co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G51520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044154: histone H3-K14 acetylation	0.00E+00
2	GO:1901698: response to nitrogen compound	0.00E+00
3	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
4	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
5	GO:0043972: histone H3-K23 acetylation	0.00E+00
6	GO:0015739: sialic acid transport	0.00E+00
7	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
8	GO:0051171: regulation of nitrogen compound metabolic process	1.08E-04
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.08E-04
10	GO:1902265: abscisic acid homeostasis	1.08E-04
11	GO:0043971: histone H3-K18 acetylation	1.08E-04
12	GO:1901135: carbohydrate derivative metabolic process	1.08E-04
13	GO:0048657: anther wall tapetum cell differentiation	1.08E-04
14	GO:0048255: mRNA stabilization	2.52E-04
15	GO:0006435: threonyl-tRNA aminoacylation	2.52E-04
16	GO:0080005: photosystem stoichiometry adjustment	2.52E-04
17	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	2.52E-04
18	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.52E-04
19	GO:0031022: nuclear migration along microfilament	4.19E-04
20	GO:0006013: mannose metabolic process	4.19E-04
21	GO:0071705: nitrogen compound transport	4.19E-04
22	GO:0001578: microtubule bundle formation	4.19E-04
23	GO:0045493: xylan catabolic process	4.19E-04
24	GO:0010306: rhamnogalacturonan II biosynthetic process	6.01E-04
25	GO:0010255: glucose mediated signaling pathway	6.01E-04
26	GO:0006168: adenine salvage	6.01E-04
27	GO:0006166: purine ribonucleoside salvage	6.01E-04
28	GO:0048868: pollen tube development	7.01E-04
29	GO:0051322: anaphase	7.98E-04
30	GO:0071249: cellular response to nitrate	7.98E-04
31	GO:0006552: leucine catabolic process	7.98E-04
32	GO:0007020: microtubule nucleation	7.98E-04
33	GO:0015846: polyamine transport	7.98E-04
34	GO:0009902: chloroplast relocation	7.98E-04
35	GO:0046785: microtubule polymerization	1.01E-03
36	GO:0031365: N-terminal protein amino acid modification	1.01E-03
37	GO:0044209: AMP salvage	1.01E-03
38	GO:0010315: auxin efflux	1.23E-03
39	GO:0009903: chloroplast avoidance movement	1.47E-03
40	GO:0022904: respiratory electron transport chain	1.73E-03
41	GO:0048528: post-embryonic root development	1.73E-03
42	GO:0009834: plant-type secondary cell wall biogenesis	1.74E-03
43	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.00E-03
44	GO:0006353: DNA-templated transcription, termination	2.00E-03
45	GO:0009704: de-etiolation	2.00E-03
46	GO:0022900: electron transport chain	2.28E-03
47	GO:0009827: plant-type cell wall modification	2.28E-03
48	GO:0006997: nucleus organization	2.28E-03
49	GO:0044030: regulation of DNA methylation	2.28E-03
50	GO:0006002: fructose 6-phosphate metabolic process	2.28E-03
51	GO:0051707: response to other organism	2.56E-03
52	GO:0015780: nucleotide-sugar transport	2.57E-03
53	GO:0010380: regulation of chlorophyll biosynthetic process	2.88E-03
54	GO:0006415: translational termination	3.53E-03
55	GO:0009750: response to fructose	3.53E-03
56	GO:0015706: nitrate transport	3.87E-03
57	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.87E-03
58	GO:0030048: actin filament-based movement	4.23E-03
59	GO:0009740: gibberellic acid mediated signaling pathway	4.58E-03
60	GO:0080188: RNA-directed DNA methylation	4.96E-03
61	GO:0010167: response to nitrate	4.96E-03
62	GO:0000162: tryptophan biosynthetic process	5.35E-03
63	GO:0006863: purine nucleobase transport	5.35E-03
64	GO:0010187: negative regulation of seed germination	5.75E-03
65	GO:0043622: cortical microtubule organization	6.15E-03
66	GO:0010073: meristem maintenance	6.15E-03
