Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018063: cytochrome c-heme linkage0.00E+00
2GO:0071985: multivesicular body sorting pathway0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:0016559: peroxisome fission5.25E-05
7GO:0051607: defense response to virus6.31E-05
8GO:0010230: alternative respiration9.50E-05
9GO:0010482: regulation of epidermal cell division9.50E-05
10GO:1900384: regulation of flavonol biosynthetic process9.50E-05
11GO:0032107: regulation of response to nutrient levels9.50E-05
12GO:0009617: response to bacterium1.52E-04
13GO:0051707: response to other organism2.07E-04
14GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine2.24E-04
15GO:0071668: plant-type cell wall assembly2.24E-04
16GO:0080151: positive regulation of salicylic acid mediated signaling pathway2.24E-04
17GO:0055088: lipid homeostasis2.24E-04
18GO:0015908: fatty acid transport2.24E-04
19GO:0002230: positive regulation of defense response to virus by host3.73E-04
20GO:0044375: regulation of peroxisome size3.73E-04
21GO:0072661: protein targeting to plasma membrane3.73E-04
22GO:0010366: negative regulation of ethylene biosynthetic process3.73E-04
23GO:1902290: positive regulation of defense response to oomycetes5.37E-04
24GO:0001676: long-chain fatty acid metabolic process5.37E-04
25GO:0006020: inositol metabolic process5.37E-04
26GO:0070301: cellular response to hydrogen peroxide5.37E-04
27GO:0051567: histone H3-K9 methylation7.14E-04
28GO:1901002: positive regulation of response to salt stress7.14E-04
29GO:0048830: adventitious root development7.14E-04
30GO:0006621: protein retention in ER lumen7.14E-04
31GO:0046283: anthocyanin-containing compound metabolic process9.02E-04
32GO:0031365: N-terminal protein amino acid modification9.02E-04
33GO:0042742: defense response to bacterium9.45E-04
34GO:0002238: response to molecule of fungal origin1.10E-03
35GO:0009759: indole glucosinolate biosynthetic process1.10E-03
36GO:0010256: endomembrane system organization1.10E-03
37GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.10E-03
38GO:0009627: systemic acquired resistance1.15E-03
39GO:1900057: positive regulation of leaf senescence1.54E-03
40GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.54E-03
41GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.54E-03
42GO:0043068: positive regulation of programmed cell death1.78E-03
43GO:0006605: protein targeting1.78E-03
44GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.78E-03
45GO:0006997: nucleus organization2.03E-03
46GO:0010204: defense response signaling pathway, resistance gene-independent2.03E-03
47GO:0017004: cytochrome complex assembly2.03E-03
48GO:0010208: pollen wall assembly2.03E-03
49GO:0051865: protein autoubiquitination2.29E-03
50GO:0010112: regulation of systemic acquired resistance2.29E-03
51GO:0016192: vesicle-mediated transport2.32E-03
52GO:0009636: response to toxic substance2.42E-03
53GO:1900426: positive regulation of defense response to bacterium2.56E-03
54GO:0009870: defense response signaling pathway, resistance gene-dependent2.85E-03
55GO:0009641: shade avoidance2.85E-03
56GO:0048765: root hair cell differentiation3.14E-03
57GO:0009684: indoleacetic acid biosynthetic process3.14E-03
58GO:0009682: induced systemic resistance3.14E-03
59GO:0052544: defense response by callose deposition in cell wall3.14E-03
60GO:0006890: retrograde vesicle-mediated transport, Golgi to ER3.44E-03
