Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015690: aluminum cation transport0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0018063: cytochrome c-heme linkage0.00E+00
6GO:0010793: regulation of mRNA export from nucleus0.00E+00
7GO:0051553: flavone biosynthetic process0.00E+00
8GO:0010055: atrichoblast differentiation0.00E+00
9GO:1902001: fatty acid transmembrane transport0.00E+00
10GO:0042742: defense response to bacterium4.87E-06
11GO:0009636: response to toxic substance1.03E-05
12GO:0050832: defense response to fungus1.58E-05
13GO:0001676: long-chain fatty acid metabolic process2.04E-05
14GO:0006952: defense response5.85E-05
15GO:0009759: indole glucosinolate biosynthetic process8.74E-05
16GO:1900057: positive regulation of leaf senescence1.59E-04
17GO:0009751: response to salicylic acid1.69E-04
18GO:0009617: response to bacterium1.77E-04
19GO:0080173: male-female gamete recognition during double fertilization2.29E-04
20GO:0033306: phytol metabolic process2.29E-04
21GO:0009700: indole phytoalexin biosynthetic process2.29E-04
22GO:0010482: regulation of epidermal cell division2.29E-04
23GO:0010230: alternative respiration2.29E-04
24GO:0034214: protein hexamerization2.29E-04
25GO:1900384: regulation of flavonol biosynthetic process2.29E-04
26GO:0032107: regulation of response to nutrient levels2.29E-04
27GO:0010120: camalexin biosynthetic process2.51E-04
28GO:0009620: response to fungus3.01E-04
29GO:0010112: regulation of systemic acquired resistance3.04E-04
30GO:0009835: fruit ripening3.04E-04
31GO:0051607: defense response to virus3.54E-04
32GO:0019521: D-gluconate metabolic process5.10E-04
33GO:0015908: fatty acid transport5.10E-04
34GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.10E-04
35GO:0071668: plant-type cell wall assembly5.10E-04
36GO:0009838: abscission5.10E-04
37GO:0055088: lipid homeostasis5.10E-04
38GO:0050684: regulation of mRNA processing5.10E-04
39GO:0055114: oxidation-reduction process5.12E-04
40GO:0010311: lateral root formation5.72E-04
41GO:0009407: toxin catabolic process6.09E-04
42GO:0006979: response to oxidative stress6.87E-04
43GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process8.29E-04
44GO:0002230: positive regulation of defense response to virus by host8.29E-04
45GO:0032784: regulation of DNA-templated transcription, elongation8.29E-04
46GO:0071398: cellular response to fatty acid8.29E-04
47GO:0010366: negative regulation of ethylene biosynthetic process8.29E-04
48GO:0000162: tryptophan biosynthetic process8.89E-04
49GO:0051707: response to other organism9.94E-04
50GO:0051289: protein homotetramerization1.18E-03
51GO:1902290: positive regulation of defense response to oomycetes1.18E-03
52GO:0006020: inositol metabolic process1.18E-03
53GO:0070301: cellular response to hydrogen peroxide1.18E-03
54GO:0002239: response to oomycetes1.18E-03
55GO:0009693: ethylene biosynthetic process1.40E-03
56GO:0006012: galactose metabolic process1.40E-03
57GO:0006621: protein retention in ER lumen1.57E-03
58GO:0010600: regulation of auxin biosynthetic process1.57E-03
59GO:1901002: positive regulation of response to salt stress1.57E-03
60GO:0051567: histone H3-K9 methylation1.57E-03
61GO:0010188: response to microbial phytotoxin1.57E-03
62GO:1901141: regulation of lignin biosynthetic process1.57E-03
63GO:0048830: adventitious root development1.57E-03
64GO:0009164: nucleoside catabolic process2.01E-03
65GO:0046283: anthocyanin-containing compound metabolic process2.01E-03
66GO:0031365: N-terminal protein amino acid modification2.01E-03
67GO:0016094: polyprenol biosynthetic process2.01E-03
68GO:0006623: protein targeting to vacuole2.21E-03
69GO:0006891: intra-Golgi vesicle-mediated transport2.36E-03
70GO:0010256: endomembrane system organization2.48E-03
71GO:0009611: response to wounding2.48E-03
72GO:0042372: phylloquinone biosynthetic process2.97E-03
73GO:1900056: negative regulation of leaf senescence3.50E-03
74GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.50E-03
75GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.50E-03
