co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G46690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
5	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
6	GO:0010273: detoxification of copper ion	0.00E+00
7	GO:0015690: aluminum cation transport	0.00E+00
8	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
9	GO:0046865: terpenoid transport	0.00E+00
10	GO:0051553: flavone biosynthetic process	0.00E+00
11	GO:0010324: membrane invagination	0.00E+00
12	GO:0010112: regulation of systemic acquired resistance	3.59E-09
13	GO:0042742: defense response to bacterium	2.04E-07
14	GO:0009611: response to wounding	3.99E-07
15	GO:0006952: defense response	1.13E-06
16	GO:0071456: cellular response to hypoxia	1.15E-05
17	GO:0009751: response to salicylic acid	1.98E-05
18	GO:0051707: response to other organism	3.21E-05
19	GO:1903507: negative regulation of nucleic acid-templated transcription	4.88E-05
20	GO:0009617: response to bacterium	9.24E-05
21	GO:0009643: photosynthetic acclimation	1.68E-04
22	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.22E-04
23	GO:0006979: response to oxidative stress	2.36E-04
24	GO:1900057: positive regulation of leaf senescence	2.96E-04
25	GO:0032107: regulation of response to nutrient levels	3.44E-04
26	GO:0048508: embryonic meristem development	3.44E-04
27	GO:0015760: glucose-6-phosphate transport	3.44E-04
28	GO:0033306: phytol metabolic process	3.44E-04
29	GO:0009700: indole phytoalexin biosynthetic process	3.44E-04
30	GO:0046246: terpene biosynthetic process	3.44E-04
31	GO:0050691: regulation of defense response to virus by host	3.44E-04
32	GO:0034214: protein hexamerization	3.44E-04
33	GO:1990542: mitochondrial transmembrane transport	3.44E-04
34	GO:0042391: regulation of membrane potential	3.48E-04
35	GO:0009636: response to toxic substance	3.81E-04
36	GO:0031347: regulation of defense response	4.29E-04
37	GO:0010120: camalexin biosynthetic process	4.56E-04
38	GO:0007166: cell surface receptor signaling pathway	5.05E-04
39	GO:0009835: fruit ripening	5.47E-04
40	GO:0050832: defense response to fungus	5.74E-04
41	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.45E-04
42	GO:0009753: response to jasmonic acid	7.16E-04
43	GO:0015914: phospholipid transport	7.51E-04
44	GO:0010155: regulation of proton transport	7.51E-04
45	GO:0009838: abscission	7.51E-04
46	GO:0080181: lateral root branching	7.51E-04
47	GO:0006024: glycosaminoglycan biosynthetic process	7.51E-04
48	GO:0055088: lipid homeostasis	7.51E-04
49	GO:0015908: fatty acid transport	7.51E-04
50	GO:0044419: interspecies interaction between organisms	7.51E-04
51	GO:0009945: radial axis specification	7.51E-04
52	GO:0015712: hexose phosphate transport	7.51E-04
53	GO:0019725: cellular homeostasis	7.51E-04
54	GO:0051258: protein polymerization	7.51E-04
55	GO:0015012: heparan sulfate proteoglycan biosynthetic process	7.51E-04
56	GO:0071668: plant-type cell wall assembly	7.51E-04
57	GO:0008152: metabolic process	7.57E-04
58	GO:0009620: response to fungus	7.59E-04
59	GO:0006468: protein phosphorylation	7.74E-04
60	GO:0071398: cellular response to fatty acid	1.21E-03
61	GO:0010186: positive regulation of cellular defense response	1.21E-03
62	GO:0015783: GDP-fucose transport	1.21E-03
63	GO:0010476: gibberellin mediated signaling pathway	1.21E-03
64	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.21E-03
65	GO:0015692: lead ion transport	1.21E-03
66	GO:0015695: organic cation transport	1.21E-03
67	GO:0015714: phosphoenolpyruvate transport	1.21E-03
68	GO:0080168: abscisic acid transport	1.21E-03
69	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.21E-03
70	GO:0006954: inflammatory response	1.21E-03
71	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.21E-03
