co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G48500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
4	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
5	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
6	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
7	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
8	GO:0042407: cristae formation	0.00E+00
9	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
10	GO:0007638: mechanosensory behavior	0.00E+00
11	GO:0006573: valine metabolic process	0.00E+00
12	GO:0045184: establishment of protein localization	0.00E+00
13	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
14	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
15	GO:0070125: mitochondrial translational elongation	0.00E+00
16	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
17	GO:0070979: protein K11-linked ubiquitination	0.00E+00
18	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
19	GO:0046739: transport of virus in multicellular host	1.40E-06
20	GO:0009658: chloroplast organization	1.72E-06
21	GO:1900871: chloroplast mRNA modification	2.02E-05
22	GO:0018026: peptidyl-lysine monomethylation	2.02E-05
23	GO:1902326: positive regulation of chlorophyll biosynthetic process	2.02E-05
24	GO:0010027: thylakoid membrane organization	5.90E-05
25	GO:1900865: chloroplast RNA modification	1.44E-04
26	GO:0009416: response to light stimulus	1.81E-04
27	GO:0045038: protein import into chloroplast thylakoid membrane	3.50E-04
28	GO:0080110: sporopollenin biosynthetic process	3.50E-04
29	GO:0010207: photosystem II assembly	3.84E-04
30	GO:0009793: embryo development ending in seed dormancy	4.74E-04
31	GO:0042793: transcription from plastid promoter	4.87E-04
32	GO:0016554: cytidine to uridine editing	4.87E-04
33	GO:0040008: regulation of growth	5.71E-04
34	GO:0009082: branched-chain amino acid biosynthetic process	6.45E-04
35	GO:0009099: valine biosynthetic process	6.45E-04
36	GO:0030488: tRNA methylation	6.45E-04
37	GO:1901259: chloroplast rRNA processing	6.45E-04
38	GO:0042372: phylloquinone biosynthetic process	6.45E-04
39	GO:0009451: RNA modification	6.58E-04
40	GO:0009090: homoserine biosynthetic process	6.88E-04
41	GO:0070509: calcium ion import	6.88E-04
42	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	6.88E-04
43	GO:0042659: regulation of cell fate specification	6.88E-04
44	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	6.88E-04
45	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	6.88E-04
46	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	6.88E-04
47	GO:1904966: positive regulation of vitamin E biosynthetic process	6.88E-04
48	GO:0043266: regulation of potassium ion transport	6.88E-04
49	GO:0010063: positive regulation of trichoblast fate specification	6.88E-04
50	GO:0010480: microsporocyte differentiation	6.88E-04
51	GO:1904964: positive regulation of phytol biosynthetic process	6.88E-04
52	GO:0090558: plant epidermis development	6.88E-04
53	GO:0006551: leucine metabolic process	6.88E-04
54	GO:0042371: vitamin K biosynthetic process	6.88E-04
55	GO:0043686: co-translational protein modification	6.88E-04
56	GO:2000021: regulation of ion homeostasis	6.88E-04
57	GO:0035987: endodermal cell differentiation	6.88E-04
58	GO:0051247: positive regulation of protein metabolic process	6.88E-04
59	GO:1902458: positive regulation of stomatal opening	6.88E-04
60	GO:0015904: tetracycline transport	6.88E-04
61	GO:2000905: negative regulation of starch metabolic process	6.88E-04
62	GO:0005991: trehalose metabolic process	6.88E-04
