| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 5 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 6 | GO:0006573: valine metabolic process | 0.00E+00 |
| 7 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 8 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 9 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 10 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 11 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 12 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 13 | GO:0071000: response to magnetism | 0.00E+00 |
| 14 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 15 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 16 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 17 | GO:0010081: regulation of inflorescence meristem growth | 0.00E+00 |
| 18 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 19 | GO:0033528: S-methylmethionine cycle | 0.00E+00 |
| 20 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 21 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 22 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 23 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 24 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 25 | GO:0000373: Group II intron splicing | 6.89E-06 |
| 26 | GO:0009451: RNA modification | 8.61E-06 |
| 27 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.42E-05 |
| 28 | GO:0009793: embryo development ending in seed dormancy | 2.78E-05 |
| 29 | GO:1900871: chloroplast mRNA modification | 2.91E-05 |
| 30 | GO:0071482: cellular response to light stimulus | 1.28E-04 |
| 31 | GO:0010239: chloroplast mRNA processing | 1.89E-04 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 1.89E-04 |
| 33 | GO:0009658: chloroplast organization | 2.02E-04 |
| 34 | GO:1900865: chloroplast RNA modification | 2.18E-04 |
| 35 | GO:0080110: sporopollenin biosynthetic process | 4.69E-04 |
| 36 | GO:0010207: photosystem II assembly | 5.62E-04 |
| 37 | GO:0016554: cytidine to uridine editing | 6.50E-04 |
| 38 | GO:0043087: regulation of GTPase activity | 8.35E-04 |
| 39 | GO:2000021: regulation of ion homeostasis | 8.35E-04 |
| 40 | GO:0035987: endodermal cell differentiation | 8.35E-04 |
| 41 | GO:0090558: plant epidermis development | 8.35E-04 |
| 42 | GO:0043609: regulation of carbon utilization | 8.35E-04 |
| 43 | GO:0006436: tryptophanyl-tRNA aminoacylation | 8.35E-04 |
| 44 | GO:0070574: cadmium ion transmembrane transport | 8.35E-04 |
| 45 | GO:0051247: positive regulation of protein metabolic process | 8.35E-04 |
| 46 | GO:0090548: response to nitrate starvation | 8.35E-04 |
| 47 | GO:0000066: mitochondrial ornithine transport | 8.35E-04 |
| 48 | GO:1902458: positive regulation of stomatal opening | 8.35E-04 |
| 49 | GO:1902025: nitrate import | 8.35E-04 |
| 50 | GO:2000905: negative regulation of starch metabolic process | 8.35E-04 |
| 51 | GO:0009090: homoserine biosynthetic process | 8.35E-04 |
| 52 | GO:0070509: calcium ion import | 8.35E-04 |
| 53 | GO:0034757: negative regulation of iron ion transport | 8.35E-04 |
| 54 | GO:0043489: RNA stabilization | 8.35E-04 |
| 55 | GO:0006419: alanyl-tRNA aminoacylation | 8.35E-04 |
| 56 | GO:0000012: single strand break repair | 8.35E-04 |
| 57 | GO:0043266: regulation of potassium ion transport | 8.35E-04 |
| 58 | GO:0042659: regulation of cell fate specification | 8.35E-04 |
| 59 | GO:0010063: positive regulation of trichoblast fate specification | 8.35E-04 |
| 60 | GO:0010080: regulation of floral meristem growth | 8.35E-04 |
| 61 | GO:0006551: leucine metabolic process | 8.35E-04 |
| 62 | GO:0072387: flavin adenine dinucleotide metabolic process | 8.35E-04 |
| 63 | GO:0042372: phylloquinone biosynthetic process | 8.59E-04 |
| 64 | GO:0051510: regulation of unidimensional cell growth | 1.09E-03 |
| 65 | GO:0000105: histidine biosynthetic process | 1.36E-03 |
| 66 | GO:0046620: regulation of organ growth | 1.36E-03 |
| 67 | GO:0006353: DNA-templated transcription, termination | 1.36E-03 |
| 68 | GO:0048564: photosystem I assembly | 1.36E-03 |
| 69 | GO:0032544: plastid translation | 1.66E-03 |
| 70 | GO:0016117: carotenoid biosynthetic process | 1.70E-03 |
| 71 | GO:0009786: regulation of asymmetric cell division | 1.81E-03 |
| 72 | GO:0001682: tRNA 5'-leader removal | 1.81E-03 |
| 73 | GO:0006435: threonyl-tRNA aminoacylation | 1.81E-03 |
| 74 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.81E-03 |