72	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.21E-03
73	GO:0035436: triose phosphate transmembrane transport	1.21E-03
74	GO:0055114: oxidation-reduction process	1.63E-03
75	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.75E-03
76	GO:0070301: cellular response to hydrogen peroxide	1.75E-03
77	GO:0002239: response to oomycetes	1.75E-03
78	GO:0015696: ammonium transport	1.75E-03
79	GO:0080024: indolebutyric acid metabolic process	1.75E-03
80	GO:0001676: long-chain fatty acid metabolic process	1.75E-03
81	GO:0010150: leaf senescence	1.99E-03
82	GO:1901141: regulation of lignin biosynthetic process	2.35E-03
83	GO:0080037: negative regulation of cytokinin-activated signaling pathway	2.35E-03
84	GO:0010109: regulation of photosynthesis	2.35E-03
85	GO:0060548: negative regulation of cell death	2.35E-03
86	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.35E-03
87	GO:0072488: ammonium transmembrane transport	2.35E-03
88	GO:1901002: positive regulation of response to salt stress	2.35E-03
89	GO:0015713: phosphoglycerate transport	2.35E-03
90	GO:0015867: ATP transport	2.35E-03
91	GO:0006012: galactose metabolic process	2.52E-03
92	GO:0009693: ethylene biosynthetic process	2.52E-03
93	GO:0034052: positive regulation of plant-type hypersensitive response	3.00E-03
94	GO:2000762: regulation of phenylpropanoid metabolic process	3.00E-03
95	GO:0015866: ADP transport	3.71E-03
96	GO:0010256: endomembrane system organization	3.71E-03
97	GO:0033365: protein localization to organelle	3.71E-03
98	GO:0006574: valine catabolic process	3.71E-03
99	GO:0009759: indole glucosinolate biosynthetic process	3.71E-03
100	GO:0006623: protein targeting to vacuole	3.98E-03
101	GO:0009626: plant-type hypersensitive response	4.11E-03
102	GO:0002229: defense response to oomycetes	4.26E-03
103	GO:0010193: response to ozone	4.26E-03
104	GO:0006635: fatty acid beta-oxidation	4.26E-03
105	GO:0048444: floral organ morphogenesis	4.47E-03
106	GO:0009942: longitudinal axis specification	4.47E-03
107	GO:0009737: response to abscisic acid	4.81E-03
108	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.27E-03
109	GO:0043090: amino acid import	5.27E-03
110	GO:1900056: negative regulation of leaf senescence	5.27E-03
111	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	5.27E-03
112	GO:1902074: response to salt	5.27E-03
113	GO:0080167: response to karrikin	5.38E-03
114	GO:0010200: response to chitin	5.67E-03
115	GO:0006810: transport	5.81E-03
116	GO:0051607: defense response to virus	5.82E-03
117	GO:0044550: secondary metabolite biosynthetic process	6.11E-03
118	GO:0030091: protein repair	6.13E-03
119	GO:0009819: drought recovery	6.13E-03
120	GO:0009850: auxin metabolic process	6.13E-03
121	GO:0030162: regulation of proteolysis	6.13E-03
122	GO:0010208: pollen wall assembly	7.03E-03
123	GO:0006997: nucleus organization	7.03E-03
124	GO:0010204: defense response signaling pathway, resistance gene-independent	7.03E-03
125	GO:0009056: catabolic process	7.97E-03
126	GO:0015780: nucleotide-sugar transport	7.97E-03
127	GO:0007338: single fertilization	7.97E-03
128	GO:0006098: pentose-phosphate shunt	7.97E-03
129	GO:0019432: triglyceride biosynthetic process	7.97E-03
130	GO:0009813: flavonoid biosynthetic process	8.47E-03
131	GO:0009407: toxin catabolic process	8.89E-03
132	GO:0090332: stomatal closure	8.96E-03
133	GO:0048268: clathrin coat assembly	8.96E-03
134	GO:0008202: steroid metabolic process	8.96E-03
135	GO:0010629: negative regulation of gene expression	1.00E-02
136	GO:0051555: flavonol biosynthetic process	1.00E-02
137	GO:0019538: protein metabolic process	1.00E-02
138	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.00E-02
139	GO:0006032: chitin catabolic process	1.00E-02