63	GO:0048363: mucilage pectin metabolic process	6.88E-04
64	GO:0006419: alanyl-tRNA aminoacylation	6.88E-04
65	GO:0048437: floral organ development	8.23E-04
66	GO:0009097: isoleucine biosynthetic process	1.24E-03
67	GO:0010497: plasmodesmata-mediated intercellular transport	1.24E-03
68	GO:0009657: plastid organization	1.24E-03
69	GO:0010087: phloem or xylem histogenesis	1.29E-03
70	GO:0006662: glycerol ether metabolic process	1.43E-03
71	GO:0010182: sugar mediated signaling pathway	1.43E-03
72	GO:0010305: leaf vascular tissue pattern formation	1.43E-03
73	GO:0030187: melatonin biosynthetic process	1.48E-03
74	GO:0006432: phenylalanyl-tRNA aminoacylation	1.48E-03
75	GO:0060359: response to ammonium ion	1.48E-03
76	GO:0048255: mRNA stabilization	1.48E-03
77	GO:0071668: plant-type cell wall assembly	1.48E-03
78	GO:1904143: positive regulation of carotenoid biosynthetic process	1.48E-03
79	GO:0080009: mRNA methylation	1.48E-03
80	GO:0006423: cysteinyl-tRNA aminoacylation	1.48E-03
81	GO:0001682: tRNA 5'-leader removal	1.48E-03
82	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.48E-03
83	GO:0006568: tryptophan metabolic process	1.48E-03
84	GO:0010024: phytochromobilin biosynthetic process	1.48E-03
85	GO:0009098: leucine biosynthetic process	1.77E-03
86	GO:0009773: photosynthetic electron transport in photosystem I	2.39E-03
87	GO:0006954: inflammatory response	2.45E-03
88	GO:0033591: response to L-ascorbic acid	2.45E-03
89	GO:0090708: specification of plant organ axis polarity	2.45E-03
90	GO:0034051: negative regulation of plant-type hypersensitive response	2.45E-03
91	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.45E-03
92	GO:0009405: pathogenesis	2.45E-03
93	GO:0090153: regulation of sphingolipid biosynthetic process	2.45E-03
94	GO:0006788: heme oxidation	2.45E-03
95	GO:0043157: response to cation stress	2.45E-03
96	GO:0005977: glycogen metabolic process	2.45E-03
97	GO:0048586: regulation of long-day photoperiodism, flowering	2.45E-03
98	GO:0010588: cotyledon vascular tissue pattern formation	3.12E-03
99	GO:0019048: modulation by virus of host morphology or physiology	3.56E-03
100	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.56E-03
101	GO:0043572: plastid fission	3.56E-03
102	GO:0042989: sequestering of actin monomers	3.56E-03
103	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	3.56E-03
104	GO:0031048: chromatin silencing by small RNA	3.56E-03
105	GO:2001141: regulation of RNA biosynthetic process	3.56E-03
106	GO:0090308: regulation of methylation-dependent chromatin silencing	3.56E-03
107	GO:0016556: mRNA modification	3.56E-03
108	GO:0009067: aspartate family amino acid biosynthetic process	3.56E-03
109	GO:0010071: root meristem specification	3.56E-03
110	GO:0051513: regulation of monopolar cell growth	3.56E-03
111	GO:0007231: osmosensory signaling pathway	3.56E-03
112	GO:0009102: biotin biosynthetic process	3.56E-03
113	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.56E-03
114	GO:0010306: rhamnogalacturonan II biosynthetic process	3.56E-03
115	GO:0015995: chlorophyll biosynthetic process	3.71E-03
116	GO:0070588: calcium ion transmembrane transport	3.96E-03
117	GO:0009742: brassinosteroid mediated signaling pathway	4.67E-03
118	GO:0042274: ribosomal small subunit biogenesis	4.81E-03
119	GO:2000306: positive regulation of photomorphogenesis	4.81E-03
120	GO:0006221: pyrimidine nucleotide biosynthetic process	4.81E-03
121	GO:0010021: amylopectin biosynthetic process	4.81E-03
