GO Enrichment Analysis of Co-expressed Genes with
AT3G49120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006858: extracellular transport | 0.00E+00 |
| 2 | GO:0048034: heme O biosynthetic process | 0.00E+00 |
| 3 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 4 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 5 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.77E-05 |
| 6 | GO:0006102: isocitrate metabolic process | 4.50E-05 |
| 7 | GO:0010120: camalexin biosynthetic process | 5.72E-05 |
| 8 | GO:0009821: alkaloid biosynthetic process | 7.10E-05 |
| 9 | GO:0019628: urate catabolic process | 8.61E-05 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 8.61E-05 |
| 11 | GO:0006144: purine nucleobase metabolic process | 8.61E-05 |
| 12 | GO:0006099: tricarboxylic acid cycle | 1.28E-04 |
| 13 | GO:0046939: nucleotide phosphorylation | 2.04E-04 |
| 14 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.04E-04 |
| 15 | GO:0043132: NAD transport | 2.04E-04 |
| 16 | GO:0006996: organelle organization | 2.04E-04 |
| 17 | GO:0055074: calcium ion homeostasis | 3.42E-04 |
| 18 | GO:0010359: regulation of anion channel activity | 3.42E-04 |
| 19 | GO:0044375: regulation of peroxisome size | 3.42E-04 |
| 20 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.51E-04 |
| 21 | GO:0015858: nucleoside transport | 4.92E-04 |
| 22 | GO:0001676: long-chain fatty acid metabolic process | 4.92E-04 |
| 23 | GO:0009058: biosynthetic process | 5.87E-04 |
| 24 | GO:0018279: protein N-linked glycosylation via asparagine | 8.29E-04 |
| 25 | GO:0046283: anthocyanin-containing compound metabolic process | 8.29E-04 |
| 26 | GO:0006564: L-serine biosynthetic process | 8.29E-04 |
| 27 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 8.29E-04 |
| 28 | GO:0006461: protein complex assembly | 8.29E-04 |
| 29 | GO:0009615: response to virus | 9.13E-04 |
| 30 | GO:0009228: thiamine biosynthetic process | 1.01E-03 |
| 31 | GO:0006561: proline biosynthetic process | 1.01E-03 |
| 32 | GO:0006499: N-terminal protein myristoylation | 1.29E-03 |
| 33 | GO:1900056: negative regulation of leaf senescence | 1.41E-03 |
| 34 | GO:0000338: protein deneddylation | 1.41E-03 |
| 35 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.63E-03 |
| 36 | GO:0006402: mRNA catabolic process | 1.63E-03 |
| 37 | GO:0006972: hyperosmotic response | 1.86E-03 |
| 38 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.86E-03 |
| 39 | GO:0006783: heme biosynthetic process | 2.10E-03 |
| 40 | GO:0009664: plant-type cell wall organization | 2.37E-03 |
| 41 | GO:0009688: abscisic acid biosynthetic process | 2.61E-03 |
| 42 | GO:0043069: negative regulation of programmed cell death | 2.61E-03 |
| 43 | GO:0009682: induced systemic resistance | 2.87E-03 |
| 44 | GO:0006096: glycolytic process | 2.99E-03 |
| 45 | GO:0006790: sulfur compound metabolic process | 3.15E-03 |
| 46 | GO:0002213: defense response to insect | 3.15E-03 |
| 47 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.15E-03 |
| 48 | GO:0009620: response to fungus | 3.28E-03 |
| 49 | GO:0006829: zinc II ion transport | 3.43E-03 |
| 50 | GO:0006807: nitrogen compound metabolic process | 3.43E-03 |
| 51 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.43E-03 |
| 52 | GO:0034605: cellular response to heat | 3.73E-03 |
| 53 | GO:0055114: oxidation-reduction process | 3.75E-03 |
