co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010966: regulation of phosphate transport	0.00E+00
2	GO:0010190: cytochrome b6f complex assembly	2.33E-06
3	GO:0000481: maturation of 5S rRNA	2.53E-05
4	GO:0071461: cellular response to redox state	2.53E-05
5	GO:0034337: RNA folding	2.53E-05
6	GO:0080005: photosystem stoichiometry adjustment	6.44E-05
7	GO:0000913: preprophase band assembly	1.13E-04
8	GO:0031022: nuclear migration along microfilament	1.13E-04
9	GO:2001141: regulation of RNA biosynthetic process	1.69E-04
10	GO:0080170: hydrogen peroxide transmembrane transport	1.69E-04
11	GO:0030104: water homeostasis	2.30E-04
12	GO:0006811: ion transport	2.81E-04
13	GO:0043097: pyrimidine nucleoside salvage	2.95E-04
14	GO:0009904: chloroplast accumulation movement	2.95E-04
15	GO:0006206: pyrimidine nucleobase metabolic process	3.65E-04
16	GO:0006555: methionine metabolic process	3.65E-04
17	GO:0009903: chloroplast avoidance movement	4.36E-04
18	GO:0009645: response to low light intensity stimulus	5.11E-04
19	GO:0032508: DNA duplex unwinding	5.89E-04
20	GO:0071482: cellular response to light stimulus	6.69E-04
21	GO:0006754: ATP biosynthetic process	7.52E-04
22	GO:0000902: cell morphogenesis	7.52E-04
23	GO:0035999: tetrahydrofolate interconversion	8.38E-04
24	GO:0006352: DNA-templated transcription, initiation	1.01E-03
25	GO:0018119: peptidyl-cysteine S-nitrosylation	1.01E-03
26	GO:0009684: indoleacetic acid biosynthetic process	1.01E-03
27	GO:0009767: photosynthetic electron transport chain	1.20E-03
28	GO:0006413: translational initiation	1.22E-03
29	GO:0019253: reductive pentose-phosphate cycle	1.30E-03
30	GO:0010207: photosystem II assembly	1.30E-03
31	GO:0009768: photosynthesis, light harvesting in photosystem I	1.72E-03
32	GO:0006730: one-carbon metabolic process	1.95E-03
33	GO:0006817: phosphate ion transport	2.18E-03
34	GO:0070417: cellular response to cold	2.30E-03
35	GO:0034220: ion transmembrane transport	2.42E-03
36	GO:0000226: microtubule cytoskeleton organization	2.42E-03
37	GO:0006662: glycerol ether metabolic process	2.55E-03
38	GO:0007018: microtubule-based movement	2.68E-03
39	GO:0009409: response to cold	2.95E-03
40	GO:0010583: response to cyclopentenone	3.07E-03
41	GO:0016032: viral process	3.07E-03
42	GO:0007264: small GTPase mediated signal transduction	3.07E-03
43	GO:0071805: potassium ion transmembrane transport	3.48E-03
44	GO:0000910: cytokinesis	3.63E-03
45	GO:0010411: xyloglucan metabolic process	4.21E-03
46	GO:0018298: protein-chromophore linkage	4.52E-03
47	GO:0010119: regulation of stomatal movement	4.99E-03
48	GO:0034599: cellular response to oxidative stress	5.47E-03
49	GO:0009416: response to light stimulus	6.37E-03
50	GO:0042546: cell wall biogenesis	6.50E-03
51	GO:0009644: response to high light intensity	6.67E-03
52	GO:0006813: potassium ion transport	7.78E-03
53	GO:0009909: regulation of flower development	8.35E-03
54	GO:0009058: biosynthetic process	1.21E-02
55	GO:0042742: defense response to bacterium	1.29E-02
56	GO:0071555: cell wall organization	1.29E-02
57	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.58E-02
58	GO:0006810: transport	1.90E-02
59	GO:0005975: carbohydrate metabolic process	1.97E-02
60	GO:0009658: chloroplast organization	1.99E-02
61	GO:0009860: pollen tube growth	2.10E-02
62	GO:0010200: response to chitin	2.38E-02
63	GO:0044550: secondary metabolite biosynthetic process	2.47E-02
64	GO:0015979: photosynthesis	2.55E-02
65	GO:0045454: cell redox homeostasis	2.64E-02
66	GO:0008152: metabolic process	3.29E-02
67	GO:0009735: response to cytokinin	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0008974: phosphoribulokinase activity	0.00E+00
3	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
4	GO:0000293: ferric-chelate reductase activity	2.33E-06