122	GO:0051567: histone H3-K9 methylation	4.81E-03
123	GO:0008295: spermidine biosynthetic process	4.81E-03
124	GO:0010109: regulation of photosynthesis	4.81E-03
125	GO:0030104: water homeostasis	4.81E-03
126	GO:0033500: carbohydrate homeostasis	4.81E-03
127	GO:0034599: cellular response to oxidative stress	6.08E-03
128	GO:0030041: actin filament polymerization	6.18E-03
129	GO:0032876: negative regulation of DNA endoreduplication	6.18E-03
130	GO:0032543: mitochondrial translation	6.18E-03
131	GO:0010236: plastoquinone biosynthetic process	6.18E-03
132	GO:0031365: N-terminal protein amino acid modification	6.18E-03
133	GO:0016123: xanthophyll biosynthetic process	6.18E-03
134	GO:0016131: brassinosteroid metabolic process	6.18E-03
135	GO:0006730: one-carbon metabolic process	6.55E-03
136	GO:0009790: embryo development	7.64E-03
137	GO:0010190: cytochrome b6f complex assembly	7.68E-03
138	GO:0033365: protein localization to organelle	7.68E-03
139	GO:0016458: gene silencing	7.68E-03
140	GO:0032973: amino acid export	7.68E-03
141	GO:0018258: protein O-linked glycosylation via hydroxyproline	7.68E-03
142	GO:0000741: karyogamy	7.68E-03
143	GO:0010405: arabinogalactan protein metabolic process	7.68E-03
144	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	7.68E-03
145	GO:0006655: phosphatidylglycerol biosynthetic process	7.68E-03
146	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	7.68E-03
147	GO:0009959: negative gravitropism	7.68E-03
148	GO:0010584: pollen exine formation	7.79E-03
149	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.47E-03
150	GO:0080022: primary root development	9.14E-03
151	GO:0008033: tRNA processing	9.14E-03
152	GO:0006458: 'de novo' protein folding	9.29E-03
153	GO:0017148: negative regulation of translation	9.29E-03
154	GO:0048280: vesicle fusion with Golgi apparatus	9.29E-03
155	GO:0042026: protein refolding	9.29E-03
156	GO:0009088: threonine biosynthetic process	9.29E-03
157	GO:2000033: regulation of seed dormancy process	9.29E-03
158	GO:0080086: stamen filament development	9.29E-03
159	GO:0009648: photoperiodism	9.29E-03
160	GO:2000067: regulation of root morphogenesis	9.29E-03
161	GO:0010268: brassinosteroid homeostasis	9.87E-03
162	GO:0010197: polar nucleus fusion	9.87E-03
163	GO:0048868: pollen tube development	9.87E-03
164	GO:0009741: response to brassinosteroid	9.87E-03
165	GO:0009958: positive gravitropism	9.87E-03
166	GO:0009646: response to absence of light	1.06E-02
167	GO:0010098: suspensor development	1.10E-02
168	GO:0009772: photosynthetic electron transport in photosystem II	1.10E-02
169	GO:0043090: amino acid import	1.10E-02
170	GO:0006400: tRNA modification	1.10E-02
171	GO:0051510: regulation of unidimensional cell growth	1.10E-02
172	GO:0048528: post-embryonic root development	1.10E-02
173	GO:0009733: response to auxin	1.27E-02
174	GO:0048564: photosystem I assembly	1.28E-02
175	GO:0006605: protein targeting	1.28E-02
176	GO:0010078: maintenance of root meristem identity	1.28E-02
177	GO:0032875: regulation of DNA endoreduplication	1.28E-02
178	GO:2000070: regulation of response to water deprivation	1.28E-02
179	GO:0046620: regulation of organ growth	1.28E-02
180	GO:0055075: potassium ion homeostasis	1.28E-02
181	GO:0070413: trehalose metabolism in response to stress	1.28E-02
182	GO:0000105: histidine biosynthetic process	1.28E-02
183	GO:0009231: riboflavin biosynthetic process	1.28E-02
184	GO:0001522: pseudouridine synthesis	1.28E-02
185	GO:0016032: viral process	1.31E-02
186	GO:0071482: cellular response to light stimulus	1.48E-02
