomorphogenesis1.17E-02
162GO:0009932: cell tip growth1.17E-02
163GO:0009624: response to nematode1.20E-02
164GO:0018105: peptidyl-serine phosphorylation1.25E-02
165GO:0001666: response to hypoxia1.27E-02
166GO:0055085: transmembrane transport1.28E-02
167GO:0006098: pentose-phosphate shunt1.33E-02
168GO:0090333: regulation of stomatal closure1.33E-02
169GO:0046916: cellular transition metal ion homeostasis1.33E-02
170GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.35E-02
171GO:0009627: systemic acquired resistance1.42E-02
172GO:0042128: nitrate assimilation1.42E-02
173GO:0048268: clathrin coat assembly1.49E-02
174GO:0048354: mucilage biosynthetic process involved in seed coat development1.49E-02
175GO:0010380: regulation of chlorophyll biosynthetic process1.49E-02
176GO:0006950: response to stress1.50E-02
177GO:0007064: mitotic sister chromatid cohesion1.67E-02
178GO:0009870: defense response signaling pathway, resistance gene-dependent1.67E-02
179GO:0006032: chitin catabolic process1.67E-02
180GO:0009407: toxin catabolic process1.84E-02
181GO:0009089: lysine biosynthetic process via diaminopimelate1.85E-02
182GO:0009073: aromatic amino acid family biosynthetic process1.85E-02
183GO:0048527: lateral root development1.93E-02
184GO:0010119: regulation of stomatal movement1.93E-02
185GO:0009790: embryo development1.95E-02
186GO:0008361: regulation of cell size2.04E-02
187GO:0015706: nitrate transport2.04E-02
188GO:0002213: defense response to insect2.04E-02
189GO:0010105: negative regulation of ethylene-activated signaling pathway2.04E-02
190GO:0045087: innate immune response2.11E-02
191GO:0018107: peptidyl-threonine phosphorylation2.23E-02
192GO:0006829: zinc II ion transport2.23E-02
193GO:0009785: blue light signaling pathway2.23E-02
194GO:0010229: inflorescence development2.23E-02
195GO:0006839: mitochondrial transport2.41E-02
196GO:0009266: response to temperature stimulus2.43E-02
197GO:0006897: endocytosis2.52E-02
198GO:0046854: phosphatidylinositol phosphorylation2.64E-02
199GO:0046688: response to copper ion2.64E-02
200GO:0070588: calcium ion transmembrane transport2.64E-02
201GO:0009744: response to sucrose2.73E-02
202GO:0009408: response to heat2.87E-02
203GO:0009414: response to water deprivation2.96E-02
204GO:0080147: root hair cell development3.07E-02
205GO:0009636: response to toxic substance3.07E-02
206GO:0009863: salicylic acid mediated signaling pathway3.07E-02
207GO:2000377: regulation of reactive oxygen species metabolic process3.07E-02
208GO:0009753: response to jasmonic acid3.18E-02
209GO:0006825: copper ion transport3.29E-02
210GO:0009695: jasmonic acid biosynthetic process3.29E-02
211GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.30E-02
212GO:0006812: cation transport3.43E-02
213GO:0009269: response to desiccation3.52E-02
214GO:0051321: meiotic cell cycle3.52E-02
215GO:0003333: amino acid transmembrane transport3.52E-02
216GO:0016998: cell wall macromolecule catabolic process3.52E-02
217GO:0009809: lignin biosynthetic process3.68E-02
218GO:0006486: protein glycosylation3.68E-02
219GO:0009814: defense response, incompatible interaction3.75E-02
220GO:0010227: floral organ abscission3.99E-02
221GO:0009909: regulation of flower development4.07E-02
222GO:0009873: ethylene-activated signaling pathway4.16E-02
223GO:0009561: megagametogenesis4.24E-02
224GO:0009306: protein secretion4.24E-02
225GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.49E-02
226GO:0006970: response to osmotic stress4.53E-02
227GO:0042631: cellular response to water deprivation4.74E-02
228GO:0007275: multicellular organism development4.80E-02
229GO:0006885: regulation of pH5.00E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0005522: profilin binding0.00E+00
4GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