| 54 | GO:0007031: peroxisome organization | 4.03E-03 |
| 55 | GO:0046854: phosphatidylinositol phosphorylation | 4.03E-03 |
| 56 | GO:0045333: cellular respiration | 4.65E-03 |
| 57 | GO:0005992: trehalose biosynthetic process | 4.65E-03 |
| 58 | GO:0015031: protein transport | 4.94E-03 |
| 59 | GO:0042744: hydrogen peroxide catabolic process | 5.10E-03 |
| 60 | GO:0015992: proton transport | 5.32E-03 |
| 61 | GO:0010150: leaf senescence | 6.18E-03 |
| 62 | GO:0010089: xylem development | 6.36E-03 |
| 63 | GO:0009561: megagametogenesis | 6.36E-03 |
| 64 | GO:0009306: protein secretion | 6.36E-03 |
| 65 | GO:0009611: response to wounding | 6.39E-03 |
| 66 | GO:0051028: mRNA transport | 6.73E-03 |
| 67 | GO:0046686: response to cadmium ion | 6.73E-03 |
| 68 | GO:0010118: stomatal movement | 7.10E-03 |
| 69 | GO:0009646: response to absence of light | 7.87E-03 |
| 70 | GO:0009851: auxin biosynthetic process | 8.26E-03 |
| 71 | GO:0055085: transmembrane transport | 8.42E-03 |
| 72 | GO:0010193: response to ozone | 8.66E-03 |
| 73 | GO:0031047: gene silencing by RNA | 9.07E-03 |
| 74 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.18E-03 |
| 75 | GO:1901657: glycosyl compound metabolic process | 9.48E-03 |
| 76 | GO:0019760: glucosinolate metabolic process | 9.91E-03 |
| 77 | GO:0010252: auxin homeostasis | 9.91E-03 |
| 78 | GO:0006464: cellular protein modification process | 9.91E-03 |
| 79 | GO:0006914: autophagy | 9.91E-03 |
| 80 | GO:0009723: response to ethylene | 1.11E-02 |
| 81 | GO:0010311: lateral root formation | 1.40E-02 |
| 82 | GO:0007568: aging | 1.50E-02 |
| 83 | GO:0010119: regulation of stomatal movement | 1.50E-02 |
| 84 | GO:0042742: defense response to bacterium | 1.52E-02 |
| 85 | GO:0009751: response to salicylic acid | 1.73E-02 |
| 86 | GO:0006839: mitochondrial transport | 1.76E-02 |
| 87 | GO:0030001: metal ion transport | 1.76E-02 |
| 88 | GO:0006897: endocytosis | 1.81E-02 |
| 89 | GO:0006631: fatty acid metabolic process | 1.81E-02 |
| 90 | GO:0006397: mRNA processing | 1.83E-02 |
| 91 | GO:0009753: response to jasmonic acid | 1.89E-02 |
| 92 | GO:0009640: photomorphogenesis | 1.92E-02 |
| 93 | GO:0009926: auxin polar transport | 1.92E-02 |
| 94 | GO:0009651: response to salt stress | 2.13E-02 |
| 95 | GO:0006855: drug transmembrane transport | 2.14E-02 |
| 96 | GO:0031347: regulation of defense response | 2.19E-02 |
| 97 | GO:0042538: hyperosmotic salinity response | 2.25E-02 |
| 98 | GO:0009809: lignin biosynthetic process | 2.37E-02 |
| 99 | GO:0009585: red, far-red light phototransduction | 2.37E-02 |
| 100 | GO:0009626: plant-type hypersensitive response | 2.79E-02 |
| 101 | GO:0009624: response to nematode | 3.04E-02 |
| 102 | GO:0018105: peptidyl-serine phosphorylation | 3.11E-02 |
| 103 | GO:0006952: defense response | 4.44E-02 |
| 104 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.86E-02 |
| 105 | GO:0009739: response to gibberellin | 4.86E-02 |
| 106 | GO:0007166: cell surface receptor signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0008495: protoheme IX farnesyltransferase activity | 0.00E+00 |
| 6 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.65E-06 |
| 7 | GO:0036402: proteasome-activating ATPase activity | 1.77E-05 |
| 8 | GO:0010013: N-1-naphthylphthalamic acid binding | 8.61E-05 |