187	GO:0015996: chlorophyll catabolic process	1.48E-02
188	GO:0007186: G-protein coupled receptor signaling pathway	1.48E-02
189	GO:0032544: plastid translation	1.48E-02
190	GO:0043562: cellular response to nitrogen levels	1.48E-02
191	GO:0048367: shoot system development	1.51E-02
192	GO:0080144: amino acid homeostasis	1.68E-02
193	GO:0046916: cellular transition metal ion homeostasis	1.68E-02
194	GO:0000373: Group II intron splicing	1.68E-02
195	GO:0048507: meristem development	1.68E-02
196	GO:0000902: cell morphogenesis	1.68E-02
197	GO:0006397: mRNA processing	1.69E-02
198	GO:0009638: phototropism	1.89E-02
199	GO:0043067: regulation of programmed cell death	1.89E-02
200	GO:0006779: porphyrin-containing compound biosynthetic process	1.89E-02
201	GO:0009086: methionine biosynthetic process	1.89E-02
202	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.89E-02
203	GO:0031425: chloroplast RNA processing	1.89E-02
204	GO:2000280: regulation of root development	1.89E-02
205	GO:0010162: seed dormancy process	2.11E-02
206	GO:0006896: Golgi to vacuole transport	2.11E-02
207	GO:0006782: protoporphyrinogen IX biosynthetic process	2.11E-02
208	GO:0030422: production of siRNA involved in RNA interference	2.11E-02
209	GO:0009299: mRNA transcription	2.11E-02
210	GO:0009089: lysine biosynthetic process via diaminopimelate	2.34E-02
211	GO:0009073: aromatic amino acid family biosynthetic process	2.34E-02
212	GO:0043085: positive regulation of catalytic activity	2.34E-02
213	GO:0006816: calcium ion transport	2.34E-02
214	GO:0006352: DNA-templated transcription, initiation	2.34E-02
215	GO:0048229: gametophyte development	2.34E-02
216	GO:0006415: translational termination	2.34E-02
217	GO:0010216: maintenance of DNA methylation	2.34E-02
218	GO:0009684: indoleacetic acid biosynthetic process	2.34E-02
219	GO:0019684: photosynthesis, light reaction	2.34E-02
220	GO:0048366: leaf development	2.44E-02
221	GO:0005983: starch catabolic process	2.58E-02
222	GO:0016024: CDP-diacylglycerol biosynthetic process	2.58E-02
223	GO:0045037: protein import into chloroplast stroma	2.58E-02
224	GO:0048527: lateral root development	2.69E-02
225	GO:0009734: auxin-activated signaling pathway	2.81E-02
226	GO:0055114: oxidation-reduction process	2.82E-02
227	GO:0010628: positive regulation of gene expression	2.83E-02
228	GO:0009691: cytokinin biosynthetic process	2.83E-02
229	GO:0009718: anthocyanin-containing compound biosynthetic process	2.83E-02
230	GO:0010075: regulation of meristem growth	2.83E-02
231	GO:0009725: response to hormone	2.83E-02
232	GO:0009767: photosynthetic electron transport chain	2.83E-02
233	GO:0045087: innate immune response	2.95E-02
234	GO:0016051: carbohydrate biosynthetic process	2.95E-02
235	GO:0048467: gynoecium development	3.08E-02
236	GO:0006541: glutamine metabolic process	3.08E-02
237	GO:0010020: chloroplast fission	3.08E-02
238	GO:0009934: regulation of meristem structural organization	3.08E-02
239	GO:0015979: photosynthesis	3.20E-02
240	GO:0019853: L-ascorbic acid biosynthetic process	3.34E-02
241	GO:0090351: seedling development	3.34E-02
242	GO:0010030: positive regulation of seed germination	3.34E-02
243	GO:0045454: cell redox homeostasis	3.43E-02
244	GO:0000162: tryptophan biosynthetic process	3.61E-02
245	GO:0006833: water transport	3.61E-02
246	GO:0051017: actin filament bundle assembly	3.89E-02
247	GO:0007010: cytoskeleton organization	3.89E-02
248	GO:0005992: trehalose biosynthetic process	3.89E-02
249	GO:0008299: isoprenoid biosynthetic process	4.17E-02
