Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019447: D-cysteine catabolic process0.00E+00
2GO:1900370: positive regulation of RNA interference0.00E+00
3GO:0060966: regulation of gene silencing by RNA0.00E+00
4GO:0035563: positive regulation of chromatin binding0.00E+00
5GO:0070829: heterochromatin maintenance0.00E+00
6GO:0071360: cellular response to exogenous dsRNA0.00E+00
7GO:0048263: determination of dorsal identity0.00E+00
8GO:0009855: determination of bilateral symmetry1.15E-07
9GO:0080060: integument development9.16E-07
10GO:0010014: meristem initiation9.16E-07
11GO:1900368: regulation of RNA interference1.13E-05
12GO:0010069: zygote asymmetric cytokinesis in embryo sac3.00E-05
13GO:1900111: positive regulation of histone H3-K9 dimethylation3.00E-05
14GO:0060919: auxin influx3.00E-05
15GO:0010424: DNA methylation on cytosine within a CG sequence3.00E-05
16GO:0060968: regulation of gene silencing5.40E-05
17GO:0032776: DNA methylation on cytosine5.40E-05
18GO:0060964: regulation of gene silencing by miRNA8.23E-05
19GO:1902476: chloride transmembrane transport8.23E-05
20GO:0031935: regulation of chromatin silencing1.14E-04
21GO:0009955: adaxial/abaxial pattern specification2.25E-04
22GO:0080111: DNA demethylation2.66E-04
23GO:0006821: chloride transport2.66E-04
24GO:0009827: plant-type cell wall modification3.52E-04
25GO:0006349: regulation of gene expression by genetic imprinting4.44E-04
26GO:0051555: flavonol biosynthetic process4.91E-04
27GO:0030422: production of siRNA involved in RNA interference4.91E-04
28GO:0048829: root cap development4.91E-04
29GO:0010072: primary shoot apical meristem specification5.39E-04
30GO:0010216: maintenance of DNA methylation5.39E-04
31GO:0010075: regulation of meristem growth6.40E-04
32GO:0009887: animal organ morphogenesis6.92E-04
33GO:0080188: RNA-directed DNA methylation7.45E-04
34GO:0009944: polarity specification of adaxial/abaxial axis8.54E-04
35GO:0010073: meristem maintenance9.08E-04
36GO:0003333: amino acid transmembrane transport9.65E-04
37GO:0006306: DNA methylation9.65E-04
38GO:0009294: DNA mediated transformation1.08E-03
39GO:0009693: ethylene biosynthetic process1.08E-03
40GO:0010087: phloem or xylem histogenesis1.26E-03
41GO:0010311: lateral root formation2.40E-03
42GO:0009910: negative regulation of flower development2.56E-03
43GO:0006865: amino acid transport2.64E-03
44GO:0009926: auxin polar transport3.23E-03
45GO:0009965: leaf morphogenesis3.50E-03
46GO:0016569: covalent chromatin modification4.83E-03
47GO:0030154: cell differentiation5.20E-03
48GO:0009451: RNA modification7.46E-03
49GO:0007049: cell cycle1.08E-02
50GO:0080167: response to karrikin1.16E-02
51GO:0050832: defense response to fungus1.42E-02
52GO:0009734: auxin-activated signaling pathway1.95E-02
53GO:0009908: flower development2.14E-02
54GO:0055085: transmembrane transport2.72E-02
55GO:0006457: protein folding2.76E-02
56GO:0006351: transcription, DNA-templated2.79E-02
57GO:0031640: killing of cells of other organism3.90E-02
58GO:0009733: response to auxin4.12E-02
RankGO TermAdjusted P value
1GO:0019148: D-cysteine desulfhydrase activity0.00E+00
2GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
3GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity0.00E+00
4GO:0005253: anion channel activity1.14E-04
5GO:0010328: auxin influx transmembrane transporter activity1.14E-04
6GO:0030414: peptidase inhibitor activity1.49E-04
7GO:0005247: voltage-gated chloride channel activity1.86E-04
8GO:0003886: DNA (cytosine-5-)-methyltransferase activity2.25E-04
9GO:0008289: lipid binding1.88E-03
10GO:0008236: serine-type peptidase activity2.25E-03
11GO:0050897: cobalt ion binding2.56E-03
12GO:0003677: DNA binding2.77E-03
13GO:0015293: symporter activity3.50E-03
14GO:0015171: amino acid transmembrane transporter activity4.24E-03
15GO:0080044: quercetin 7-O-glucosyltransferase activity4.73E-03
16GO:0080043: quercetin 3-O-glucosyltransferase activity4.73E-03
17GO:0004650: polygalacturonase activity4.73E-03
18GO:0004386: helicase activity5.34E-03
19GO:0016829: lyase activity6.20E-03
20GO:0004252: serine-type endopeptidase activity6.31E-03
21GO:0008194: UDP-glycosyltransferase activity7.93E-03
22GO:0008168: methyltransferase activity9.69E-03
23GO:0003682: chromatin binding1.04E-02
24GO:0004519: endonuclease activity1.62E-02
25GO:0003676: nucleic acid binding1.97E-02
26GO:0016740: transferase activity2.64E-02
27GO:0003700: transcription factor activity, sequence-specific DNA binding2.69E-02
28GO:0003824: catalytic activity4.06E-02
29GO:0005215: transporter activity4.08E-02
30GO:0046983: protein dimerization activity4.67E-02
RankGO TermAdjusted P value
1GO:0070176: DRM complex0.00E+00
2GO:0090577: RNA polymerase IV transcription factor complex0.00E+00
3GO:0031618: nuclear pericentric heterochromatin0.00E+00
4GO:0034707: chloride channel complex1.86E-04
5GO:0000123: histone acetyltransferase complex2.66E-04
6GO:0000419: DNA-directed RNA polymerase V complex7.99E-04
7GO:0005875: microtubule associated complex7.99E-04
8GO:0043231: intracellular membrane-bounded organelle1.50E-03
9GO:0031969: chloroplast membrane1.16E-02
10GO:0005777: peroxisome2.53E-02
11GO:0005622: intracellular3.46E-02
12GO:0009536: plastid4.39E-02
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Gene type



Gene DE type