Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900367: positive regulation of defense response to insect0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
4GO:0032491: detection of molecule of fungal origin0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:0010324: membrane invagination0.00E+00
7GO:0032499: detection of peptidoglycan0.00E+00
8GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
9GO:0071327: cellular response to trehalose stimulus0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
12GO:1902001: fatty acid transmembrane transport0.00E+00
13GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
14GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
15GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
16GO:0009312: oligosaccharide biosynthetic process0.00E+00
17GO:0009751: response to salicylic acid9.23E-06
18GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.57E-05
19GO:0042742: defense response to bacterium1.87E-05
20GO:0009737: response to abscisic acid4.66E-05
21GO:0071456: cellular response to hypoxia6.06E-05
22GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.07E-04
23GO:0045227: capsule polysaccharide biosynthetic process1.87E-04
24GO:0033358: UDP-L-arabinose biosynthetic process1.87E-04
25GO:0051707: response to other organism1.95E-04
26GO:0002237: response to molecule of bacterial origin2.93E-04
27GO:0006468: protein phosphorylation3.75E-04
28GO:0002238: response to molecule of fungal origin3.97E-04
29GO:0009643: photosynthetic acclimation3.97E-04
30GO:0010150: leaf senescence4.12E-04
31GO:0010200: response to chitin4.38E-04
32GO:0031930: mitochondria-nucleus signaling pathway5.28E-04
33GO:0006470: protein dephosphorylation5.43E-04
34GO:0033306: phytol metabolic process6.01E-04
35GO:1901183: positive regulation of camalexin biosynthetic process6.01E-04
36GO:0050691: regulation of defense response to virus by host6.01E-04
37GO:0042759: long-chain fatty acid biosynthetic process6.01E-04
38GO:0009968: negative regulation of signal transduction6.01E-04
39GO:1990542: mitochondrial transmembrane transport6.01E-04
40GO:0032107: regulation of response to nutrient levels6.01E-04
41GO:0048508: embryonic meristem development6.01E-04
42GO:0015760: glucose-6-phosphate transport6.01E-04
43GO:0046256: 2,4,6-trinitrotoluene catabolic process6.01E-04
44GO:0043547: positive regulation of GTPase activity6.01E-04
45GO:0019567: arabinose biosynthetic process6.01E-04
46GO:0015969: guanosine tetraphosphate metabolic process6.01E-04
47GO:0031348: negative regulation of defense response6.60E-04
48GO:0006012: galactose metabolic process7.38E-04
49GO:0009787: regulation of abscisic acid-activated signaling pathway8.40E-04
50GO:0006952: defense response1.01E-03
51GO:0006887: exocytosis1.01E-03
52GO:2000031: regulation of salicylic acid mediated signaling pathway1.02E-03
53GO:0010208: pollen wall assembly1.02E-03
54GO:0010112: regulation of systemic acquired resistance1.22E-03
55GO:0010115: regulation of abscisic acid biosynthetic process1.29E-03
56GO:0015865: purine nucleotide transport1.29E-03
57GO:0015908: fatty acid transport1.29E-03
58GO:0002240: response to molecule of oomycetes origin1.29E-03
59GO:0044419: interspecies interaction between organisms1.29E-03
60GO:0010271: regulation of chlorophyll catabolic process1.29E-03
61GO:0031349: positive regulation of defense response1.29E-03
62GO:0009945: radial axis specification1.29E-03
63GO:0019725: cellular homeostasis1.29E-03
64GO:0015712: hexose phosphate transport1.29E-03
65GO:0015012: heparan sulfate proteoglycan biosynthetic process1.29E-03
66GO:0051258: protein polymerization1.29E-03
67GO:0071668: plant-type cell wall assembly1.29E-03
68GO:0080183: response to photooxidative stress1.29E-03
69GO:0010155: regulation of proton transport1.29E-03
70GO:0010618: aerenchyma formation1.29E-03
71GO:0080181: lateral root branching1.29E-03
72GO:0006024: glycosaminoglycan biosynthetic process1.29E-03
73GO:0055088: lipid homeostasis1.29E-03
