co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G49370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032491: detection of molecule of fungal origin	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
5	GO:0002764: immune response-regulating signaling pathway	0.00E+00
6	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
7	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:0010204: defense response signaling pathway, resistance gene-independent	1.02E-04
10	GO:0015969: guanosine tetraphosphate metabolic process	1.25E-04
11	GO:0019673: GDP-mannose metabolic process	1.25E-04
12	GO:0006562: proline catabolic process	1.25E-04
13	GO:0032469: endoplasmic reticulum calcium ion homeostasis	1.25E-04
14	GO:0010155: regulation of proton transport	2.90E-04
15	GO:0010133: proline catabolic process to glutamate	2.90E-04
16	GO:1902066: regulation of cell wall pectin metabolic process	2.90E-04
17	GO:0002240: response to molecule of oomycetes origin	2.90E-04
18	GO:0010115: regulation of abscisic acid biosynthetic process	2.90E-04
19	GO:0043066: negative regulation of apoptotic process	2.90E-04
20	GO:0015865: purine nucleotide transport	2.90E-04
21	GO:0010271: regulation of chlorophyll catabolic process	2.90E-04
22	GO:0019725: cellular homeostasis	2.90E-04
23	GO:0009266: response to temperature stimulus	3.14E-04
24	GO:0042742: defense response to bacterium	4.35E-04
25	GO:0009863: salicylic acid mediated signaling pathway	4.36E-04
26	GO:0045836: positive regulation of meiotic nuclear division	4.78E-04
27	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	4.78E-04
28	GO:0010498: proteasomal protein catabolic process	4.78E-04
29	GO:1901672: positive regulation of systemic acquired resistance	4.78E-04
30	GO:0048586: regulation of long-day photoperiodism, flowering	4.78E-04
31	GO:0032922: circadian regulation of gene expression	4.78E-04
32	GO:0016045: detection of bacterium	4.78E-04
33	GO:0010359: regulation of anion channel activity	4.78E-04
34	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.78E-04
35	GO:0031348: negative regulation of defense response	5.76E-04
36	GO:0006986: response to unfolded protein	6.85E-04
37	GO:0046902: regulation of mitochondrial membrane permeability	6.85E-04
38	GO:0010104: regulation of ethylene-activated signaling pathway	6.85E-04
39	GO:0072583: clathrin-dependent endocytosis	6.85E-04
40	GO:0006537: glutamate biosynthetic process	6.85E-04
41	GO:0010731: protein glutathionylation	6.85E-04
42	GO:0071323: cellular response to chitin	6.85E-04
43	GO:0060548: negative regulation of cell death	9.08E-04
44	GO:0071219: cellular response to molecule of bacterial origin	9.08E-04
45	GO:0009408: response to heat	1.08E-03
46	GO:0009435: NAD biosynthetic process	1.15E-03
47	GO:0018344: protein geranylgeranylation	1.15E-03
48	GO:0009247: glycolipid biosynthetic process	1.15E-03
49	GO:0045927: positive regulation of growth	1.15E-03
50	GO:0006904: vesicle docking involved in exocytosis	1.32E-03
51	GO:0002238: response to molecule of fungal origin	1.41E-03
52	GO:0009423: chorismate biosynthetic process	1.68E-03
53	GO:0031930: mitochondria-nucleus signaling pathway	1.68E-03
54	GO:0006470: protein dephosphorylation	1.82E-03
55	GO:0046470: phosphatidylcholine metabolic process	1.98E-03
56	GO:0045010: actin nucleation	2.29E-03
57	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.29E-03
58	GO:0006491: N-glycan processing	2.29E-03
59	GO:0019375: galactolipid biosynthetic process	2.29E-03
60	GO:0030968: endoplasmic reticulum unfolded protein response	2.61E-03
61	GO:0009932: cell tip growth	2.61E-03
62	GO:0006098: pentose-phosphate shunt	2.95E-03
63	GO:0006468: protein phosphorylation	3.14E-03
64	GO:0010380: regulation of chlorophyll biosynthetic process	3.31E-03
65	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.31E-03