5GO:0004107: chorismate synthase activity0.00E+00
6GO:2001080: chitosan binding0.00E+00
7GO:0005212: structural constituent of eye lens0.00E+00
8GO:0016301: kinase activity7.05E-09
9GO:0004674: protein serine/threonine kinase activity5.62E-08
10GO:0005524: ATP binding1.11E-06
11GO:0005515: protein binding1.30E-04
12GO:0050373: UDP-arabinose 4-epimerase activity1.64E-04
13GO:0019199: transmembrane receptor protein kinase activity1.64E-04
14GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.09E-04
15GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.50E-04
16GO:0005509: calcium ion binding4.47E-04
17GO:0004012: phospholipid-translocating ATPase activity4.68E-04
18GO:0003978: UDP-glucose 4-epimerase activity4.68E-04
19GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.54E-04
20GO:1901149: salicylic acid binding5.54E-04
21GO:0090422: thiamine pyrophosphate transporter activity5.54E-04
22GO:0004662: CAAX-protein geranylgeranyltransferase activity5.54E-04
23GO:0008446: GDP-mannose 4,6-dehydratase activity5.54E-04
24GO:0046481: digalactosyldiacylglycerol synthase activity5.54E-04
25GO:0010285: L,L-diaminopimelate aminotransferase activity5.54E-04
26GO:0004672: protein kinase activity6.17E-04
27GO:0019901: protein kinase binding1.13E-03
28GO:0050291: sphingosine N-acyltransferase activity1.19E-03
29GO:0047364: desulfoglucosinolate sulfotransferase activity1.19E-03
30GO:0015152: glucose-6-phosphate transmembrane transporter activity1.19E-03
31GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.19E-03
32GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.19E-03
33GO:0001671: ATPase activator activity1.19E-03
34GO:0008728: GTP diphosphokinase activity1.19E-03
35GO:0048531: beta-1,3-galactosyltransferase activity1.19E-03
36GO:0004568: chitinase activity1.49E-03
37GO:0004713: protein tyrosine kinase activity1.49E-03
38GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.70E-03
39GO:0008559: xenobiotic-transporting ATPase activity1.73E-03
40GO:0071917: triose-phosphate transmembrane transporter activity1.96E-03
41GO:0016531: copper chaperone activity1.96E-03
42GO:0046423: allene-oxide cyclase activity1.96E-03
43GO:0005525: GTP binding2.73E-03
44GO:0015189: L-lysine transmembrane transporter activity2.84E-03
45GO:0017089: glycolipid transporter activity2.84E-03
46GO:0019201: nucleotide kinase activity2.84E-03
47GO:0035250: UDP-galactosyltransferase activity2.84E-03
48GO:0015181: arginine transmembrane transporter activity2.84E-03
49GO:0004190: aspartic-type endopeptidase activity2.85E-03
50GO:0030552: cAMP binding2.85E-03
51GO:0030553: cGMP binding2.85E-03
52GO:0015238: drug transmembrane transporter activity2.96E-03
53GO:0051861: glycolipid binding3.83E-03
54GO:0005313: L-glutamate transmembrane transporter activity3.83E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity3.83E-03
56GO:0043424: protein histidine kinase binding3.90E-03
57GO:0005216: ion channel activity3.90E-03
58GO:0033612: receptor serine/threonine kinase binding4.30E-03
59GO:0004356: glutamate-ammonia ligase activity4.91E-03
60GO:0045431: flavonol synthase activity4.91E-03
61GO:0005471: ATP:ADP antiporter activity4.91E-03
62GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.36E-03
63GO:0015297: antiporter activity5.55E-03
64GO:1990714: hydroxyproline O-galactosyltransferase activity6.09E-03
65GO:0035252: UDP-xylosyltransferase activity6.09E-03
66GO:0005516: calmodulin binding6.37E-03
67GO:0005249: voltage-gated potassium channel activity6.56E-03
68GO:0030551: cyclic nucleotide binding6.56E-03
69GO:0004722: protein serine/threonine phosphatase activity7.20E-03
70GO:0004017: adenylate kinase activity7.36E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity7.36E-03
72GO:0004723: calcium-dependent protein serine/threonine phosphatase activity7.36E-03