140	GO:0009867: jasmonic acid mediated signaling pathway	1.02E-02
141	GO:0009684: indoleacetic acid biosynthetic process	1.11E-02
142	GO:0019684: photosynthesis, light reaction	1.11E-02
143	GO:0009089: lysine biosynthetic process via diaminopimelate	1.11E-02
144	GO:0006839: mitochondrial transport	1.17E-02
145	GO:0006897: endocytosis	1.22E-02
146	GO:0000266: mitochondrial fission	1.22E-02
147	GO:0006790: sulfur compound metabolic process	1.22E-02
148	GO:0012501: programmed cell death	1.22E-02
149	GO:0002213: defense response to insect	1.22E-02
150	GO:0007165: signal transduction	1.23E-02
151	GO:0002237: response to molecule of bacterial origin	1.45E-02
152	GO:0006855: drug transmembrane transport	1.54E-02
153	GO:0046854: phosphatidylinositol phosphorylation	1.58E-02
154	GO:0042343: indole glucosinolate metabolic process	1.58E-02
155	GO:0046688: response to copper ion	1.58E-02
156	GO:0090351: seedling development	1.58E-02
157	GO:0000162: tryptophan biosynthetic process	1.70E-02
158	GO:2000377: regulation of reactive oxygen species metabolic process	1.83E-02
159	GO:0006825: copper ion transport	1.96E-02
160	GO:0006874: cellular calcium ion homeostasis	1.96E-02
161	GO:0009695: jasmonic acid biosynthetic process	1.96E-02
162	GO:0098542: defense response to other organism	2.10E-02
163	GO:0016114: terpenoid biosynthetic process	2.10E-02
164	GO:0016998: cell wall macromolecule catabolic process	2.10E-02
165	GO:0009414: response to water deprivation	2.21E-02
166	GO:0016226: iron-sulfur cluster assembly	2.24E-02
167	GO:0009625: response to insect	2.38E-02
168	GO:0070417: cellular response to cold	2.68E-02
169	GO:0008284: positive regulation of cell proliferation	2.68E-02
170	GO:0006508: proteolysis	2.75E-02
171	GO:0000271: polysaccharide biosynthetic process	2.83E-02
172	GO:0000413: protein peptidyl-prolyl isomerization	2.83E-02
173	GO:0045489: pectin biosynthetic process	2.99E-02
174	GO:0006520: cellular amino acid metabolic process	2.99E-02
175	GO:0009646: response to absence of light	3.15E-02
176	GO:0009749: response to glucose	3.31E-02
177	GO:0071554: cell wall organization or biogenesis	3.47E-02
178	GO:0000302: response to reactive oxygen species	3.47E-02
179	GO:0019761: glucosinolate biosynthetic process	3.64E-02
180	GO:1901657: glycosyl compound metabolic process	3.81E-02
181	GO:0009567: double fertilization forming a zygote and endosperm	3.98E-02
182	GO:0006464: cellular protein modification process	3.98E-02
183	GO:0009615: response to virus	4.51E-02
184	GO:0010029: regulation of seed germination	4.69E-02
185	GO:0009816: defense response to bacterium, incompatible interaction	4.69E-02
186	GO:0009627: systemic acquired resistance	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
3	GO:0047681: aryl-alcohol dehydrogenase (NADP+) activity	0.00E+00
4	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
5	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
6	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
7	GO:0010178: IAA-amino acid conjugate hydrolase activity	4.18E-05
8	GO:0030552: cAMP binding	1.07E-04
9	GO:0030553: cGMP binding	1.07E-04
10	GO:0003714: transcription corepressor activity	1.47E-04
11	GO:0005216: ion channel activity	1.70E-04
12	GO:0016758: transferase activity, transferring hexosyl groups	2.03E-04
13	GO:0016229: steroid dehydrogenase activity	3.44E-04
14	GO:0010179: IAA-Ala conjugate hydrolase activity	3.44E-04
15	GO:2001227: quercitrin binding	3.44E-04
16	GO:0070401: NADP+ binding	3.44E-04
17	GO:0000386: second spliceosomal transesterification activity	3.44E-04
18	GO:2001147: camalexin binding	3.44E-04
19	GO:0015245: fatty acid transporter activity	3.44E-04
20	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.44E-04