66	GO:0010200: response to chitin	3.66E-03
67	GO:0046777: protein autophosphorylation	3.82E-03
68	GO:0016567: protein ubiquitination	3.94E-03
69	GO:0009089: lysine biosynthetic process via diaminopimelate	4.06E-03
70	GO:0009073: aromatic amino acid family biosynthetic process	4.06E-03
71	GO:0006486: protein glycosylation	4.20E-03
72	GO:2000028: regulation of photoperiodism, flowering	4.86E-03
73	GO:0018107: peptidyl-threonine phosphorylation	4.86E-03
74	GO:0055046: microgametogenesis	4.86E-03
75	GO:0006626: protein targeting to mitochondrion	4.86E-03
76	GO:0002237: response to molecule of bacterial origin	5.28E-03
77	GO:0009620: response to fungus	5.44E-03
78	GO:0009751: response to salicylic acid	5.65E-03
79	GO:0046854: phosphatidylinositol phosphorylation	5.71E-03
80	GO:0018105: peptidyl-serine phosphorylation	6.13E-03
81	GO:0034976: response to endoplasmic reticulum stress	6.15E-03
82	GO:0006487: protein N-linked glycosylation	6.61E-03
83	GO:0080147: root hair cell development	6.61E-03
84	GO:0009737: response to abscisic acid	6.91E-03
85	GO:0051321: meiotic cell cycle	7.56E-03
86	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.05E-03
87	GO:0016310: phosphorylation	8.83E-03
88	GO:0009306: protein secretion	9.07E-03
89	GO:0009561: megagametogenesis	9.07E-03
90	GO:0010150: leaf senescence	1.03E-02
91	GO:0006885: regulation of pH	1.07E-02
92	GO:0035556: intracellular signal transduction	1.28E-02
93	GO:0016579: protein deubiquitination	1.54E-02
94	GO:0009615: response to virus	1.61E-02
95	GO:0055085: transmembrane transport	1.61E-02
96	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.67E-02
97	GO:0006970: response to osmotic stress	1.72E-02
98	GO:0009817: defense response to fungus, incompatible interaction	1.94E-02
99	GO:0010043: response to zinc ion	2.15E-02
100	GO:0007568: aging	2.15E-02
101	GO:0009631: cold acclimation	2.15E-02
102	GO:0010119: regulation of stomatal movement	2.15E-02
103	GO:0007165: signal transduction	2.26E-02
104	GO:0009867: jasmonic acid mediated signaling pathway	2.30E-02
105	GO:0045087: innate immune response	2.30E-02
106	GO:0006839: mitochondrial transport	2.52E-02
107	GO:0006887: exocytosis	2.60E-02
108	GO:0051707: response to other organism	2.75E-02
109	GO:0009414: response to water deprivation	2.82E-02
110	GO:0000209: protein polyubiquitination	2.83E-02
111	GO:0048364: root development	3.06E-02
112	GO:0006855: drug transmembrane transport	3.07E-02
113	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.15E-02
114	GO:0042538: hyperosmotic salinity response	3.24E-02
115	GO:0006812: cation transport	3.24E-02
116	GO:0009809: lignin biosynthetic process	3.40E-02
117	GO:0006813: potassium ion transport	3.40E-02
118	GO:0006952: defense response	3.53E-02
119	GO:0009626: plant-type hypersensitive response	4.01E-02
120	GO:0051726: regulation of cell cycle	4.56E-02
121	GO:0006810: transport	4.66E-02
122	GO:0009738: abscisic acid-activated signaling pathway	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0008734: L-aspartate oxidase activity	0.00E+00
5	GO:0005522: profilin binding	0.00E+00
6	GO:0004107: chorismate synthase activity	0.00E+00
7	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.03E-07
8	GO:0016301: kinase activity	9.89E-06
9	GO:0019199: transmembrane receptor protein kinase activity	1.33E-05
10	GO:0046481: digalactosyldiacylglycerol synthase activity	1.25E-04
11	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.25E-04
12	GO:0032050: clathrin heavy chain binding	1.25E-04
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.25E-04
14	GO:0004662: CAAX-protein geranylgeranyltransferase activity	1.25E-04
15	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.25E-04
16	GO:0004657: proline dehydrogenase activity	1.25E-04
17	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.77E-04