5	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	2.53E-05
6	GO:0080045: quercetin 3'-O-glucosyltransferase activity	6.44E-05
7	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.30E-04
8	GO:0001053: plastid sigma factor activity	2.30E-04
9	GO:0016987: sigma factor activity	2.30E-04
10	GO:0004040: amidase activity	2.95E-04
11	GO:0080046: quercetin 4'-O-glucosyltransferase activity	3.65E-04
12	GO:0004849: uridine kinase activity	4.36E-04
13	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	7.52E-04
14	GO:0005315: inorganic phosphate transmembrane transporter activity	1.20E-03
15	GO:0031072: heat shock protein binding	1.20E-03
16	GO:0004565: beta-galactosidase activity	1.20E-03
17	GO:0031409: pigment binding	1.50E-03
18	GO:0015079: potassium ion transmembrane transporter activity	1.72E-03
19	GO:0047134: protein-disulfide reductase activity	2.30E-03
20	GO:0004791: thioredoxin-disulfide reductase activity	2.68E-03
21	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.94E-03
22	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.21E-03
23	GO:0003924: GTPase activity	3.61E-03
24	GO:0015250: water channel activity	3.77E-03
25	GO:0016168: chlorophyll binding	3.91E-03
26	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.21E-03
27	GO:0003993: acid phosphatase activity	5.47E-03
28	GO:0016887: ATPase activity	5.57E-03
29	GO:0015293: symporter activity	6.85E-03
30	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	7.78E-03
31	GO:0003777: microtubule motor activity	8.35E-03
32	GO:0004650: polygalacturonase activity	9.34E-03
33	GO:0080043: quercetin 3-O-glucosyltransferase activity	9.34E-03
34	GO:0080044: quercetin 7-O-glucosyltransferase activity	9.34E-03
35	GO:0022857: transmembrane transporter activity	9.54E-03
36	GO:0051082: unfolded protein binding	9.95E-03
37	GO:0015035: protein disulfide oxidoreductase activity	1.02E-02
38	GO:0005525: GTP binding	1.05E-02
39	GO:0030170: pyridoxal phosphate binding	1.25E-02
40	GO:0008017: microtubule binding	1.51E-02
41	GO:0008194: UDP-glycosyltransferase activity	1.58E-02
42	GO:0003743: translation initiation factor activity	1.63E-02
43	GO:0016491: oxidoreductase activity	1.71E-02
44	GO:0061630: ubiquitin protein ligase activity	2.41E-02
45	GO:0042803: protein homodimerization activity	2.73E-02
46	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	9.83E-08
2	GO:0009782: photosystem I antenna complex	2.53E-05
3	GO:0043674: columella	2.53E-05
4	GO:0009941: chloroplast envelope	1.14E-04
5	GO:0009535: chloroplast thylakoid membrane	1.64E-04
6	GO:0016021: integral component of membrane	3.75E-04
7	GO:0042807: central vacuole	5.11E-04
8	GO:0016020: membrane	5.15E-04
9	GO:0032040: small-subunit processome	1.11E-03
10	GO:0030076: light-harvesting complex	1.40E-03
11	GO:0005871: kinesin complex	2.30E-03
12	GO:0009504: cell plate	2.80E-03
13	GO:0005694: chromosome	3.07E-03
14	GO:0010319: stromule	3.48E-03
15	GO:0009570: chloroplast stroma	5.18E-03
16	GO:0005819: spindle	5.64E-03
17	GO:0031977: thylakoid lumen	5.98E-03
18	GO:0005886: plasma membrane	6.24E-03
19	GO:0009706: chloroplast inner membrane	9.95E-03
20	GO:0005802: trans-Golgi network	1.02E-02
21	GO:0048046: apoplast	1.03E-02
22	GO:0010287: plastoglobule	1.12E-02
23	GO:0005768: endosome	1.16E-02
24	GO:0009543: chloroplast thylakoid lumen	1.17E-02
25	GO:0005623: cell	1.19E-02
26	GO:0009524: phragmoplast	1.21E-02
27	GO:0009705: plant-type vacuole membrane	1.46E-02
28	GO:0005773: vacuole	1.67E-02
29	GO:0000139: Golgi membrane	1.75E-02
30	GO:0005730: nucleolus	2.19E-02
31	GO:0005874: microtubule	2.27E-02
32	GO:0031969: chloroplast membrane	2.32E-02
33	GO:0043231: intracellular membrane-bounded organelle	3.29E-02
34	GO:0005887: integral component of plasma membrane	3.82E-02
35	GO:0005774: vacuolar membrane	4.47E-02