74GO:0009749: response to glucose1.32E-03
75GO:0009636: response to toxic substance1.37E-03
76GO:1900426: positive regulation of defense response to bacterium1.44E-03
77GO:0006032: chitin catabolic process1.69E-03
78GO:0006904: vesicle docking involved in exocytosis1.99E-03
79GO:0009414: response to water deprivation2.08E-03
80GO:0006954: inflammatory response2.13E-03
81GO:0010498: proteasomal protein catabolic process2.13E-03
82GO:0034051: negative regulation of plant-type hypersensitive response2.13E-03
83GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway2.13E-03
84GO:0035436: triose phosphate transmembrane transport2.13E-03
85GO:0080163: regulation of protein serine/threonine phosphatase activity2.13E-03
86GO:0045836: positive regulation of meiotic nuclear division2.13E-03
87GO:0006065: UDP-glucuronate biosynthetic process2.13E-03
88GO:0015783: GDP-fucose transport2.13E-03
89GO:0015692: lead ion transport2.13E-03
90GO:0052546: cell wall pectin metabolic process2.13E-03
91GO:0015695: organic cation transport2.13E-03
92GO:0015714: phosphoenolpyruvate transport2.13E-03
93GO:0080168: abscisic acid transport2.13E-03
94GO:1900055: regulation of leaf senescence2.13E-03
95GO:0010731: protein glutathionylation3.09E-03
96GO:0072583: clathrin-dependent endocytosis3.09E-03
97GO:0015696: ammonium transport3.09E-03
98GO:0071323: cellular response to chitin3.09E-03
99GO:0051289: protein homotetramerization3.09E-03
100GO:0046513: ceramide biosynthetic process3.09E-03
101GO:0046836: glycolipid transport3.09E-03
102GO:0010116: positive regulation of abscisic acid biosynthetic process3.09E-03
103GO:0046902: regulation of mitochondrial membrane permeability3.09E-03
104GO:0009225: nucleotide-sugar metabolic process3.22E-03
105GO:0009407: toxin catabolic process3.69E-03
106GO:0080147: root hair cell development3.99E-03
107GO:0009863: salicylic acid mediated signaling pathway3.99E-03
108GO:2000377: regulation of reactive oxygen species metabolic process3.99E-03
109GO:0015713: phosphoglycerate transport4.17E-03
110GO:0080142: regulation of salicylic acid biosynthetic process4.17E-03
111GO:0010109: regulation of photosynthesis4.17E-03
112GO:0060548: negative regulation of cell death4.17E-03
113GO:0072488: ammonium transmembrane transport4.17E-03
114GO:0071219: cellular response to molecule of bacterial origin4.17E-03
115GO:0009867: jasmonic acid mediated signaling pathway4.41E-03
116GO:0016998: cell wall macromolecule catabolic process4.85E-03
117GO:0034052: positive regulation of plant-type hypersensitive response5.35E-03
118GO:0009229: thiamine diphosphate biosynthetic process5.35E-03
119GO:0018344: protein geranylgeranylation5.35E-03
120GO:0010225: response to UV-C5.35E-03
121GO:0009247: glycolipid biosynthetic process5.35E-03
122GO:0045927: positive regulation of growth5.35E-03
123GO:0006897: endocytosis5.50E-03
124GO:0009625: response to insect5.81E-03
125GO:0009306: protein secretion6.32E-03
126GO:0033365: protein localization to organelle6.64E-03
127GO:0010337: regulation of salicylic acid metabolic process6.64E-03
128GO:0006574: valine catabolic process6.64E-03
129GO:0009228: thiamine biosynthetic process6.64E-03
130GO:0009759: indole glucosinolate biosynthetic process6.64E-03
131GO:0010942: positive regulation of cell death6.64E-03
132GO:0050832: defense response to fungus6.97E-03
133GO:0006855: drug transmembrane transport7.44E-03
134GO:0031347: regulation of defense response7.80E-03
135GO:0009942: longitudinal axis specification8.02E-03
136GO:0009423: chorismate biosynthetic process8.02E-03
137GO:0010310: regulation of hydrogen peroxide metabolic process8.02E-03
138GO:0071470: cellular response to osmotic stress8.02E-03
139GO:0042372: phylloquinone biosynthetic process8.02E-03
140GO:0007166: cell surface receptor signaling pathway8.83E-03
141GO:1900057: positive regulation of leaf senescence9.51E-03
142GO:0000122: negative regulation of transcription from RNA polymerase II promoter9.51E-03