21	GO:0016920: pyroglutamyl-peptidase activity	3.44E-04
22	GO:0005249: voltage-gated potassium channel activity	3.48E-04
23	GO:0030551: cyclic nucleotide binding	3.48E-04
24	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.72E-04
25	GO:0004033: aldo-keto reductase (NADP) activity	3.72E-04
26	GO:0016301: kinase activity	5.58E-04
27	GO:0008237: metallopeptidase activity	6.98E-04
28	GO:0010331: gibberellin binding	7.51E-04
29	GO:0047364: desulfoglucosinolate sulfotransferase activity	7.51E-04
30	GO:0015152: glucose-6-phosphate transmembrane transporter activity	7.51E-04
31	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	7.51E-04
32	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	7.51E-04
33	GO:0032934: sterol binding	7.51E-04
34	GO:0015036: disulfide oxidoreductase activity	7.51E-04
35	GO:0050736: O-malonyltransferase activity	7.51E-04
36	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.59E-04
37	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.59E-04
38	GO:0030247: polysaccharide binding	9.90E-04
39	GO:0004674: protein serine/threonine kinase activity	1.03E-03
40	GO:0071917: triose-phosphate transmembrane transporter activity	1.21E-03
41	GO:0005457: GDP-fucose transmembrane transporter activity	1.21E-03
42	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.21E-03
43	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.21E-03
44	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.21E-03
45	GO:0032403: protein complex binding	1.21E-03
46	GO:0001046: core promoter sequence-specific DNA binding	1.74E-03
47	GO:0017077: oxidative phosphorylation uncoupler activity	1.75E-03
48	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.75E-03
49	GO:0015297: antiporter activity	1.85E-03
50	GO:0035251: UDP-glucosyltransferase activity	2.11E-03
51	GO:0005509: calcium ion binding	2.11E-03
52	GO:0004834: tryptophan synthase activity	2.35E-03
53	GO:0003995: acyl-CoA dehydrogenase activity	2.35E-03
54	GO:0009916: alternative oxidase activity	2.35E-03
55	GO:0015120: phosphoglycerate transmembrane transporter activity	2.35E-03
56	GO:0008194: UDP-glycosyltransferase activity	2.36E-03
57	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.74E-03
58	GO:0018685: alkane 1-monooxygenase activity	3.00E-03
59	GO:0003997: acyl-CoA oxidase activity	3.00E-03
60	GO:0005496: steroid binding	3.00E-03
61	GO:0008519: ammonium transmembrane transporter activity	3.71E-03
62	GO:0019825: oxygen binding	3.90E-03
63	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.47E-03
64	GO:0015217: ADP transmembrane transporter activity	4.47E-03
65	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.47E-03
66	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.47E-03
67	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.47E-03
68	GO:0102391: decanoate--CoA ligase activity	4.47E-03
69	GO:0005261: cation channel activity	4.47E-03
70	GO:0004144: diacylglycerol O-acyltransferase activity	4.47E-03
71	GO:0005347: ATP transmembrane transporter activity	4.47E-03
72	GO:0003978: UDP-glucose 4-epimerase activity	4.47E-03
73	GO:0004467: long-chain fatty acid-CoA ligase activity	5.27E-03
74	GO:0102425: myricetin 3-O-glucosyltransferase activity	5.27E-03
75	GO:0102360: daphnetin 3-O-glucosyltransferase activity	5.27E-03
76	GO:0043295: glutathione binding	5.27E-03
77	GO:0004497: monooxygenase activity	5.38E-03
78	GO:0008483: transaminase activity	5.49E-03
79	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.49E-03
80	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.13E-03
81	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	6.13E-03
82	GO:0004034: aldose 1-epimerase activity	6.13E-03
83	GO:0052747: sinapyl alcohol dehydrogenase activity	6.13E-03