| 9 | GO:0019786: Atg8-specific protease activity | 8.61E-05 |
| 10 | GO:0048037: cofactor binding | 8.61E-05 |
| 11 | GO:0015230: FAD transmembrane transporter activity | 8.61E-05 |
| 12 | GO:0004743: pyruvate kinase activity | 8.63E-05 |
| 13 | GO:0030955: potassium ion binding | 8.63E-05 |
| 14 | GO:0016844: strictosidine synthase activity | 8.63E-05 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.04E-04 |
| 16 | GO:0051724: NAD transporter activity | 2.04E-04 |
| 17 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.04E-04 |
| 18 | GO:0019779: Atg8 activating enzyme activity | 2.04E-04 |
| 19 | GO:0019172: glyoxalase III activity | 2.04E-04 |
| 20 | GO:0008517: folic acid transporter activity | 2.04E-04 |
| 21 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.04E-04 |
| 22 | GO:0004566: beta-glucuronidase activity | 2.04E-04 |
| 23 | GO:0015228: coenzyme A transmembrane transporter activity | 2.04E-04 |
| 24 | GO:0017025: TBP-class protein binding | 2.10E-04 |
| 25 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.42E-04 |
| 26 | GO:0019201: nucleotide kinase activity | 4.92E-04 |
| 27 | GO:0004031: aldehyde oxidase activity | 6.55E-04 |
| 28 | GO:0050302: indole-3-acetaldehyde oxidase activity | 6.55E-04 |
| 29 | GO:0019776: Atg8 ligase activity | 6.55E-04 |
| 30 | GO:0010279: indole-3-acetic acid amido synthetase activity | 6.55E-04 |
| 31 | GO:0004659: prenyltransferase activity | 6.55E-04 |
| 32 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 8.29E-04 |
| 33 | GO:0080122: AMP transmembrane transporter activity | 8.29E-04 |
| 34 | GO:0031593: polyubiquitin binding | 1.01E-03 |
| 35 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.01E-03 |
| 36 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.01E-03 |
| 37 | GO:0005524: ATP binding | 1.07E-03 |
| 38 | GO:0015217: ADP transmembrane transporter activity | 1.20E-03 |
| 39 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.20E-03 |
| 40 | GO:0102391: decanoate--CoA ligase activity | 1.20E-03 |
| 41 | GO:0004017: adenylate kinase activity | 1.20E-03 |
| 42 | GO:0005347: ATP transmembrane transporter activity | 1.20E-03 |
| 43 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.20E-03 |
| 44 | GO:0000287: magnesium ion binding | 1.37E-03 |
| 45 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.41E-03 |
| 46 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.41E-03 |
| 47 | GO:0004311: farnesyltranstransferase activity | 1.63E-03 |
| 48 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.04E-03 |
| 49 | GO:0005198: structural molecule activity | 2.12E-03 |
| 50 | GO:0051287: NAD binding | 2.28E-03 |
| 51 | GO:0004177: aminopeptidase activity | 2.87E-03 |
| 52 | GO:0008559: xenobiotic-transporting ATPase activity | 2.87E-03 |
| 53 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.43E-03 |
| 54 | GO:0031418: L-ascorbic acid binding | 4.65E-03 |
| 55 | GO:0008565: protein transporter activity | 5.36E-03 |
| 56 | GO:0016301: kinase activity | 5.66E-03 |
| 57 | GO:0000166: nucleotide binding | 6.22E-03 |
| 58 | GO:0005199: structural constituent of cell wall | 7.48E-03 |
| 59 | GO:0046873: metal ion transmembrane transporter activity | 7.48E-03 |
| 60 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 7.85E-03 |
| 61 | GO:0004518: nuclease activity | 9.07E-03 |
| 62 | GO:0004601: peroxidase activity | 9.57E-03 |