250	GO:0006418: tRNA aminoacylation for protein translation	4.17E-02
251	GO:0051302: regulation of cell division	4.17E-02
252	GO:0007166: cell surface receptor signaling pathway	4.29E-02
253	GO:0016042: lipid catabolic process	4.45E-02
254	GO:0061077: chaperone-mediated protein folding	4.46E-02
255	GO:0006306: DNA methylation	4.46E-02
256	GO:0048511: rhythmic process	4.46E-02
257	GO:0030245: cellulose catabolic process	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
3	GO:0004823: leucine-tRNA ligase activity	0.00E+00
4	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
5	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
6	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
7	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
8	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
9	GO:0004076: biotin synthase activity	0.00E+00
10	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
11	GO:0003723: RNA binding	3.42E-06
12	GO:0005528: FK506 binding	5.08E-05
13	GO:0001872: (1->3)-beta-D-glucan binding	1.37E-04
14	GO:0016279: protein-lysine N-methyltransferase activity	2.33E-04
15	GO:0004519: endonuclease activity	5.62E-04
16	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.88E-04
17	GO:0016776: phosphotransferase activity, phosphate group as acceptor	6.88E-04
18	GO:0019203: carbohydrate phosphatase activity	6.88E-04
19	GO:0003984: acetolactate synthase activity	6.88E-04
20	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	6.88E-04
21	GO:0008158: hedgehog receptor activity	6.88E-04
22	GO:0008395: steroid hydroxylase activity	6.88E-04
23	GO:0080042: ADP-glucose pyrophosphohydrolase activity	6.88E-04
24	GO:0005080: protein kinase C binding	6.88E-04
25	GO:0008242: omega peptidase activity	6.88E-04
26	GO:0050308: sugar-phosphatase activity	6.88E-04
27	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	6.88E-04
28	GO:0004813: alanine-tRNA ligase activity	6.88E-04
29	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.88E-04
30	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	6.88E-04
31	GO:0042586: peptide deformylase activity	6.88E-04
32	GO:0052381: tRNA dimethylallyltransferase activity	6.88E-04
33	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	6.88E-04
34	GO:0050139: nicotinate-N-glucosyltransferase activity	6.88E-04
35	GO:0051777: ent-kaurenoate oxidase activity	6.88E-04
36	GO:0047134: protein-disulfide reductase activity	1.17E-03
37	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.48E-03
38	GO:0004817: cysteine-tRNA ligase activity	1.48E-03
39	GO:0019156: isoamylase activity	1.48E-03
40	GO:0034722: gamma-glutamyl-peptidase activity	1.48E-03
41	GO:0008805: carbon-monoxide oxygenase activity	1.48E-03
42	GO:0008493: tetracycline transporter activity	1.48E-03
43	GO:0004826: phenylalanine-tRNA ligase activity	1.48E-03
44	GO:0004412: homoserine dehydrogenase activity	1.48E-03
45	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.48E-03
46	GO:0017118: lipoyltransferase activity	1.48E-03
47	GO:0003852: 2-isopropylmalate synthase activity	1.48E-03
48	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.48E-03
49	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.48E-03
50	GO:0043425: bHLH transcription factor binding	1.48E-03
51	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.48E-03
52	GO:0004766: spermidine synthase activity	1.48E-03
53	GO:0004791: thioredoxin-disulfide reductase activity	1.56E-03
54	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.99E-03
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.21E-03
