co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G47700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018063: cytochrome c-heme linkage	0.00E+00
2	GO:0051553: flavone biosynthetic process	0.00E+00
3	GO:0071985: multivesicular body sorting pathway	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
6	GO:0016559: peroxisome fission	5.73E-05
7	GO:0015031: protein transport	6.87E-05
8	GO:0010230: alternative respiration	1.00E-04
9	GO:0010482: regulation of epidermal cell division	1.00E-04
10	GO:1900384: regulation of flavonol biosynthetic process	1.00E-04
11	GO:0032107: regulation of response to nutrient levels	1.00E-04
12	GO:0000719: photoreactive repair	2.36E-04
13	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.36E-04
14	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	2.36E-04
15	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	3.92E-04
16	GO:0044375: regulation of peroxisome size	3.92E-04
17	GO:0001676: long-chain fatty acid metabolic process	5.64E-04
18	GO:0055089: fatty acid homeostasis	5.64E-04
19	GO:0051639: actin filament network formation	5.64E-04
20	GO:0002239: response to oomycetes	5.64E-04
21	GO:0006623: protein targeting to vacuole	7.34E-04
22	GO:0051764: actin crosslink formation	7.50E-04
23	GO:0051567: histone H3-K9 methylation	7.50E-04
24	GO:0046283: anthocyanin-containing compound metabolic process	9.47E-04
25	GO:0006014: D-ribose metabolic process	1.16E-03
26	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.16E-03
27	GO:1900057: positive regulation of leaf senescence	1.62E-03
28	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	1.62E-03
29	GO:0006333: chromatin assembly or disassembly	1.62E-03
30	GO:2000014: regulation of endosperm development	1.62E-03
31	GO:0006605: protein targeting	1.87E-03
32	GO:0045010: actin nucleation	1.87E-03
33	GO:0006102: isocitrate metabolic process	1.87E-03
34	GO:0006997: nucleus organization	2.14E-03
35	GO:0017004: cytochrome complex assembly	2.14E-03
36	GO:0051707: response to other organism	2.32E-03
37	GO:0010112: regulation of systemic acquired resistance	2.41E-03
38	GO:0000902: cell morphogenesis	2.41E-03
39	GO:0009688: abscisic acid biosynthetic process	3.00E-03
40	GO:0048765: root hair cell differentiation	3.31E-03
41	GO:0045037: protein import into chloroplast stroma	3.63E-03
42	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.63E-03
43	GO:0000266: mitochondrial fission	3.63E-03
44	GO:0030048: actin filament-based movement	3.95E-03
45	GO:0030036: actin cytoskeleton organization	3.95E-03
46	GO:0010102: lateral root morphogenesis	3.95E-03
47	GO:0009620: response to fungus	4.04E-03
48	GO:0007015: actin filament organization	4.30E-03
49	GO:0090351: seedling development	4.64E-03
50	GO:0007033: vacuole organization	4.64E-03
51	GO:0009225: nucleotide-sugar metabolic process	4.64E-03
52	GO:0007031: peroxisome organization	4.64E-03
53	GO:0006636: unsaturated fatty acid biosynthetic process	5.00E-03
54	GO:0051017: actin filament bundle assembly	5.37E-03
55	GO:0051302: regulation of cell division	5.75E-03
56	GO:0006874: cellular calcium ion homeostasis	5.75E-03
57	GO:0010026: trichome differentiation	5.75E-03
58	GO:0009269: response to desiccation	6.14E-03
59	GO:0007005: mitochondrion organization	6.54E-03
60	GO:0009411: response to UV	6.94E-03
61	GO:0006012: galactose metabolic process	6.94E-03
62	GO:0010150: leaf senescence	7.61E-03
63	GO:0042147: retrograde transport, endosome to Golgi	7.78E-03
64	GO:0010118: stomatal movement	8.21E-03
65	GO:0010182: sugar mediated signaling pathway	8.65E-03
66	GO:0009960: endosperm development	8.65E-03
67	GO:0019252: starch biosynthetic process	9.56E-03
68	GO:0010193: response to ozone	1.00E-02
69	GO:0000302: response to reactive oxygen species	1.00E-02
70	GO:0006891: intra-Golgi vesicle-mediated transport	1.00E-02
71	GO:0002229: defense response to oomycetes	1.00E-02
72	GO:0071805: potassium ion transmembrane transport	1.20E-02
73	GO:0051607: defense response to virus	1.25E-02
74	GO:0006970: response to osmotic stress	1.27E-02
75	GO:0009627: systemic acquired resistance	1.40E-02
76	GO:0016192: vesicle-mediated transport	1.54E-02
77	GO:0009817: defense response to fungus, incompatible interaction	1.57E-02
78	GO:0009813: flavonoid biosynthetic process	1.62E-02
79	GO:0009407: toxin catabolic process	1.68E-02
80	GO:0048527: lateral root development	1.74E-02
81	GO:0006886: intracellular protein transport	1.81E-02
82	GO:0006099: tricarboxylic acid cycle	1.91E-02
83	GO:0042742: defense response to bacterium	1.99E-02