67	GO:0080092: regulation of pollen tube growth	6.99E-03
68	GO:0009693: ethylene biosynthetic process	7.42E-03
69	GO:0010584: pollen exine formation	7.87E-03
70	GO:0006508: proteolysis	9.11E-03
71	GO:0045489: pectin biosynthetic process	9.26E-03
72	GO:0010268: brassinosteroid homeostasis	9.26E-03
73	GO:0009739: response to gibberellin	9.39E-03
74	GO:0009646: response to absence of light	9.74E-03
75	GO:0010468: regulation of gene expression	1.00E-02
76	GO:0009749: response to glucose	1.02E-02
77	GO:0009851: auxin biosynthetic process	1.02E-02
78	GO:0016132: brassinosteroid biosynthetic process	1.07E-02
79	GO:0007264: small GTPase mediated signal transduction	1.12E-02
80	GO:0016125: sterol metabolic process	1.23E-02
81	GO:0009826: unidimensional cell growth	1.25E-02
82	GO:0000910: cytokinesis	1.34E-02
83	GO:0016126: sterol biosynthetic process	1.39E-02
84	GO:0009911: positive regulation of flower development	1.39E-02
85	GO:0009860: pollen tube growth	1.40E-02
86	GO:0010029: regulation of seed germination	1.45E-02
87	GO:0010411: xyloglucan metabolic process	1.56E-02
88	GO:0030244: cellulose biosynthetic process	1.68E-02
89	GO:0008219: cell death	1.68E-02
90	GO:0046777: protein autophosphorylation	1.73E-02
91	GO:0009910: negative regulation of flower development	1.86E-02
92	GO:0009853: photorespiration	1.99E-02
93	GO:0009637: response to blue light	1.99E-02
94	GO:0071555: cell wall organization	2.25E-02
95	GO:0008283: cell proliferation	2.38E-02
96	GO:0009744: response to sucrose	2.38E-02
97	GO:0008643: carbohydrate transport	2.52E-02
98	GO:0051603: proteolysis involved in cellular protein catabolic process	3.02E-02
99	GO:0010224: response to UV-B	3.02E-02
100	GO:0006417: regulation of translation	3.17E-02
101	GO:0006096: glycolytic process	3.32E-02
102	GO:0009553: embryo sac development	3.70E-02
103	GO:0005975: carbohydrate metabolic process	3.77E-02
104	GO:0009738: abscisic acid-activated signaling pathway	4.09E-02
105	GO:0009416: response to light stimulus	4.23E-02
106	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0019808: polyamine binding	0.00E+00
5	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
6	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
7	GO:0048039: ubiquinone binding	0.00E+00
8	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
9	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
10	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
11	GO:0017091: AU-rich element binding	1.08E-04
12	GO:0097367: carbohydrate derivative binding	1.08E-04
13	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.08E-04
14	GO:0016972: thiol oxidase activity	1.08E-04
15	GO:0016971: flavin-linked sulfhydryl oxidase activity	2.52E-04
16	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.52E-04
17	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.52E-04
18	GO:0004829: threonine-tRNA ligase activity	2.52E-04
19	GO:0032549: ribonucleoside binding	4.19E-04
20	GO:0016805: dipeptidase activity	4.19E-04
21	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	4.19E-04
22	GO:0000254: C-4 methylsterol oxidase activity	6.01E-04
23	GO:0003999: adenine phosphoribosyltransferase activity	6.01E-04
24	GO:0010385: double-stranded methylated DNA binding	7.98E-04
25	GO:0009044: xylan 1,4-beta-xylosidase activity	7.98E-04
26	GO:0046556: alpha-L-arabinofuranosidase activity	7.98E-04
27	GO:0009927: histidine phosphotransfer kinase activity	1.47E-03
28	GO:0004559: alpha-mannosidase activity	1.47E-03
29	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.73E-03
30	GO:0008235: metalloexopeptidase activity	1.73E-03
31	GO:0003872: 6-phosphofructokinase activity	1.73E-03