56	GO:0004180: carboxypeptidase activity	2.45E-03
57	GO:0003913: DNA photolyase activity	2.45E-03
58	GO:0002161: aminoacyl-tRNA editing activity	2.45E-03
59	GO:0004148: dihydrolipoyl dehydrogenase activity	2.45E-03
60	GO:0016805: dipeptidase activity	2.45E-03
61	GO:0070402: NADPH binding	2.45E-03
62	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.45E-03
63	GO:0000049: tRNA binding	2.74E-03
64	GO:0016597: amino acid binding	2.80E-03
65	GO:0005262: calcium channel activity	3.12E-03
66	GO:0009982: pseudouridine synthase activity	3.12E-03
67	GO:0008266: poly(U) RNA binding	3.53E-03
68	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.56E-03
69	GO:0004072: aspartate kinase activity	3.56E-03
70	GO:0016149: translation release factor activity, codon specific	3.56E-03
71	GO:0052656: L-isoleucine transaminase activity	3.56E-03
72	GO:0009041: uridylate kinase activity	3.56E-03
73	GO:0043023: ribosomal large subunit binding	3.56E-03
74	GO:0052654: L-leucine transaminase activity	3.56E-03
75	GO:0035197: siRNA binding	3.56E-03
76	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.56E-03
77	GO:0016851: magnesium chelatase activity	3.56E-03
78	GO:0052655: L-valine transaminase activity	3.56E-03
79	GO:0004222: metalloendopeptidase activity	4.80E-03
80	GO:0004045: aminoacyl-tRNA hydrolase activity	4.81E-03
81	GO:0080032: methyl jasmonate esterase activity	4.81E-03
82	GO:0016987: sigma factor activity	4.81E-03
83	GO:0004084: branched-chain-amino-acid transaminase activity	4.81E-03
84	GO:0004392: heme oxygenase (decyclizing) activity	4.81E-03
85	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.81E-03
86	GO:0043495: protein anchor	4.81E-03
87	GO:0004659: prenyltransferase activity	4.81E-03
88	GO:0001053: plastid sigma factor activity	4.81E-03
89	GO:0005319: lipid transporter activity	4.81E-03
90	GO:0016788: hydrolase activity, acting on ester bonds	5.65E-03
91	GO:0004176: ATP-dependent peptidase activity	5.98E-03
92	GO:0016846: carbon-sulfur lyase activity	6.18E-03
93	GO:0003785: actin monomer binding	6.18E-03
94	GO:0004526: ribonuclease P activity	7.68E-03
95	GO:0004556: alpha-amylase activity	7.68E-03
96	GO:0016208: AMP binding	7.68E-03
97	GO:0004462: lactoylglutathione lyase activity	7.68E-03
98	GO:0008200: ion channel inhibitor activity	7.68E-03
99	GO:2001070: starch binding	7.68E-03
100	GO:0080030: methyl indole-3-acetate esterase activity	7.68E-03
101	GO:1990714: hydroxyproline O-galactosyltransferase activity	7.68E-03
102	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	9.29E-03
103	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.29E-03
104	GO:0008195: phosphatidate phosphatase activity	9.29E-03
105	GO:0052689: carboxylic ester hydrolase activity	9.51E-03
106	GO:0008080: N-acetyltransferase activity	9.87E-03
107	GO:0050662: coenzyme binding	1.06E-02
108	GO:0019899: enzyme binding	1.10E-02
109	GO:0043022: ribosome binding	1.28E-02
110	GO:0004033: aldo-keto reductase (NADP) activity	1.28E-02
111	GO:0008173: RNA methyltransferase activity	1.48E-02
112	GO:0046914: transition metal ion binding	1.48E-02
113	GO:0008237: metallopeptidase activity	1.58E-02
114	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.68E-02
115	GO:0003747: translation release factor activity	1.68E-02
116	GO:0016491: oxidoreductase activity	1.83E-02
117	GO:0015035: protein disulfide oxidoreductase activity	1.90E-02
118	GO:0030247: polysaccharide binding	2.10E-02
119	GO:0015020: glucuronosyltransferase activity	2.11E-02