73GO:0042626: ATPase activity, coupled to transmembrane movement of substances8.59E-03
74GO:0031625: ubiquitin protein ligase binding8.71E-03
75GO:0043295: glutathione binding8.71E-03
76GO:0004714: transmembrane receptor protein tyrosine kinase activity1.01E-02
77GO:0052747: sinapyl alcohol dehydrogenase activity1.01E-02
78GO:0004708: MAP kinase kinase activity1.01E-02
79GO:0008271: secondary active sulfate transmembrane transporter activity1.17E-02
80GO:0004430: 1-phosphatidylinositol 4-kinase activity1.17E-02
81GO:0071949: FAD binding1.33E-02
82GO:0043531: ADP binding1.33E-02
83GO:0008375: acetylglucosaminyltransferase activity1.42E-02
84GO:0009931: calcium-dependent protein serine/threonine kinase activity1.42E-02
85GO:0015112: nitrate transmembrane transporter activity1.49E-02
86GO:0015174: basic amino acid transmembrane transporter activity1.49E-02
87GO:0004683: calmodulin-dependent protein kinase activity1.50E-02
88GO:0004806: triglyceride lipase activity1.50E-02
89GO:0005545: 1-phosphatidylinositol binding1.67E-02
90GO:0008047: enzyme activator activity1.67E-02
91GO:0015020: glucuronosyltransferase activity1.67E-02
92GO:0005543: phospholipid binding1.85E-02
93GO:0015116: sulfate transmembrane transporter activity2.04E-02
94GO:0008378: galactosyltransferase activity2.04E-02
95GO:0045551: cinnamyl-alcohol dehydrogenase activity2.04E-02
96GO:0043565: sequence-specific DNA binding2.22E-02
97GO:0031072: heat shock protein binding2.23E-02
98GO:0005388: calcium-transporting ATPase activity2.23E-02
99GO:0005315: inorganic phosphate transmembrane transporter activity2.23E-02
100GO:0004842: ubiquitin-protein transferase activity2.37E-02
101GO:0004364: glutathione transferase activity2.62E-02
102GO:0008061: chitin binding2.64E-02
103GO:0008146: sulfotransferase activity2.64E-02
104GO:0031418: L-ascorbic acid binding3.07E-02
105GO:0003954: NADH dehydrogenase activity3.07E-02
106GO:0051087: chaperone binding3.29E-02
107GO:0008324: cation transmembrane transporter activity3.29E-02
108GO:0019706: protein-cysteine S-palmitoyltransferase activity3.52E-02
109GO:0004707: MAP kinase activity3.52E-02
110GO:0005215: transporter activity3.72E-02
111GO:0016298: lipase activity3.80E-02
112GO:0000287: magnesium ion binding4.04E-02
113GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.48E-02
114GO:0005451: monovalent cation:proton antiporter activity4.74E-02
115GO:0046873: metal ion transmembrane transporter activity5.00E-02
116GO:0030276: clathrin binding5.00E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.94E-12
2GO:0005901: caveola1.34E-05
3GO:0016021: integral component of membrane5.37E-05
4GO:0005758: mitochondrial intermembrane space3.89E-04
5GO:0005911: cell-cell junction5.54E-04
6GO:0005953: CAAX-protein geranylgeranyltransferase complex5.54E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane1.19E-03
8GO:0000145: exocyst1.34E-03
9GO:0008287: protein serine/threonine phosphatase complex1.96E-03
10GO:0030139: endocytic vesicle1.96E-03
11GO:0070062: extracellular exosome2.84E-03
12GO:0000813: ESCRT I complex4.91E-03
13GO:0000164: protein phosphatase type 1 complex4.91E-03
14GO:0000815: ESCRT III complex7.36E-03
15GO:0032580: Golgi cisterna membrane1.06E-02
16GO:0005740: mitochondrial envelope1.67E-02
17GO:0090404: pollen tube tip1.85E-02
18GO:0000325: plant-type vacuole1.93E-02
19GO:0005794: Golgi apparatus2.36E-02
20GO:0005795: Golgi stack2.64E-02
21GO:0005737: cytoplasm3.09E-02
22GO:0070469: respiratory chain3.29E-02
23GO:0005905: clathrin-coated pit3.52E-02
24GO:0005774: vacuolar membrane3.53E-02
25GO:0005887: integral component of plasma membrane4.47E-02
26GO:0030136: clathrin-coated vesicle4.49E-02
27GO:0005770: late endosome5.00E-02
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Gene type



Gene DE type