76GO:0043090: amino acid import3.50E-03
77GO:0009627: systemic acquired resistance3.80E-03
78GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.06E-03
79GO:0030091: protein repair4.06E-03
80GO:0008152: metabolic process4.55E-03
81GO:0006997: nucleus organization4.65E-03
82GO:0010204: defense response signaling pathway, resistance gene-independent4.65E-03
83GO:0030968: endoplasmic reticulum unfolded protein response4.65E-03
84GO:0017004: cytochrome complex assembly4.65E-03
85GO:0010208: pollen wall assembly4.65E-03
86GO:0009813: flavonoid biosynthetic process4.66E-03
87GO:0007568: aging5.13E-03
88GO:0006098: pentose-phosphate shunt5.27E-03
89GO:0019432: triglyceride biosynthetic process5.27E-03
90GO:0046685: response to arsenic-containing substance5.27E-03
91GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.91E-03
92GO:1900426: positive regulation of defense response to bacterium5.91E-03
93GO:0019538: protein metabolic process6.58E-03
94GO:0009870: defense response signaling pathway, resistance gene-dependent6.58E-03
95GO:0006032: chitin catabolic process6.58E-03
96GO:0009641: shade avoidance6.58E-03
97GO:0006631: fatty acid metabolic process6.68E-03
98GO:0009682: induced systemic resistance7.28E-03
99GO:0052544: defense response by callose deposition in cell wall7.28E-03
100GO:0048765: root hair cell differentiation7.28E-03
101GO:0009684: indoleacetic acid biosynthetic process7.28E-03
102GO:0002213: defense response to insect8.00E-03
103GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.00E-03
104GO:0071365: cellular response to auxin stimulus8.00E-03
105GO:0031347: regulation of defense response8.78E-03
106GO:0006812: cation transport9.11E-03
107GO:0002237: response to molecule of bacterial origin9.52E-03
108GO:0006813: potassium ion transport9.78E-03
109GO:0007165: signal transduction1.01E-02
110GO:0042343: indole glucosinolate metabolic process1.03E-02
111GO:0009225: nucleotide-sugar metabolic process1.03E-02
112GO:0010200: response to chitin1.08E-02
113GO:0080147: root hair cell development1.20E-02
114GO:0015031: protein transport1.25E-02
115GO:0010026: trichome differentiation1.28E-02
116GO:0043622: cortical microtubule organization1.28E-02
117GO:0009695: jasmonic acid biosynthetic process1.28E-02
118GO:0051302: regulation of cell division1.28E-02
119GO:0006886: intracellular protein transport1.35E-02
120GO:0009269: response to desiccation1.37E-02
121GO:0016998: cell wall macromolecule catabolic process1.37E-02
122GO:0098542: defense response to other organism1.37E-02
123GO:0016226: iron-sulfur cluster assembly1.46E-02
124GO:0071456: cellular response to hypoxia1.46E-02
125GO:0009625: response to insect1.56E-02
126GO:0006629: lipid metabolic process1.70E-02
127GO:0042147: retrograde transport, endosome to Golgi1.75E-02
128GO:0070417: cellular response to cold1.75E-02
129GO:0008284: positive regulation of cell proliferation1.75E-02
130GO:0042391: regulation of membrane potential1.85E-02
131GO:0006885: regulation of pH1.95E-02
132GO:0006520: cellular amino acid metabolic process1.95E-02
133GO:0006662: glycerol ether metabolic process1.95E-02
134GO:0048868: pollen tube development1.95E-02
135GO:0046323: glucose import1.95E-02
136GO:0006814: sodium ion transport2.05E-02
137GO:0009646: response to absence of light2.05E-02
138GO:0009851: auxin biosynthetic process2.16E-02
139GO:0002229: defense response to oomycetes2.27E-02
140GO:0000302: response to reactive oxygen species2.27E-02
141GO:0010193: response to ozone2.27E-02
142GO:0006635: fatty acid beta-oxidation2.27E-02
143GO:0010150: leaf senescence2.42E-02
144GO:0006464: cellular protein modification process2.60E-02
145GO:0007166: cell surface receptor signaling pathway2.77E-02
146GO:0009615: response to virus2.94E-02
147GO:0009816: defense response to bacterium, incompatible interaction3.06E-02
148GO:0009817: defense response to fungus, incompatible interaction3.56E-02
149GO:0048527: lateral root development3.94E-02
150GO:0006865: amino acid transport4.08E-02
151GO:0034599: cellular response to oxidative stress4.34E-02