84	GO:0006631: fatty acid metabolic process	2.10E-02
85	GO:0009636: response to toxic substance	2.41E-02
86	GO:0009965: leaf morphogenesis	2.41E-02
87	GO:0009846: pollen germination	2.61E-02
88	GO:0006813: potassium ion transport	2.75E-02
89	GO:0009736: cytokinin-activated signaling pathway	2.75E-02
90	GO:0006417: regulation of translation	2.95E-02
91	GO:0009734: auxin-activated signaling pathway	3.05E-02
92	GO:0016569: covalent chromatin modification	3.38E-02
93	GO:0045893: positive regulation of transcription, DNA-templated	4.40E-02
94	GO:0006633: fatty acid biosynthetic process	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
4	GO:0032266: phosphatidylinositol-3-phosphate binding	1.00E-04
5	GO:0009000: selenocysteine lyase activity	1.00E-04
6	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	3.92E-04
7	GO:0043169: cation binding	3.92E-04
8	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.64E-04
9	GO:0035529: NADH pyrophosphatase activity	5.64E-04
10	GO:0030527: structural constituent of chromatin	5.64E-04
11	GO:0050378: UDP-glucuronate 4-epimerase activity	7.50E-04
12	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	9.47E-04
13	GO:0047631: ADP-ribose diphosphatase activity	9.47E-04
14	GO:0030151: molybdenum ion binding	9.47E-04
15	GO:0000210: NAD+ diphosphatase activity	1.16E-03
16	GO:0003978: UDP-glucose 4-epimerase activity	1.38E-03
17	GO:0102391: decanoate--CoA ligase activity	1.38E-03
18	GO:0004747: ribokinase activity	1.38E-03
19	GO:0008320: protein transmembrane transporter activity	1.62E-03
20	GO:0004467: long-chain fatty acid-CoA ligase activity	1.62E-03
21	GO:0008865: fructokinase activity	1.87E-03
22	GO:0005198: structural molecule activity	2.61E-03
23	GO:0003774: motor activity	4.30E-03
24	GO:0005217: intracellular ligand-gated ion channel activity	4.64E-03
25	GO:0003712: transcription cofactor activity	4.64E-03
26	GO:0004970: ionotropic glutamate receptor activity	4.64E-03
27	GO:0001046: core promoter sequence-specific DNA binding	5.37E-03
28	GO:0043130: ubiquitin binding	5.37E-03
29	GO:0015079: potassium ion transmembrane transporter activity	5.75E-03
30	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.35E-03
31	GO:0050662: coenzyme binding	9.10E-03
32	GO:0051015: actin filament binding	1.10E-02
33	GO:0004806: triglyceride lipase activity	1.46E-02
34	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.86E-02
35	GO:0050661: NADP binding	2.03E-02
36	GO:0042393: histone binding	2.03E-02
37	GO:0004364: glutathione transferase activity	2.16E-02
38	GO:0003924: GTPase activity	2.17E-02
39	GO:0051287: NAD binding	2.55E-02
40	GO:0016887: ATPase activity	3.36E-02
41	GO:0022857: transmembrane transporter activity	3.38E-02
42	GO:0015035: protein disulfide oxidoreductase activity	3.61E-02
43	GO:0016829: lyase activity	4.38E-02
44	GO:0030170: pyridoxal phosphate binding	4.46E-02
45	GO:0008565: protein transporter activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0017119: Golgi transport complex	1.30E-04
2	GO:0000814: ESCRT II complex	2.36E-04
3	GO:0005789: endoplasmic reticulum membrane	5.53E-04
4	GO:0032432: actin filament bundle	5.64E-04
5	GO:0030658: transport vesicle membrane	5.64E-04
6	GO:0031965: nuclear membrane	7.34E-04
7	GO:0032580: Golgi cisterna membrane	9.40E-04
8	GO:0005778: peroxisomal membrane	9.96E-04
9	GO:0005885: Arp2/3 protein complex	1.38E-03
10	GO:0005794: Golgi apparatus	1.57E-03
11	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.62E-03
12	GO:0005779: integral component of peroxisomal membrane	2.14E-03
13	GO:0030665: clathrin-coated vesicle membrane	2.70E-03
14	GO:0008540: proteasome regulatory particle, base subcomplex	2.70E-03
15	GO:0031225: anchored component of membrane	3.18E-03
16	GO:0005884: actin filament	3.31E-03
17	GO:0016021: integral component of membrane	3.87E-03
18	GO:0005769: early endosome	5.00E-03
19	GO:0005741: mitochondrial outer membrane	6.14E-03
20	GO:0005770: late endosome	8.65E-03
21	GO:0019898: extrinsic component of membrane	9.56E-03
22	GO:0009504: cell plate	9.56E-03
23	GO:0005777: peroxisome	9.68E-03
24	GO:0000785: chromatin	1.05E-02
25	GO:0005802: trans-Golgi network	1.48E-02
26	GO:0005768: endosome	1.74E-02
27	GO:0005829: cytosol	1.76E-02
28	GO:0031902: late endosome membrane	2.10E-02
29	GO:0000502: proteasome complex	2.75E-02
30	GO:0005635: nuclear envelope	2.88E-02
31	GO:0000139: Golgi membrane	2.90E-02
32	GO:0005887: integral component of plasma membrane	2.94E-02
33	GO:0005783: endoplasmic reticulum	3.12E-02
34	GO:0005623: cell	4.22E-02
35	GO:0005886: plasma membrane	4.29E-02