84	GO:0005544: calcium-dependent phospholipid binding	6.13E-03
85	GO:0043565: sequence-specific DNA binding	6.81E-03
86	GO:0008142: oxysterol binding	7.03E-03
87	GO:0030170: pyridoxal phosphate binding	7.30E-03
88	GO:0005506: iron ion binding	7.54E-03
89	GO:0042803: protein homodimerization activity	7.60E-03
90	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	7.96E-03
91	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.97E-03
92	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.81E-03
93	GO:0016740: transferase activity	9.66E-03
94	GO:0004568: chitinase activity	1.00E-02
95	GO:0005545: 1-phosphatidylinositol binding	1.00E-02
96	GO:0015020: glucuronosyltransferase activity	1.00E-02
97	GO:0004864: protein phosphatase inhibitor activity	1.00E-02
98	GO:0050661: NADP binding	1.17E-02
99	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.22E-02
100	GO:0004364: glutathione transferase activity	1.27E-02
101	GO:0005388: calcium-transporting ATPase activity	1.33E-02
102	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.33E-02
103	GO:0005315: inorganic phosphate transmembrane transporter activity	1.33E-02
104	GO:0005516: calmodulin binding	1.39E-02
105	GO:0016757: transferase activity, transferring glycosyl groups	1.43E-02
106	GO:0003712: transcription cofactor activity	1.58E-02
107	GO:0008146: sulfotransferase activity	1.58E-02
108	GO:0004970: ionotropic glutamate receptor activity	1.58E-02
109	GO:0005217: intracellular ligand-gated ion channel activity	1.58E-02
110	GO:0051536: iron-sulfur cluster binding	1.83E-02
111	GO:0031418: L-ascorbic acid binding	1.83E-02
112	GO:0020037: heme binding	1.88E-02
113	GO:0005524: ATP binding	2.00E-02
114	GO:0050660: flavin adenine dinucleotide binding	2.02E-02
115	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.24E-02
116	GO:0003727: single-stranded RNA binding	2.53E-02
117	GO:0005215: transporter activity	2.73E-02
118	GO:0030276: clathrin binding	2.99E-02
119	GO:0016853: isomerase activity	3.15E-02
120	GO:0046872: metal ion binding	3.77E-02
121	GO:0005507: copper ion binding	3.86E-02
122	GO:0016791: phosphatase activity	3.98E-02
123	GO:0016413: O-acetyltransferase activity	4.33E-02
124	GO:0004672: protein kinase activity	4.36E-02
125	GO:0051213: dioxygenase activity	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.80E-07
2	GO:0016021: integral component of membrane	6.32E-07
3	GO:0005794: Golgi apparatus	7.30E-04
4	GO:0005901: caveola	7.51E-04
5	GO:0031314: extrinsic component of mitochondrial inner membrane	7.51E-04
6	GO:0043231: intracellular membrane-bounded organelle	7.57E-04
7	GO:0005887: integral component of plasma membrane	1.14E-03
8	GO:0030658: transport vesicle membrane	1.75E-03
9	GO:0005743: mitochondrial inner membrane	2.20E-03
10	GO:0032586: protein storage vacuole membrane	2.35E-03
11	GO:0000813: ESCRT I complex	3.00E-03
12	GO:0000164: protein phosphatase type 1 complex	3.00E-03
13	GO:0005788: endoplasmic reticulum lumen	6.52E-03
14	GO:0000326: protein storage vacuole	7.03E-03
15	GO:0005779: integral component of peroxisomal membrane	7.03E-03
16	GO:0005777: peroxisome	8.69E-03
17	GO:0017119: Golgi transport complex	1.00E-02
18	GO:0005802: trans-Golgi network	1.55E-02
19	GO:0005789: endoplasmic reticulum membrane	1.76E-02
20	GO:0005768: endosome	1.93E-02
21	GO:0070469: respiratory chain	1.96E-02
22	GO:0005741: mitochondrial outer membrane	2.10E-02
23	GO:0005905: clathrin-coated pit	2.10E-02
24	GO:0030136: clathrin-coated vesicle	2.68E-02
25	GO:0009504: cell plate	3.31E-02
26	GO:0031965: nuclear membrane	3.31E-02
27	GO:0005774: vacuolar membrane	3.50E-02
28	GO:0009506: plasmodesma	3.96E-02
29	GO:0031225: anchored component of membrane	4.40E-02
30	GO:0016020: membrane	4.55E-02