co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006511: ubiquitin-dependent protein catabolic process	5.98E-06
2	GO:0006144: purine nucleobase metabolic process	6.71E-06
3	GO:0019628: urate catabolic process	6.71E-06
4	GO:0006695: cholesterol biosynthetic process	1.83E-05
5	GO:0010372: positive regulation of gibberellin biosynthetic process	1.83E-05
6	GO:0010359: regulation of anion channel activity	3.35E-05
7	GO:0090630: activation of GTPase activity	3.35E-05
8	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.20E-04
9	GO:0043248: proteasome assembly	1.20E-04
10	GO:0018105: peptidyl-serine phosphorylation	1.60E-04
11	GO:0006402: mRNA catabolic process	2.03E-04
12	GO:0034605: cellular response to heat	4.66E-04
13	GO:0007031: peroxisome organization	5.02E-04
14	GO:0006406: mRNA export from nucleus	5.76E-04
15	GO:0030433: ubiquitin-dependent ERAD pathway	6.92E-04
16	GO:0010227: floral organ abscission	7.31E-04
17	GO:0009306: protein secretion	7.72E-04
18	GO:0008360: regulation of cell shape	8.97E-04
19	GO:0016132: brassinosteroid biosynthetic process	1.02E-03
20	GO:0031047: gene silencing by RNA	1.07E-03
21	GO:0009651: response to salt stress	1.17E-03
22	GO:0016579: protein deubiquitination	1.25E-03
23	GO:0016126: sterol biosynthetic process	1.30E-03
24	GO:0006499: N-terminal protein myristoylation	1.65E-03
25	GO:0010119: regulation of stomatal movement	1.70E-03
26	GO:0000724: double-strand break repair via homologous recombination	1.76E-03
27	GO:0006897: endocytosis	2.03E-03
28	GO:0051603: proteolysis involved in cellular protein catabolic process	2.68E-03
29	GO:0009739: response to gibberellin	5.20E-03
30	GO:0007166: cell surface receptor signaling pathway	5.28E-03
31	GO:0009826: unidimensional cell growth	6.33E-03
32	GO:0046777: protein autophosphorylation	7.91E-03
33	GO:0044550: secondary metabolite biosynthetic process	8.01E-03
34	GO:0009751: response to salicylic acid	9.82E-03
35	GO:0006397: mRNA processing	1.02E-02
36	GO:0009753: response to jasmonic acid	1.04E-02
37	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.21E-02
38	GO:0009738: abscisic acid-activated signaling pathway	1.45E-02
39	GO:0035556: intracellular signal transduction	1.55E-02
40	GO:0055114: oxidation-reduction process	1.91E-02
41	GO:0006468: protein phosphorylation	1.99E-02
42	GO:0042742: defense response to bacterium	2.46E-02
43	GO:0030154: cell differentiation	2.61E-02
44	GO:0015031: protein transport	2.92E-02
45	GO:0009409: response to cold	3.05E-02
46	GO:0046686: response to cadmium ion	3.37E-02
47	GO:0016310: phosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
2	GO:0009918: sterol delta7 reductase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	8.15E-06
5	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.17E-05
6	GO:0036402: proteasome-activating ATPase activity	1.20E-04
7	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.28E-04
8	GO:0004175: endopeptidase activity	4.66E-04
9	GO:0017025: TBP-class protein binding	5.02E-04
10	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	6.53E-04
11	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.02E-03
12	GO:0004518: nuclease activity	1.07E-03
13	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.40E-03
14	GO:0004683: calmodulin-dependent protein kinase activity	1.45E-03
15	GO:0005096: GTPase activator activity	1.60E-03
16	GO:0005516: calmodulin binding	1.93E-03
17	GO:0005509: calcium ion binding	2.39E-03
18	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.59E-03
19	GO:0008233: peptidase activity	7.46E-03
20	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	8.56E-03
21	GO:0016301: kinase activity	8.91E-03
22	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.03E-03
23	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	9.23E-03
24	GO:0003924: GTPase activity	9.92E-03
25	GO:0004674: protein serine/threonine kinase activity	1.26E-02
26	GO:0016887: ATPase activity	1.35E-02
27	GO:0030246: carbohydrate binding	1.84E-02
28	GO:0019825: oxygen binding	1.91E-02
29	GO:0005524: ATP binding	1.92E-02
30	GO:0005525: GTP binding	2.12E-02
31	GO:0005506: iron ion binding	2.43E-02
32	GO:0044212: transcription regulatory region DNA binding	2.46E-02
33	GO:0004672: protein kinase activity	3.23E-02
34	GO:0003729: mRNA binding	3.27E-02
35	GO:0020037: heme binding	3.40E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	1.09E-08
2	GO:0016442: RISC complex	6.71E-06
3	GO:0005839: proteasome core complex	8.15E-06
4	GO:0005829: cytosol	1.08E-04
5	GO:0031597: cytosolic proteasome complex	1.46E-04
6	GO:0031595: nuclear proteasome complex	1.74E-04
7	GO:0019773: proteasome core complex, alpha-subunit complex	2.33E-04
8	GO:0010494: cytoplasmic stress granule	2.64E-04
9	GO:0008540: proteasome regulatory particle, base subcomplex	2.95E-04
10	GO:0048471: perinuclear region of cytoplasm	3.61E-04
11	GO:0008541: proteasome regulatory particle, lid subcomplex	3.61E-04
12	GO:0030176: integral component of endoplasmic reticulum membrane	5.02E-04
13	GO:0005886: plasma membrane	1.10E-03
14	GO:0000932: P-body	1.30E-03
15	GO:0005635: nuclear envelope	2.74E-03
16	GO:0005634: nucleus	6.91E-03
17	GO:0005618: cell wall	1.01E-02
18	GO:0005773: vacuole	1.36E-02
19	GO:0005777: peroxisome	1.64E-02
20	GO:0005783: endoplasmic reticulum	1.80E-02
21	GO:0005802: trans-Golgi network	2.08E-02
22	GO:0005768: endosome	2.28E-02
23	GO:0005789: endoplasmic reticulum membrane	3.33E-02
24	GO:0009506: plasmodesma	3.41E-02
25	GO:0016020: membrane	3.83E-02
26	GO:0005794: Golgi apparatus	4.61E-02