18	GO:0048531: beta-1,3-galactosyltransferase activity	2.90E-04
19	GO:0008728: GTP diphosphokinase activity	2.90E-04
20	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	6.85E-04
21	GO:0035250: UDP-galactosyltransferase activity	6.85E-04
22	GO:0004842: ubiquitin-protein transferase activity	8.34E-04
23	GO:0005471: ATP:ADP antiporter activity	1.15E-03
24	GO:0004040: amidase activity	1.15E-03
25	GO:0008375: acetylglucosaminyltransferase activity	1.65E-03
26	GO:0004656: procollagen-proline 4-dioxygenase activity	1.68E-03
27	GO:0004559: alpha-mannosidase activity	1.68E-03
28	GO:0004012: phospholipid-translocating ATPase activity	1.68E-03
29	GO:0005524: ATP binding	1.68E-03
30	GO:0004630: phospholipase D activity	2.61E-03
31	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.61E-03
32	GO:0004430: 1-phosphatidylinositol 4-kinase activity	2.61E-03
33	GO:0071949: FAD binding	2.95E-03
34	GO:0004674: protein serine/threonine kinase activity	3.34E-03
35	GO:0008559: xenobiotic-transporting ATPase activity	4.06E-03
36	GO:0005543: phospholipid binding	4.06E-03
37	GO:0031072: heat shock protein binding	4.86E-03
38	GO:0005262: calcium channel activity	4.86E-03
39	GO:0004722: protein serine/threonine phosphatase activity	4.96E-03
40	GO:0008061: chitin binding	5.71E-03
41	GO:0031418: L-ascorbic acid binding	6.61E-03
42	GO:0005509: calcium ion binding	6.63E-03
43	GO:0051087: chaperone binding	7.08E-03
44	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.56E-03
45	GO:0033612: receptor serine/threonine kinase binding	7.56E-03
46	GO:0005451: monovalent cation:proton antiporter activity	1.01E-02
47	GO:0015299: solute:proton antiporter activity	1.12E-02
48	GO:0010181: FMN binding	1.12E-02
49	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.24E-02
50	GO:0015385: sodium:proton antiporter activity	1.36E-02
51	GO:0051015: actin filament binding	1.36E-02
52	GO:0008483: transaminase activity	1.48E-02
53	GO:0000287: magnesium ion binding	1.57E-02
54	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.74E-02
55	GO:0004683: calmodulin-dependent protein kinase activity	1.81E-02
56	GO:0005515: protein binding	1.94E-02
57	GO:0015238: drug transmembrane transporter activity	2.01E-02
58	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.30E-02
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.45E-02
60	GO:0005198: structural molecule activity	2.99E-02
61	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.92E-02
62	GO:0016874: ligase activity	4.19E-02
63	GO:0003779: actin binding	4.28E-02
64	GO:0051082: unfolded protein binding	4.37E-02
65	GO:0015035: protein disulfide oxidoreductase activity	4.47E-02
66	GO:0016757: transferase activity, transferring glycosyl groups	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	1.25E-04
2	GO:0005953: CAAX-protein geranylgeranyltransferase complex	1.25E-04
3	GO:0005886: plasma membrane	1.33E-03
4	GO:0016021: integral component of membrane	2.00E-03
5	GO:0005740: mitochondrial envelope	3.68E-03
6	GO:0030125: clathrin vesicle coat	3.68E-03
7	GO:0048471: perinuclear region of cytoplasm	4.06E-03
8	GO:0005635: nuclear envelope	4.49E-03
9	GO:0005795: Golgi stack	5.71E-03
10	GO:0030176: integral component of endoplasmic reticulum membrane	5.71E-03
11	GO:0005654: nucleoplasm	7.26E-03
12	GO:0005794: Golgi apparatus	9.17E-03
13	GO:0005770: late endosome	1.07E-02
14	GO:0000145: exocyst	1.30E-02
15	GO:0005789: endoplasmic reticulum membrane	1.42E-02
16	GO:0009707: chloroplast outer membrane	1.94E-02
17	GO:0005783: endoplasmic reticulum	1.97E-02
18	GO:0000325: plant-type vacuole	2.15E-02
19	GO:0031902: late endosome membrane	2.60E-02
20	GO:0005743: mitochondrial inner membrane	2.73E-02
21	GO:0090406: pollen tube	2.75E-02
22	GO:0005834: heterotrimeric G-protein complex	4.01E-02
23	GO:0000139: Golgi membrane	4.22E-02
24	GO:0012505: endomembrane system	4.28E-02