152GO:0006099: tricarboxylic acid cycle4.34E-02
153GO:0042542: response to hydrogen peroxide4.90E-02
154GO:0005975: carbohydrate metabolic process4.92E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0015575: mannitol transmembrane transporter activity0.00E+00
4GO:0015591: D-ribose transmembrane transporter activity0.00E+00
5GO:0015148: D-xylose transmembrane transporter activity0.00E+00
6GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
7GO:0015576: sorbitol transmembrane transporter activity0.00E+00
8GO:0033759: flavone synthase activity0.00E+00
9GO:0102391: decanoate--CoA ligase activity1.21E-04
10GO:0004467: long-chain fatty acid-CoA ligase activity1.59E-04
11GO:0004033: aldo-keto reductase (NADP) activity2.03E-04
12GO:0070401: NADP+ binding2.29E-04
13GO:0051669: fructan beta-fructosidase activity2.29E-04
14GO:0000386: second spliceosomal transesterification activity2.29E-04
15GO:0047940: glucuronokinase activity2.29E-04
16GO:0031219: levanase activity2.29E-04
17GO:0015168: glycerol transmembrane transporter activity2.29E-04
18GO:2001147: camalexin binding2.29E-04
19GO:0015245: fatty acid transporter activity2.29E-04
20GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.29E-04
21GO:0090353: polygalacturonase inhibitor activity2.29E-04
22GO:0016229: steroid dehydrogenase activity2.29E-04
23GO:2001227: quercitrin binding2.29E-04
24GO:0004806: triglyceride lipase activity4.72E-04
25GO:0050736: O-malonyltransferase activity5.10E-04
26GO:0043169: cation binding8.29E-04
27GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.29E-04
28GO:0004049: anthranilate synthase activity8.29E-04
29GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity8.29E-04
30GO:0004364: glutathione transferase activity9.46E-04
31GO:0005354: galactose transmembrane transporter activity1.18E-03
32GO:0005432: calcium:sodium antiporter activity1.18E-03
33GO:0008106: alcohol dehydrogenase (NADP+) activity1.18E-03
34GO:0010178: IAA-amino acid conjugate hydrolase activity1.18E-03
35GO:0016301: kinase activity1.34E-03
36GO:0046923: ER retention sequence binding1.57E-03
37GO:0003995: acyl-CoA dehydrogenase activity1.57E-03
38GO:0050378: UDP-glucuronate 4-epimerase activity1.57E-03
39GO:0009916: alternative oxidase activity1.57E-03
40GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.57E-03
41GO:0015145: monosaccharide transmembrane transporter activity2.01E-03
42GO:0016773: phosphotransferase activity, alcohol group as acceptor2.01E-03
43GO:0002094: polyprenyltransferase activity2.01E-03
44GO:0003997: acyl-CoA oxidase activity2.01E-03
45GO:0008200: ion channel inhibitor activity2.48E-03
46GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.97E-03
47GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides2.97E-03
48GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.97E-03
49GO:0003978: UDP-glucose 4-epimerase activity2.97E-03
50GO:0004144: diacylglycerol O-acyltransferase activity2.97E-03
51GO:0004656: procollagen-proline 4-dioxygenase activity2.97E-03
52GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.97E-03
53GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.21E-03
54GO:0008320: protein transmembrane transporter activity3.50E-03
55GO:0043295: glutathione binding3.50E-03
56GO:0008235: metalloexopeptidase activity3.50E-03
57GO:0102425: myricetin 3-O-glucosyltransferase activity3.50E-03
58GO:0102360: daphnetin 3-O-glucosyltransferase activity3.50E-03
59GO:0004034: aldose 1-epimerase activity4.06E-03
60GO:0047893: flavonol 3-O-glucosyltransferase activity4.06E-03
61GO:0015491: cation:cation antiporter activity4.06E-03
62GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.06E-03
63GO:0008194: UDP-glycosyltransferase activity5.20E-03
64GO:0071949: FAD binding5.27E-03
65GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity5.27E-03
66GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors5.62E-03
67GO:0047617: acyl-CoA hydrolase activity5.91E-03
68GO:0004568: chitinase activity6.58E-03
69GO:0004177: aminopeptidase activity7.28E-03
70GO:0031072: heat shock protein binding8.75E-03