61GO:0000266: mitochondrial fission3.44E-03
62GO:0012501: programmed cell death3.44E-03
63GO:0010102: lateral root morphogenesis3.76E-03
64GO:0090351: seedling development4.41E-03
65GO:0007033: vacuole organization4.41E-03
66GO:0007031: peroxisome organization4.41E-03
67GO:0000162: tryptophan biosynthetic process4.75E-03
68GO:0080147: root hair cell development5.10E-03
69GO:0043622: cortical microtubule organization5.46E-03
70GO:0051302: regulation of cell division5.46E-03
71GO:0006874: cellular calcium ion homeostasis5.46E-03
72GO:0010026: trichome differentiation5.46E-03
73GO:0009269: response to desiccation5.83E-03
74GO:0015031: protein transport6.06E-03
75GO:0007005: mitochondrion organization6.20E-03
76GO:0071456: cellular response to hypoxia6.20E-03
77GO:0050832: defense response to fungus6.33E-03
78GO:0006012: galactose metabolic process6.58E-03
79GO:0010150: leaf senescence7.06E-03
80GO:0042147: retrograde transport, endosome to Golgi7.38E-03
81GO:0006520: cellular amino acid metabolic process8.21E-03
82GO:0048868: pollen tube development8.21E-03
83GO:0006814: sodium ion transport8.63E-03
84GO:0006623: protein targeting to vacuole9.06E-03
85GO:0010193: response to ozone9.51E-03
86GO:0000302: response to reactive oxygen species9.51E-03
87GO:0006891: intra-Golgi vesicle-mediated transport9.51E-03
88GO:0009615: response to virus1.23E-02
89GO:0009816: defense response to bacterium, incompatible interaction1.28E-02
90GO:0006906: vesicle fusion1.33E-02
91GO:0009817: defense response to fungus, incompatible interaction1.49E-02
92GO:0010311: lateral root formation1.54E-02
93GO:0009407: toxin catabolic process1.59E-02
94GO:0048527: lateral root development1.65E-02
95GO:0007568: aging1.65E-02
96GO:0006886: intracellular protein transport1.68E-02
97GO:0006099: tricarboxylic acid cycle1.81E-02
98GO:0009751: response to salicylic acid1.98E-02
99GO:0006887: exocytosis1.99E-02
100GO:0006631: fatty acid metabolic process1.99E-02
101GO:0010114: response to red light2.10E-02
102GO:0042546: cell wall biogenesis2.16E-02
103GO:0009965: leaf morphogenesis2.29E-02
104GO:0006812: cation transport2.47E-02
105GO:0006813: potassium ion transport2.60E-02
106GO:0009736: cytokinin-activated signaling pathway2.60E-02
107GO:0009909: regulation of flower development2.80E-02
108GO:0006417: regulation of translation2.80E-02
109GO:0009626: plant-type hypersensitive response3.07E-02
110GO:0009620: response to fungus3.14E-02
111GO:0009611: response to wounding3.64E-02
112GO:0009058: biosynthetic process4.07E-02
113GO:0006457: protein folding4.59E-02
114GO:0040008: regulation of growth4.77E-02
RankGO TermAdjusted P value
1GO:0030942: endoplasmic reticulum signal peptide binding9.50E-05
2GO:0032266: phosphatidylinositol-3-phosphate binding9.50E-05
3GO:0047940: glucuronokinase activity9.50E-05
4GO:0015245: fatty acid transporter activity9.50E-05
5GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity9.50E-05
6GO:0016229: steroid dehydrogenase activity9.50E-05
7GO:0070401: NADP+ binding9.50E-05
8GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity3.73E-04
9GO:0043169: cation binding3.73E-04
10GO:0005432: calcium:sodium antiporter activity5.37E-04
11GO:0008106: alcohol dehydrogenase (NADP+) activity5.37E-04
12GO:0035529: NADH pyrophosphatase activity5.37E-04
13GO:0046923: ER retention sequence binding7.14E-04
