GO Enrichment Analysis of Co-expressed Genes with
AT3G45850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 2 | GO:0046396: D-galacturonate metabolic process | 0.00E+00 |
| 3 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 4 | GO:0010569: regulation of double-strand break repair via homologous recombination | 7.28E-07 |
| 5 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 4.28E-05 |
| 6 | GO:0007389: pattern specification process | 9.46E-05 |
| 7 | GO:0043971: histone H3-K18 acetylation | 1.20E-04 |
| 8 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.20E-04 |
| 9 | GO:0051171: regulation of nitrogen compound metabolic process | 1.20E-04 |
| 10 | GO:0080175: phragmoplast microtubule organization | 2.77E-04 |
| 11 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 2.77E-04 |
| 12 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.77E-04 |
| 13 | GO:0080188: RNA-directed DNA methylation | 3.30E-04 |
| 14 | GO:0006013: mannose metabolic process | 4.58E-04 |
| 15 | GO:0010255: glucose mediated signaling pathway | 6.57E-04 |
| 16 | GO:1902290: positive regulation of defense response to oomycetes | 6.57E-04 |
| 17 | GO:0015846: polyamine transport | 8.72E-04 |
| 18 | GO:0002229: defense response to oomycetes | 9.78E-04 |
| 19 | GO:0016558: protein import into peroxisome matrix | 1.10E-03 |
| 20 | GO:0051225: spindle assembly | 1.10E-03 |
| 21 | GO:0010252: auxin homeostasis | 1.17E-03 |
| 22 | GO:0009959: negative gravitropism | 1.35E-03 |
| 23 | GO:0009451: RNA modification | 1.46E-03 |
| 24 | GO:0046835: carbohydrate phosphorylation | 1.61E-03 |
| 25 | GO:0009942: longitudinal axis specification | 1.61E-03 |
| 26 | GO:0048444: floral organ morphogenesis | 1.61E-03 |
| 27 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 1.89E-03 |
| 28 | GO:0006401: RNA catabolic process | 1.89E-03 |
| 29 | GO:0009610: response to symbiotic fungus | 1.89E-03 |
| 30 | GO:0044030: regulation of DNA methylation | 2.50E-03 |
| 31 | GO:0006002: fructose 6-phosphate metabolic process | 2.50E-03 |
| 32 | GO:0006468: protein phosphorylation | 2.67E-03 |
| 33 | GO:0009821: alkaloid biosynthetic process | 2.82E-03 |
| 34 | GO:0009926: auxin polar transport | 2.93E-03 |
| 35 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.16E-03 |
| 36 | GO:0008202: steroid metabolic process | 3.16E-03 |
| 37 | GO:1900426: positive regulation of defense response to bacterium | 3.16E-03 |
| 38 | GO:0016485: protein processing | 3.88E-03 |
| 39 | GO:0009934: regulation of meristem structural organization | 5.04E-03 |
| 40 | GO:0051726: regulation of cell cycle | 5.91E-03 |
| 41 | GO:0007010: cytoskeleton organization | 6.32E-03 |
| 42 | GO:0010187: negative regulation of seed germination | 6.32E-03 |
| 43 | GO:0051302: regulation of cell division | 6.76E-03 |
| 44 | GO:0006306: DNA methylation | 7.22E-03 |
| 45 | GO:0006012: galactose metabolic process | 8.18E-03 |
| 46 | GO:0006284: base-excision repair | 8.66E-03 |
| 47 | GO:0007623: circadian rhythm | 9.64E-03 |
| 48 | GO:0000271: polysaccharide biosynthetic process | 9.68E-03 |
| 49 | GO:0010051: xylem and phloem pattern formation | 9.68E-03 |
| 50 | GO:0045489: pectin biosynthetic process | 1.02E-02 |
| 51 | GO:0048868: pollen tube development | 1.02E-02 |
| 52 | GO:0006342: chromatin silencing | 1.02E-02 |
| 53 | GO:0009741: response to brassinosteroid | 1.02E-02 |
| 54 | GO:0006635: fatty acid beta-oxidation | 1.18E-02 |
| 55 | GO:0051301: cell division | 1.22E-02 |
| 56 | GO:0010583: response to cyclopentenone | 1.24E-02 |
| 57 | GO:0031047: gene silencing by RNA | 1.24E-02 |
| 58 | GO:0009639: response to red or far red light | 1.36E-02 |
| 59 | GO:0010027: thylakoid membrane organization | 1.54E-02 |
| 60 | GO:0016126: sterol biosynthetic process | 1.54E-02 |
| 61 | GO:0007049: cell cycle | 1.67E-02 |
| 62 | GO:0009832: plant-type cell wall biogenesis | 1.92E-02 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.92E-02 |
| 64 | GO:0007568: aging | 2.05E-02 |
| 65 | GO:0009910: negative regulation of flower development | 2.05E-02 |
| 66 | GO:0016051: carbohydrate biosynthetic process | 2.19E-02 |
| 67 | GO:0009853: photorespiration | 2.19E-02 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 2.39E-02 |
| 69 | GO:0048364: root development | 2.86E-02 |
| 70 | GO:0006260: DNA replication | 3.01E-02 |
| 71 | GO:0031347: regulation of defense response | 3.01E-02 |
| 72 | GO:0008152: metabolic process | 3.02E-02 |
| 73 | GO:0006364: rRNA processing | 3.25E-02 |
| 74 | GO:0006096: glycolytic process | 3.66E-02 |
| 75 | GO:0043086: negative regulation of catalytic activity | 3.66E-02 |
| 76 | GO:0009734: auxin-activated signaling pathway | 3.86E-02 |
| 77 | GO:0009740: gibberellic acid mediated signaling pathway | 4.00E-02 |
| 78 | GO:0009553: embryo sac development | 4.09E-02 |
| 79 | GO:0009555: pollen development | 4.84E-02 |