120	GO:0008047: enzyme activator activity	2.11E-02
121	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.34E-02
122	GO:0008559: xenobiotic-transporting ATPase activity	2.34E-02
123	GO:0044183: protein binding involved in protein folding	2.34E-02
124	GO:0004521: endoribonuclease activity	2.58E-02
125	GO:0015266: protein channel activity	2.83E-02
126	GO:0004089: carbonate dehydratase activity	2.83E-02
127	GO:0031072: heat shock protein binding	2.83E-02
128	GO:0003824: catalytic activity	2.92E-02
129	GO:0003746: translation elongation factor activity	2.95E-02
130	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.08E-02
131	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.33E-02
132	GO:0008146: sulfotransferase activity	3.34E-02
133	GO:0051536: iron-sulfur cluster binding	3.89E-02
134	GO:0033612: receptor serine/threonine kinase binding	4.46E-02
135	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0005948: acetolactate synthase complex	0.00E+00
3	GO:0009507: chloroplast	6.51E-42
4	GO:0009570: chloroplast stroma	7.75E-16
5	GO:0009535: chloroplast thylakoid membrane	3.44E-06
6	GO:0009941: chloroplast envelope	9.57E-06
7	GO:0009508: plastid chromosome	1.99E-05
8	GO:0009295: nucleoid	4.51E-05
9	GO:0009543: chloroplast thylakoid lumen	5.47E-05
10	GO:0031969: chloroplast membrane	1.60E-04
11	GO:0030529: intracellular ribonucleoprotein complex	4.90E-04
12	GO:0009344: nitrite reductase complex [NAD(P)H]	6.88E-04
13	GO:0043190: ATP-binding cassette (ABC) transporter complex	6.88E-04
14	GO:0015629: actin cytoskeleton	9.53E-04
15	GO:0009706: chloroplast inner membrane	9.59E-04
16	GO:0009534: chloroplast thylakoid	9.96E-04
17	GO:0080085: signal recognition particle, chloroplast targeting	1.48E-03
18	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.48E-03
19	GO:0009528: plastid inner membrane	2.45E-03
20	GO:0010007: magnesium chelatase complex	2.45E-03
21	GO:0030095: chloroplast photosystem II	3.53E-03
22	GO:0042646: plastid nucleoid	3.56E-03
23	GO:0005719: nuclear euchromatin	3.56E-03
24	GO:0009707: chloroplast outer membrane	4.23E-03
25	GO:0030663: COPI-coated vesicle membrane	4.81E-03
26	GO:0009527: plastid outer membrane	4.81E-03
27	GO:0042651: thylakoid membrane	5.43E-03
28	GO:0009654: photosystem II oxygen evolving complex	5.43E-03
29	GO:0031977: thylakoid lumen	7.17E-03
30	GO:0042807: central vacuole	1.10E-02
31	GO:0019898: extrinsic component of membrane	1.14E-02
32	GO:0048226: Casparian strip	1.28E-02
33	GO:0012507: ER to Golgi transport vesicle membrane	1.28E-02
34	GO:0009501: amyloplast	1.28E-02
35	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.48E-02
36	GO:0000326: protein storage vacuole	1.48E-02
37	GO:0046658: anchored component of plasma membrane	1.51E-02
38	GO:0010319: stromule	1.58E-02
39	GO:0042644: chloroplast nucleoid	1.68E-02
40	GO:0005720: nuclear heterochromatin	1.68E-02
41	GO:0005680: anaphase-promoting complex	1.68E-02
42	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.68E-02
43	GO:0043231: intracellular membrane-bounded organelle	1.86E-02
44	GO:0016604: nuclear body	1.89E-02
45	GO:0015030: Cajal body	1.89E-02
46	GO:0000418: DNA-directed RNA polymerase IV complex	2.11E-02
47	GO:0030125: clathrin vesicle coat	2.11E-02
48	GO:0009579: thylakoid	2.15E-02
49	GO:0005938: cell cortex	2.83E-02
50	GO:0005759: mitochondrial matrix	3.23E-02
51	GO:0030176: integral component of endoplasmic reticulum membrane	3.34E-02
52	GO:0009705: plant-type vacuole membrane	3.64E-02
53	GO:0009536: plastid	3.65E-02
54	GO:0009532: plastid stroma	4.46E-02