14GO:0016773: phosphotransferase activity, alcohol group as acceptor9.02E-04
15GO:0047631: ADP-ribose diphosphatase activity9.02E-04
16GO:0000210: NAD+ diphosphatase activity1.10E-03
17GO:0102391: decanoate--CoA ligase activity1.31E-03
18GO:0003978: UDP-glucose 4-epimerase activity1.31E-03
19GO:0004656: procollagen-proline 4-dioxygenase activity1.31E-03
20GO:0008320: protein transmembrane transporter activity1.54E-03
21GO:0004467: long-chain fatty acid-CoA ligase activity1.54E-03
22GO:0008235: metalloexopeptidase activity1.54E-03
23GO:0004033: aldo-keto reductase (NADP) activity1.78E-03
24GO:0015491: cation:cation antiporter activity1.78E-03
25GO:0008312: 7S RNA binding1.78E-03
26GO:0004177: aminopeptidase activity3.14E-03
27GO:0008266: poly(U) RNA binding4.08E-03
28GO:0016746: transferase activity, transferring acyl groups4.22E-03
29GO:0005217: intracellular ligand-gated ion channel activity4.41E-03
30GO:0004970: ionotropic glutamate receptor activity4.41E-03
31GO:0001046: core promoter sequence-specific DNA binding5.10E-03
32GO:0043130: ubiquitin binding5.10E-03
33GO:0004499: N,N-dimethylaniline monooxygenase activity6.98E-03
34GO:0004872: receptor activity9.06E-03
35GO:0008483: transaminase activity1.14E-02
36GO:0030247: polysaccharide binding1.38E-02
37GO:0004806: triglyceride lipase activity1.38E-02
38GO:0005509: calcium ion binding1.63E-02
39GO:0004871: signal transducer activity1.71E-02
40GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.76E-02
41GO:0000149: SNARE binding1.87E-02
42GO:0050661: NADP binding1.93E-02
43GO:0004364: glutathione transferase activity2.05E-02
44GO:0005484: SNAP receptor activity2.10E-02
45GO:0005198: structural molecule activity2.29E-02
46GO:0051287: NAD binding2.41E-02
47GO:0080043: quercetin 3-O-glucosyltransferase activity3.14E-02
48GO:0080044: quercetin 7-O-glucosyltransferase activity3.14E-02
49GO:0015035: protein disulfide oxidoreductase activity3.42E-02
50GO:0016758: transferase activity, transferring hexosyl groups3.85E-02
51GO:0030170: pyridoxal phosphate binding4.23E-02
52GO:0016787: hydrolase activity4.65E-02
53GO:0015297: antiporter activity4.77E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex9.50E-05
2GO:0016021: integral component of membrane1.56E-04
3GO:0000814: ESCRT II complex2.24E-04
4GO:0031965: nuclear membrane6.82E-04
5GO:0009504: cell plate6.82E-04
6GO:0005778: peroxisomal membrane9.27E-04
7GO:0005794: Golgi apparatus1.26E-03
8GO:0005789: endoplasmic reticulum membrane1.98E-03
9GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.03E-03
10GO:0005779: integral component of peroxisomal membrane2.03E-03
11GO:0031901: early endosome membrane2.29E-03
12GO:0017119: Golgi transport complex2.85E-03
13GO:0005768: endosome3.59E-03
14GO:0005769: early endosome4.75E-03
15GO:0005741: mitochondrial outer membrane5.83E-03
16GO:0009705: plant-type vacuole membrane7.06E-03
17GO:0005770: late endosome8.21E-03
18GO:0005777: peroxisome8.78E-03
19GO:0019898: extrinsic component of membrane9.06E-03
20GO:0046658: anchored component of plasma membrane9.35E-03
21GO:0005802: trans-Golgi network1.34E-02
22GO:0031201: SNARE complex1.99E-02
23GO:0000139: Golgi membrane2.64E-02
24GO:0005635: nuclear envelope2.73E-02
25GO:0005783: endoplasmic reticulum2.75E-02
26GO:0009706: chloroplast inner membrane3.34E-02
27GO:0005623: cell4.00E-02
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Gene type



Gene DE type