| 80 | GO:0009416: response to light stimulus | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047912: galacturonokinase activity | 0.00E+00 |
| 2 | GO:0019808: polyamine binding | 0.00E+00 |
| 3 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 5 | GO:0016871: cycloartenol synthase activity | 0.00E+00 |
| 6 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 1.20E-04 |
| 7 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 1.20E-04 |
| 8 | GO:0009672: auxin:proton symporter activity | 1.41E-04 |
| 9 | GO:0010329: auxin efflux transmembrane transporter activity | 2.59E-04 |
| 10 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 2.77E-04 |
| 11 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 2.77E-04 |
| 12 | GO:0030267: glyoxylate reductase (NADP) activity | 4.58E-04 |
| 13 | GO:0000254: C-4 methylsterol oxidase activity | 6.57E-04 |
| 14 | GO:0010385: double-stranded methylated DNA binding | 8.72E-04 |
| 15 | GO:0004335: galactokinase activity | 8.72E-04 |
| 16 | GO:0004674: protein serine/threonine kinase activity | 9.13E-04 |
| 17 | GO:0019901: protein kinase binding | 9.17E-04 |
| 18 | GO:0016301: kinase activity | 9.79E-04 |
| 19 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.10E-03 |
| 20 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.61E-03 |
| 21 | GO:0004559: alpha-mannosidase activity | 1.61E-03 |
| 22 | GO:0003872: 6-phosphofructokinase activity | 1.89E-03 |
| 23 | GO:0019899: enzyme binding | 1.89E-03 |
| 24 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.99E-03 |
| 25 | GO:0008142: oxysterol binding | 2.50E-03 |
| 26 | GO:0005524: ATP binding | 2.75E-03 |
| 27 | GO:0016844: strictosidine synthase activity | 3.16E-03 |
| 28 | GO:0004713: protein tyrosine kinase activity | 3.51E-03 |
| 29 | GO:0015020: glucuronosyltransferase activity | 3.51E-03 |
| 30 | GO:0008327: methyl-CpG binding | 3.88E-03 |
| 31 | GO:0009982: pseudouridine synthase activity | 4.64E-03 |
| 32 | GO:0000175: 3'-5'-exoribonuclease activity | 4.64E-03 |
| 33 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 5.10E-03 |
| 34 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 5.10E-03 |
| 35 | GO:0004857: enzyme inhibitor activity | 6.32E-03 |
| 36 | GO:0016758: transferase activity, transferring hexosyl groups | 6.80E-03 |
| 37 | GO:0004540: ribonuclease activity | 7.22E-03 |
| 38 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.69E-03 |
| 39 | GO:0004402: histone acetyltransferase activity | 9.68E-03 |
| 40 | GO:0008080: N-acetyltransferase activity | 1.02E-02 |
| 41 | GO:0001085: RNA polymerase II transcription factor binding | 1.02E-02 |
| 42 | GO:0008194: UDP-glycosyltransferase activity | 1.08E-02 |
| 43 | GO:0016757: transferase activity, transferring glycosyl groups | 1.38E-02 |
| 44 | GO:0008237: metallopeptidase activity | 1.41E-02 |
| 45 | GO:0004806: triglyceride lipase activity | 1.72E-02 |
| 46 | GO:0008236: serine-type peptidase activity | 1.79E-02 |
| 47 | GO:0004222: metalloendopeptidase activity | 1.99E-02 |
| 48 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.05E-02 |
| 49 | GO:0003993: acid phosphatase activity | 2.26E-02 |
| 50 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.33E-02 |
| 51 | GO:0042393: histone binding | 2.41E-02 |
| 52 | GO:0035091: phosphatidylinositol binding | 2.78E-02 |
| 53 | GO:0043621: protein self-association | 2.78E-02 |
| 54 | GO:0004519: endonuclease activity | 2.98E-02 |
| 55 | GO:0051287: NAD binding | 3.01E-02 |
| 56 | GO:0005215: transporter activity | 3.03E-02 |
| 57 | GO:0051082: unfolded protein binding | 4.17E-02 |
| 58 | GO:0004672: protein kinase activity | 4.29E-02 |
| 59 | GO:0046872: metal ion binding | 4.30E-02 |
| 60 | GO:0019843: rRNA binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042597: periplasmic space | 0.00E+00 |
| 2 | GO:0005655: nucleolar ribonuclease P complex | 4.28E-05 |
| 3 | GO:0010370: perinucleolar chromocenter | 1.20E-04 |
| 4 | GO:0070652: HAUS complex | 4.58E-04 |
| 5 | GO:0000178: exosome (RNase complex) | 1.10E-03 |
| 6 | GO:0005945: 6-phosphofructokinase complex | 1.10E-03 |
| 7 | GO:0010005: cortical microtubule, transverse to long axis | 1.61E-03 |
| 8 | GO:0005819: spindle | 2.48E-03 |
| 9 | GO:0005720: nuclear heterochromatin | 2.82E-03 |
| 10 | GO:0009507: chloroplast | 4.61E-03 |
| 11 | GO:0043231: intracellular membrane-bounded organelle | 5.99E-03 |
| 12 | GO:0045271: respiratory chain complex I | 6.76E-03 |
| 13 | GO:0009524: phragmoplast | 7.36E-03 |
| 14 | GO:0000932: P-body | 1.54E-02 |
| 15 | GO:0005667: transcription factor complex | 1.66E-02 |
| 16 | GO:0031977: thylakoid lumen | 2.48E-02 |
| 17 | GO:0031966: mitochondrial membrane | 3.09E-02 |
| 18 | GO:0005747: mitochondrial respiratory chain complex I | 3.74E-02 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 4.89E-02 |