143GO:0050829: defense response to Gram-negative bacterium9.51E-03
144GO:1902074: response to salt9.51E-03
145GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway9.51E-03
146GO:0046470: phosphatidylcholine metabolic process9.51E-03
147GO:0071446: cellular response to salicylic acid stimulus9.51E-03
148GO:1900056: negative regulation of leaf senescence9.51E-03
149GO:0010193: response to ozone9.92E-03
150GO:0007264: small GTPase mediated signal transduction1.06E-02
151GO:0009611: response to wounding1.07E-02
152GO:0009408: response to heat1.10E-02
153GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.11E-02
154GO:0009819: drought recovery1.11E-02
155GO:0043068: positive regulation of programmed cell death1.11E-02
156GO:0019375: galactolipid biosynthetic process1.11E-02
157GO:0031540: regulation of anthocyanin biosynthetic process1.11E-02
158GO:0010928: regulation of auxin mediated signaling pathway1.11E-02
159GO:0009626: plant-type hypersensitive response1.20E-02
160GO:0009753: response to jasmonic acid1.24E-02
161GO:0010120: camalexin biosynthetic process1.27E-02
162GO:0010204: defense response signaling pathway, resistance gene-independent1.27E-02
163GO:0009624: response to nematode1.41E-02
164GO:0006098: pentose-phosphate shunt1.45E-02
165GO:0046916: cellular transition metal ion homeostasis1.45E-02
166GO:0019432: triglyceride biosynthetic process1.45E-02
167GO:0015780: nucleotide-sugar transport1.45E-02
168GO:0007338: single fertilization1.45E-02
169GO:0010029: regulation of seed germination1.53E-02
170GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.53E-02
171GO:0006906: vesicle fusion1.61E-02
172GO:0048268: clathrin coat assembly1.63E-02
173GO:0010380: regulation of chlorophyll biosynthetic process1.63E-02
174GO:0008202: steroid metabolic process1.63E-02
175GO:0043067: regulation of programmed cell death1.63E-02
176GO:0006950: response to stress1.70E-02
177GO:0009870: defense response signaling pathway, resistance gene-dependent1.82E-02
178GO:0051555: flavonol biosynthetic process1.82E-02
179GO:0009089: lysine biosynthetic process via diaminopimelate2.02E-02
180GO:0009073: aromatic amino acid family biosynthetic process2.02E-02
181GO:0009684: indoleacetic acid biosynthetic process2.02E-02
182GO:0019684: photosynthesis, light reaction2.02E-02
183GO:0006499: N-terminal protein myristoylation2.08E-02
184GO:0046777: protein autophosphorylation2.14E-02
185GO:0007568: aging2.18E-02
186GO:0010119: regulation of stomatal movement2.18E-02
187GO:0002213: defense response to insect2.22E-02
188GO:0010105: negative regulation of ethylene-activated signaling pathway2.22E-02
189GO:0045037: protein import into chloroplast stroma2.22E-02
190GO:0000266: mitochondrial fission2.22E-02
191GO:2000028: regulation of photoperiodism, flowering2.44E-02
192GO:0018107: peptidyl-threonine phosphorylation2.44E-02
193GO:0055046: microgametogenesis2.44E-02
194GO:0006829: zinc II ion transport2.44E-02
195GO:0015031: protein transport2.57E-02
196GO:0007034: vacuolar transport2.66E-02
197GO:0009266: response to temperature stimulus2.66E-02
198GO:0034605: cellular response to heat2.66E-02
199GO:0009738: abscisic acid-activated signaling pathway2.76E-02
200GO:0046688: response to copper ion2.88E-02
201GO:0010167: response to nitrate2.88E-02
202GO:0046854: phosphatidylinositol phosphorylation2.88E-02
203GO:0009409: response to cold2.92E-02
204GO:0000162: tryptophan biosynthetic process3.11E-02
205GO:0035556: intracellular signal transduction3.20E-02
206GO:0045333: cellular respiration3.35E-02
207GO:0006825: copper ion transport3.60E-02
208GO:0051321: meiotic cell cycle3.85E-02
209GO:0009269: response to desiccation3.85E-02
210GO:0006812: cation transport3.87E-02
211GO:0042538: hyperosmotic salinity response3.87E-02
212GO:2000022: regulation of jasmonic acid mediated signaling pathway4.10E-02
213GO:0010017: red or far-red light signaling pathway4.10E-02
214GO:0009814: defense response, incompatible interaction4.10E-02