32	GO:0019899: enzyme binding	1.73E-03
33	GO:0003747: translation release factor activity	2.57E-03
34	GO:0030246: carbohydrate binding	2.95E-03
35	GO:0015020: glucuronosyltransferase activity	3.20E-03
36	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.53E-03
37	GO:0008327: methyl-CpG binding	3.53E-03
38	GO:0001054: RNA polymerase I activity	3.53E-03
39	GO:0004177: aminopeptidase activity	3.53E-03
40	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.59E-03
41	GO:0005345: purine nucleobase transmembrane transporter activity	6.15E-03
42	GO:0004176: ATP-dependent peptidase activity	6.56E-03
43	GO:0004402: histone acetyltransferase activity	8.79E-03
44	GO:0008080: N-acetyltransferase activity	9.26E-03
45	GO:0001085: RNA polymerase II transcription factor binding	9.26E-03
46	GO:0016853: isomerase activity	9.74E-03
47	GO:0004518: nuclease activity	1.12E-02
48	GO:0008237: metallopeptidase activity	1.28E-02
49	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.31E-02
50	GO:0016413: O-acetyltransferase activity	1.34E-02
51	GO:0004806: triglyceride lipase activity	1.56E-02
52	GO:0004721: phosphoprotein phosphatase activity	1.56E-02
53	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.86E-02
54	GO:0042803: protein homodimerization activity	2.03E-02
55	GO:0042393: histone binding	2.18E-02
56	GO:0051539: 4 iron, 4 sulfur cluster binding	2.18E-02
57	GO:0004185: serine-type carboxypeptidase activity	2.38E-02
58	GO:0003924: GTPase activity	2.39E-02
59	GO:0043621: protein self-association	2.52E-02
60	GO:0051537: 2 iron, 2 sulfur cluster binding	2.52E-02
61	GO:0009055: electron carrier activity	2.56E-02
62	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.94E-02
63	GO:0046872: metal ion binding	3.10E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.55E-02
65	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.55E-02
66	GO:0022857: transmembrane transporter activity	3.63E-02
67	GO:0015035: protein disulfide oxidoreductase activity	3.86E-02
68	GO:0016758: transferase activity, transferring hexosyl groups	4.35E-02
69	GO:0019843: rRNA binding	4.44E-02
70	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.52E-02
71	GO:0004252: serine-type endopeptidase activity	4.78E-02
72	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
3	GO:0009507: chloroplast	5.27E-05
4	GO:0010370: perinucleolar chromocenter	1.08E-04
5	GO:0072686: mitotic spindle	1.01E-03
6	GO:0005945: 6-phosphofructokinase complex	1.01E-03
7	GO:0010005: cortical microtubule, transverse to long axis	1.47E-03
8	GO:0009505: plant-type cell wall	1.90E-03
9	GO:0031305: integral component of mitochondrial inner membrane	2.00E-03
10	GO:0005736: DNA-directed RNA polymerase I complex	2.57E-03
11	GO:0005720: nuclear heterochromatin	2.57E-03
12	GO:0055028: cortical microtubule	3.20E-03
13	GO:0005740: mitochondrial envelope	3.20E-03
14	GO:0016324: apical plasma membrane	3.20E-03
15	GO:0005802: trans-Golgi network	3.85E-03
16	GO:0005938: cell cortex	4.23E-03
17	GO:0009574: preprophase band	4.23E-03
18	GO:0005768: endosome	4.67E-03
19	GO:0045271: respiratory chain complex I	6.15E-03
20	GO:0031965: nuclear membrane	1.02E-02
21	GO:0005667: transcription factor complex	1.51E-02
22	GO:0009707: chloroplast outer membrane	1.68E-02
23	GO:0005622: intracellular	1.91E-02
24	GO:0005819: spindle	2.12E-02
25	GO:0005856: cytoskeleton	2.59E-02
26	GO:0031966: mitochondrial membrane	2.80E-02
27	GO:0005635: nuclear envelope	3.09E-02
28	GO:0009570: chloroplast stroma	3.31E-02
29	GO:0005747: mitochondrial respiratory chain complex I	3.39E-02
30	GO:0005789: endoplasmic reticulum membrane	3.80E-02
31	GO:0005623: cell	4.52E-02
32	GO:0009524: phragmoplast	4.61E-02