GO Enrichment Analysis of Co-expressed Genes with
AT3G48540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 2 | GO:0010495: long-distance posttranscriptional gene silencing | 2.32E-06 |
| 3 | GO:0070919: production of siRNA involved in chromatin silencing by small RNA | 1.23E-05 |
| 4 | GO:0016458: gene silencing | 4.74E-05 |
| 5 | GO:0009643: photosynthetic acclimation | 4.74E-05 |
| 6 | GO:0010310: regulation of hydrogen peroxide metabolic process | 5.85E-05 |
| 7 | GO:0006535: cysteine biosynthetic process from serine | 1.39E-04 |
| 8 | GO:0030422: production of siRNA involved in RNA interference | 1.39E-04 |
| 9 | GO:0016441: posttranscriptional gene silencing | 1.39E-04 |
| 10 | GO:0005992: trehalose biosynthetic process | 2.54E-04 |
| 11 | GO:0019344: cysteine biosynthetic process | 2.54E-04 |
| 12 | GO:0007623: circadian rhythm | 2.09E-03 |
| 13 | GO:0015979: photosynthesis | 3.55E-03 |
| 14 | GO:0009734: auxin-activated signaling pathway | 5.35E-03 |
| 15 | GO:0009416: response to light stimulus | 6.27E-03 |
| 16 | GO:0030154: cell differentiation | 1.09E-02 |
| 17 | GO:0050832: defense response to fungus | 2.23E-02 |
| 18 | GO:0016567: protein ubiquitination | 2.26E-02 |
| 19 | GO:0006508: proteolysis | 2.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003968: RNA-directed 5'-3' RNA polymerase activity | 4.74E-05 |
| 2 | GO:0004124: cysteine synthase activity | 5.85E-05 |
| 3 | GO:0004805: trehalose-phosphatase activity | 1.39E-04 |
| 4 | GO:0001085: RNA polymerase II transcription factor binding | 4.04E-04 |
| 5 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 7.68E-04 |
| 6 | GO:0030170: pyridoxal phosphate binding | 1.81E-03 |
| 7 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.84E-03 |
| 8 | GO:0003682: chromatin binding | 2.91E-03 |
| 9 | GO:0016740: transferase activity | 7.20E-03 |
| 10 | GO:0005516: calmodulin binding | 8.33E-03 |
| 11 | GO:0008270: zinc ion binding | 1.82E-02 |
| 12 | GO:0043565: sequence-specific DNA binding | 3.28E-02 |
| 13 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.95E-02 |
| 14 | GO:0003723: RNA binding | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005667: transcription factor complex | 6.32E-04 |
| 2 | GO:0031977: thylakoid lumen | 9.08E-04 |
| 3 | GO:0005654: nucleoplasm | 1.66E-03 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.69E-03 |
| 5 | GO:0046658: anchored component of plasma membrane | 2.52E-03 |
| 6 | GO:0031225: anchored component of membrane | 8.55E-03 |
| 7 | GO:0005730: nucleolus | 1.49E-02 |
| 8 | GO:0005634: nucleus | 2.07E-02 |