215GO:0006486: protein glycosylation4.16E-02
216GO:0055085: transmembrane transport4.33E-02
217GO:0042127: regulation of cell proliferation4.63E-02
218GO:0009561: megagametogenesis4.63E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
3GO:0004107: chorismate synthase activity0.00E+00
4GO:2001080: chitosan binding0.00E+00
5GO:0005212: structural constituent of eye lens0.00E+00
6GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
7GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
8GO:0003978: UDP-glucose 4-epimerase activity1.91E-05
9GO:0016301: kinase activity3.15E-05
10GO:0004568: chitinase activity1.36E-04
11GO:0050373: UDP-arabinose 4-epimerase activity1.87E-04
12GO:0043565: sequence-specific DNA binding3.24E-04
13GO:0008375: acetylglucosaminyltransferase activity4.23E-04
14GO:0019707: protein-cysteine S-acyltransferase activity6.01E-04
15GO:2001147: camalexin binding6.01E-04
16GO:0046481: digalactosyldiacylglycerol synthase activity6.01E-04
17GO:0015245: fatty acid transporter activity6.01E-04
18GO:0010285: L,L-diaminopimelate aminotransferase activity6.01E-04
19GO:0032050: clathrin heavy chain binding6.01E-04
20GO:2001227: quercitrin binding6.01E-04
21GO:0004662: CAAX-protein geranylgeranyltransferase activity6.01E-04
22GO:0004674: protein serine/threonine kinase activity6.45E-04
23GO:0043295: glutathione binding6.75E-04
24GO:0032934: sterol binding1.29E-03
25GO:0015036: disulfide oxidoreductase activity1.29E-03
26GO:0008728: GTP diphosphokinase activity1.29E-03
27GO:0050736: O-malonyltransferase activity1.29E-03
28GO:0048531: beta-1,3-galactosyltransferase activity1.29E-03
29GO:0050291: sphingosine N-acyltransferase activity1.29E-03
30GO:0047364: desulfoglucosinolate sulfotransferase activity1.29E-03
31GO:0015152: glucose-6-phosphate transmembrane transporter activity1.29E-03
32GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.29E-03
33GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.29E-03
34GO:0019901: protein kinase binding1.32E-03
35GO:0005509: calcium ion binding1.80E-03
36GO:0008559: xenobiotic-transporting ATPase activity1.95E-03
37GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.99E-03
38GO:0032403: protein complex binding2.13E-03
39GO:0071917: triose-phosphate transmembrane transporter activity2.13E-03
40GO:0005457: GDP-fucose transmembrane transporter activity2.13E-03
41GO:0003979: UDP-glucose 6-dehydrogenase activity2.13E-03
42GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity2.13E-03
43GO:0004324: ferredoxin-NADP+ reductase activity2.13E-03
44GO:0016531: copper chaperone activity2.13E-03
45GO:0004722: protein serine/threonine phosphatase activity2.63E-03
46GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.68E-03
47GO:0035250: UDP-galactosyltransferase activity3.09E-03
48GO:0017077: oxidative phosphorylation uncoupler activity3.09E-03
49GO:0017089: glycolipid transporter activity3.09E-03
50GO:0035529: NADH pyrophosphatase activity3.09E-03
51GO:0001046: core promoter sequence-specific DNA binding3.99E-03
52GO:0019199: transmembrane receptor protein kinase activity4.17E-03
53GO:0009916: alternative oxidase activity4.17E-03
54GO:0004930: G-protein coupled receptor activity4.17E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity4.17E-03
56GO:0004834: tryptophan synthase activity4.17E-03
57GO:0051861: glycolipid binding4.17E-03
58GO:0005524: ATP binding4.61E-03
59GO:0005496: steroid binding5.35E-03
60GO:0047631: ADP-ribose diphosphatase activity5.35E-03
61GO:0005471: ATP:ADP antiporter activity5.35E-03
62GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.35E-03
63GO:0004364: glutathione transferase activity5.80E-03
64GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.46E-03
65GO:0000210: NAD+ diphosphatase activity6.64E-03
66GO:0008519: ammonium transmembrane transporter activity6.64E-03
67GO:0015297: antiporter activity6.70E-03
68GO:0051287: NAD binding7.80E-03
69GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity8.02E-03