| 63 | GO:0016788: hydrolase activity, acting on ester bonds | 9.75E-03 |
| 64 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.03E-02 |
| 65 | GO:0016597: amino acid binding | 1.08E-02 |
| 66 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.21E-02 |
| 67 | GO:0004683: calmodulin-dependent protein kinase activity | 1.26E-02 |
| 68 | GO:0052689: carboxylic ester hydrolase activity | 1.31E-02 |
| 69 | GO:0005509: calcium ion binding | 1.38E-02 |
| 70 | GO:0005506: iron ion binding | 1.49E-02 |
| 71 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.50E-02 |
| 72 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.60E-02 |
| 73 | GO:0008422: beta-glucosidase activity | 1.70E-02 |
| 74 | GO:0004364: glutathione transferase activity | 1.86E-02 |
| 75 | GO:0016298: lipase activity | 2.43E-02 |
| 76 | GO:0020037: heme binding | 2.71E-02 |
| 77 | GO:0016887: ATPase activity | 2.73E-02 |
| 78 | GO:0051082: unfolded protein binding | 3.04E-02 |
| 79 | GO:0008026: ATP-dependent helicase activity | 3.17E-02 |
| 80 | GO:0030170: pyridoxal phosphate binding | 3.85E-02 |
| 81 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.27E-02 |
| 82 | GO:0015297: antiporter activity | 4.34E-02 |
| 83 | GO:0005507: copper ion binding | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046861: glyoxysomal membrane | 1.53E-06 |
| 2 | GO:0031597: cytosolic proteasome complex | 2.53E-05 |
| 3 | GO:0031595: nuclear proteasome complex | 3.42E-05 |
| 4 | GO:0009514: glyoxysome | 5.72E-05 |
| 5 | GO:0005773: vacuole | 8.31E-05 |
| 6 | GO:0016442: RISC complex | 8.61E-05 |
| 7 | GO:0008540: proteasome regulatory particle, base subcomplex | 8.63E-05 |
| 8 | GO:0000502: proteasome complex | 2.59E-04 |
| 9 | GO:0009530: primary cell wall | 3.42E-04 |
| 10 | GO:0005775: vacuolar lumen | 4.92E-04 |
| 11 | GO:0005776: autophagosome | 6.55E-04 |
| 12 | GO:0005829: cytosol | 7.37E-04 |
| 13 | GO:0008250: oligosaccharyltransferase complex | 8.29E-04 |
| 14 | GO:0000421: autophagosome membrane | 1.63E-03 |
| 15 | GO:0005774: vacuolar membrane | 1.82E-03 |
| 16 | GO:0005779: integral component of peroxisomal membrane | 1.86E-03 |
| 17 | GO:0010494: cytoplasmic stress granule | 2.10E-03 |
| 18 | GO:0008180: COP9 signalosome | 2.10E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 2.29E-03 |
| 20 | GO:0005635: nuclear envelope | 2.71E-03 |
| 21 | GO:0005765: lysosomal membrane | 2.87E-03 |
| 22 | GO:0048471: perinuclear region of cytoplasm | 2.87E-03 |
| 23 | GO:0005750: mitochondrial respiratory chain complex III | 3.73E-03 |
| 24 | GO:0005886: plasma membrane | 5.47E-03 |
| 25 | GO:0031410: cytoplasmic vesicle | 5.66E-03 |
| 26 | GO:0016020: membrane | 7.25E-03 |
| 27 | GO:0005777: peroxisome | 7.41E-03 |
| 28 | GO:0005618: cell wall | 8.27E-03 |
| 29 | GO:0005778: peroxisomal membrane | 1.03E-02 |
| 30 | GO:0000932: P-body | 1.12E-02 |
| 31 | GO:0005788: endoplasmic reticulum lumen | 1.17E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 1.35E-02 |
| 33 | GO:0005643: nuclear pore | 1.35E-02 |
| 34 | GO:0000325: plant-type vacuole | 1.50E-02 |
| 35 | GO:0005743: mitochondrial inner membrane | 1.63E-02 |
| 36 | GO:0005794: Golgi apparatus | 1.73E-02 |
| 37 | GO:0009506: plasmodesma | 2.46E-02 |
| 38 | GO:0005789: endoplasmic reticulum membrane | 2.60E-02 |
| 39 | GO:0005834: heterotrimeric G-protein complex | 2.79E-02 |