71GO:0046872: metal ion binding9.06E-03
72GO:0008266: poly(U) RNA binding9.52E-03
73GO:0004497: monooxygenase activity1.03E-02
74GO:0030552: cAMP binding1.03E-02
75GO:0004867: serine-type endopeptidase inhibitor activity1.03E-02
76GO:0030553: cGMP binding1.03E-02
77GO:0016787: hydrolase activity1.06E-02
78GO:0001046: core promoter sequence-specific DNA binding1.20E-02
79GO:0051536: iron-sulfur cluster binding1.20E-02
80GO:0031418: L-ascorbic acid binding1.20E-02
81GO:0080043: quercetin 3-O-glucosyltransferase activity1.27E-02
82GO:0080044: quercetin 7-O-glucosyltransferase activity1.27E-02
83GO:0005216: ion channel activity1.28E-02
84GO:0035251: UDP-glucosyltransferase activity1.37E-02
85GO:0004871: signal transducer activity1.38E-02
86GO:0042803: protein homodimerization activity1.38E-02
87GO:0016746: transferase activity, transferring acyl groups1.44E-02
88GO:0015035: protein disulfide oxidoreductase activity1.44E-02
89GO:0019825: oxygen binding1.60E-02
90GO:0004499: N,N-dimethylaniline monooxygenase activity1.65E-02
91GO:0003727: single-stranded RNA binding1.65E-02
92GO:0016758: transferase activity, transferring hexosyl groups1.70E-02
93GO:0047134: protein-disulfide reductase activity1.75E-02
94GO:0020037: heme binding1.81E-02
95GO:0030551: cyclic nucleotide binding1.85E-02
96GO:0005451: monovalent cation:proton antiporter activity1.85E-02
97GO:0005249: voltage-gated potassium channel activity1.85E-02
98GO:0030170: pyridoxal phosphate binding1.94E-02
99GO:0015299: solute:proton antiporter activity2.05E-02
100GO:0005355: glucose transmembrane transporter activity2.05E-02
101GO:0010181: FMN binding2.05E-02
102GO:0050662: coenzyme binding2.05E-02
103GO:0004791: thioredoxin-disulfide reductase activity2.05E-02
104GO:0016853: isomerase activity2.05E-02
105GO:0004674: protein serine/threonine kinase activity2.10E-02
106GO:0004872: receptor activity2.16E-02
107GO:0015297: antiporter activity2.31E-02
108GO:0005509: calcium ion binding2.39E-02
109GO:0015385: sodium:proton antiporter activity2.48E-02
110GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.48E-02
111GO:0016791: phosphatase activity2.60E-02
112GO:0005506: iron ion binding2.63E-02
113GO:0008483: transaminase activity2.71E-02
114GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.71E-02
115GO:0008237: metallopeptidase activity2.71E-02
116GO:0051213: dioxygenase activity2.94E-02
117GO:0003824: catalytic activity3.09E-02
118GO:0004721: phosphoprotein phosphatase activity3.31E-02
119GO:0030247: polysaccharide binding3.31E-02
120GO:0004683: calmodulin-dependent protein kinase activity3.31E-02
121GO:0015238: drug transmembrane transporter activity3.68E-02
122GO:0050897: cobalt ion binding3.94E-02
123GO:0030145: manganese ion binding3.94E-02
124GO:0050660: flavin adenine dinucleotide binding4.32E-02
125GO:0008233: peptidase activity4.54E-02
126GO:0051539: 4 iron, 4 sulfur cluster binding4.62E-02
127GO:0050661: NADP binding4.62E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0045252: oxoglutarate dehydrogenase complex2.29E-04
3GO:0005794: Golgi apparatus3.06E-04
4GO:0005950: anthranilate synthase complex5.10E-04
5GO:0031965: nuclear membrane2.21E-03
6GO:0016021: integral component of membrane4.08E-03
7GO:0005802: trans-Golgi network5.46E-03
8GO:0046658: anchored component of plasma membrane6.44E-03
9GO:0017119: Golgi transport complex6.58E-03
10GO:0005768: endosome6.84E-03
11GO:0005795: Golgi stack1.03E-02
12GO:0005777: peroxisome1.16E-02
13GO:0070469: respiratory chain1.28E-02
14GO:0005886: plasma membrane1.45E-02
15GO:0005789: endoplasmic reticulum membrane1.71E-02
16GO:0005770: late endosome1.95E-02
17GO:0005737: cytoplasm2.06E-02
18GO:0009504: cell plate2.16E-02
19GO:0019898: extrinsic component of membrane2.16E-02
20GO:0005829: cytosol2.38E-02
21GO:0009705: plant-type vacuole membrane2.42E-02
22GO:0032580: Golgi cisterna membrane2.60E-02
23GO:0005788: endoplasmic reticulum lumen3.06E-02
24GO:0005618: cell wall3.40E-02
25GO:0009505: plant-type cell wall3.75E-02
<
Gene type



Gene DE type