70GO:0004144: diacylglycerol O-acyltransferase activity8.02E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity8.02E-03
72GO:0016757: transferase activity, transferring glycosyl groups1.02E-02
73GO:0004033: aldo-keto reductase (NADP) activity1.11E-02
74GO:0004708: MAP kinase kinase activity1.11E-02
75GO:0004714: transmembrane receptor protein tyrosine kinase activity1.11E-02
76GO:0047893: flavonol 3-O-glucosyltransferase activity1.11E-02
77GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.27E-02
78GO:0004430: 1-phosphatidylinositol 4-kinase activity1.27E-02
79GO:0008142: oxysterol binding1.27E-02
80GO:0004630: phospholipase D activity1.27E-02
81GO:0016740: transferase activity1.51E-02
82GO:0005515: protein binding1.52E-02
83GO:0047617: acyl-CoA hydrolase activity1.63E-02
84GO:0016758: transferase activity, transferring hexosyl groups1.81E-02
85GO:0004864: protein phosphatase inhibitor activity1.82E-02
86GO:0004713: protein tyrosine kinase activity1.82E-02
87GO:0005545: 1-phosphatidylinositol binding1.82E-02
88GO:0015020: glucuronosyltransferase activity1.82E-02
89GO:0015238: drug transmembrane transporter activity1.98E-02
90GO:0005543: phospholipid binding2.02E-02
91GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.44E-02
92GO:0005315: inorganic phosphate transmembrane transporter activity2.44E-02
93GO:0000149: SNARE binding2.62E-02
94GO:0008061: chitin binding2.88E-02
95GO:0008146: sulfotransferase activity2.88E-02
96GO:0030552: cAMP binding2.88E-02
97GO:0030553: cGMP binding2.88E-02
98GO:0005484: SNAP receptor activity3.09E-02
99GO:0008194: UDP-glycosyltransferase activity3.23E-02
100GO:0031418: L-ascorbic acid binding3.35E-02
101GO:0003954: NADH dehydrogenase activity3.35E-02
102GO:0004672: protein kinase activity3.44E-02
103GO:0008324: cation transmembrane transporter activity3.60E-02
104GO:0043424: protein histidine kinase binding3.60E-02
105GO:0005216: ion channel activity3.60E-02
106GO:0033612: receptor serine/threonine kinase binding3.85E-02
107GO:0019706: protein-cysteine S-palmitoyltransferase activity3.85E-02
108GO:0035251: UDP-glucosyltransferase activity3.85E-02
109GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.10E-02
110GO:0004499: N,N-dimethylaniline monooxygenase activity4.63E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane3.17E-08
2GO:0005886: plasma membrane6.40E-07
3GO:0005901: caveola1.57E-05
4GO:0005794: Golgi apparatus2.62E-04
5GO:0000813: ESCRT I complex2.84E-04
6GO:0000164: protein phosphatase type 1 complex2.84E-04
7GO:0005953: CAAX-protein geranylgeranyltransferase complex6.01E-04
8GO:0000138: Golgi trans cisterna6.01E-04
9GO:0031314: extrinsic component of mitochondrial inner membrane1.29E-03
10GO:0031304: intrinsic component of mitochondrial inner membrane1.29E-03
11GO:0008287: protein serine/threonine phosphatase complex2.13E-03
12GO:0030139: endocytic vesicle2.13E-03
13GO:0070062: extracellular exosome3.09E-03
14GO:0005789: endoplasmic reticulum membrane6.54E-03
15GO:0005743: mitochondrial inner membrane9.67E-03
16GO:0000145: exocyst1.06E-02
17GO:0032580: Golgi cisterna membrane1.20E-02
18GO:0030125: clathrin vesicle coat1.82E-02
19GO:0005740: mitochondrial envelope1.82E-02
20GO:0000325: plant-type vacuole2.18E-02
21GO:0005774: vacuolar membrane2.29E-02
22GO:0005802: trans-Golgi network2.52E-02
23GO:0031902: late endosome membrane2.85E-02
24GO:0031201: SNARE complex2.85E-02
25GO:0005795: Golgi stack2.88E-02
26GO:0000139: Golgi membrane2.92E-02
27GO:0005769: early endosome3.11E-02
28GO:0005768: endosome3.20E-02
29GO:0005758: mitochondrial intermembrane space3.35E-02
30GO:0070469: respiratory chain3.60E-02
31GO:0005777: peroxisome3.67E-02
32GO:0005741: mitochondrial outer membrane3.85E-02
33GO:0005905: clathrin-coated pit3.85E-02
34GO:0043231: intracellular membrane-bounded organelle3.96E-02
35GO:0030136: clathrin-coated vesicle4.90E-02
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Gene type



Gene DE type