| 75 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 1.81E-03 |
| 76 | GO:0051214: RNA virus induced gene silencing | 1.81E-03 |
| 77 | GO:0010024: phytochromobilin biosynthetic process | 1.81E-03 |
| 78 | GO:0006420: arginyl-tRNA aminoacylation | 1.81E-03 |
| 79 | GO:0010617: circadian regulation of calcium ion oscillation | 1.81E-03 |
| 80 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.81E-03 |
| 81 | GO:0010271: regulation of chlorophyll catabolic process | 1.81E-03 |
| 82 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.81E-03 |
| 83 | GO:1901529: positive regulation of anion channel activity | 1.81E-03 |
| 84 | GO:0099402: plant organ development | 1.81E-03 |
| 85 | GO:0060359: response to ammonium ion | 1.81E-03 |
| 86 | GO:0048255: mRNA stabilization | 1.81E-03 |
| 87 | GO:0001736: establishment of planar polarity | 1.81E-03 |
| 88 | GO:0080009: mRNA methylation | 1.81E-03 |
| 89 | GO:0008033: tRNA processing | 1.89E-03 |
| 90 | GO:0048507: meristem development | 2.00E-03 |
| 91 | GO:0009086: methionine biosynthetic process | 2.37E-03 |
| 92 | GO:0048829: root cap development | 2.77E-03 |
| 93 | GO:0030422: production of siRNA involved in RNA interference | 2.77E-03 |
| 94 | GO:0006788: heme oxidation | 3.00E-03 |
| 95 | GO:0043157: response to cation stress | 3.00E-03 |
| 96 | GO:0010022: meristem determinacy | 3.00E-03 |
| 97 | GO:0005977: glycogen metabolic process | 3.00E-03 |
| 98 | GO:0030029: actin filament-based process | 3.00E-03 |
| 99 | GO:1901672: positive regulation of systemic acquired resistance | 3.00E-03 |
| 100 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.00E-03 |
| 101 | GO:0080117: secondary growth | 3.00E-03 |
| 102 | GO:0048586: regulation of long-day photoperiodism, flowering | 3.00E-03 |
| 103 | GO:0045910: negative regulation of DNA recombination | 3.00E-03 |
| 104 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 3.00E-03 |
| 105 | GO:0010623: programmed cell death involved in cell development | 3.00E-03 |
| 106 | GO:0090708: specification of plant organ axis polarity | 3.00E-03 |
| 107 | GO:1902448: positive regulation of shade avoidance | 3.00E-03 |
| 108 | GO:0006696: ergosterol biosynthetic process | 3.00E-03 |
| 109 | GO:0006000: fructose metabolic process | 3.00E-03 |
| 110 | GO:0090153: regulation of sphingolipid biosynthetic process | 3.00E-03 |
| 111 | GO:0006352: DNA-templated transcription, initiation | 3.21E-03 |
| 112 | GO:0045037: protein import into chloroplast stroma | 3.69E-03 |
| 113 | GO:0010582: floral meristem determinacy | 3.69E-03 |
| 114 | GO:0051607: defense response to virus | 4.08E-03 |
| 115 | GO:0006094: gluconeogenesis | 4.20E-03 |
| 116 | GO:0042989: sequestering of actin monomers | 4.37E-03 |
| 117 | GO:0031048: chromatin silencing by small RNA | 4.37E-03 |
| 118 | GO:0009067: aspartate family amino acid biosynthetic process | 4.37E-03 |
| 119 | GO:1990019: protein storage vacuole organization | 4.37E-03 |
| 120 | GO:0010071: root meristem specification | 4.37E-03 |
| 121 | GO:0009800: cinnamic acid biosynthetic process | 4.37E-03 |
| 122 | GO:0051513: regulation of monopolar cell growth | 4.37E-03 |
| 123 | GO:0007231: osmosensory signaling pathway | 4.37E-03 |
| 124 | GO:0009226: nucleotide-sugar biosynthetic process | 4.37E-03 |
| 125 | GO:0009102: biotin biosynthetic process | 4.37E-03 |
| 126 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 4.37E-03 |
| 127 | GO:0046739: transport of virus in multicellular host | 4.37E-03 |
| 128 | GO:1901332: negative regulation of lateral root development | 4.37E-03 |
| 129 | GO:0051639: actin filament network formation | 4.37E-03 |
| 130 | GO:2000904: regulation of starch metabolic process | 4.37E-03 |
| 131 | GO:0034059: response to anoxia | 4.37E-03 |
| 132 | GO:0044211: CTP salvage | 4.37E-03 |
| 133 | GO:0019048: modulation by virus of host morphology or physiology | 4.37E-03 |
| 134 | GO:0070588: calcium ion transmembrane transport | 5.34E-03 |
| 135 | GO:0016311: dephosphorylation | 5.80E-03 |
| 136 | GO:0051567: histone H3-K9 methylation | 5.92E-03 |
| 137 | GO:0010508: positive regulation of autophagy | 5.92E-03 |
| 138 | GO:0008295: spermidine biosynthetic process | 5.92E-03 |
| 139 | GO:0044206: UMP salvage | 5.92E-03 |
| 140 | GO:0030104: water homeostasis | 5.92E-03 |
| 141 | GO:0033500: carbohydrate homeostasis | 5.92E-03 |
| 142 | GO:0051781: positive regulation of cell division | 5.92E-03 |
| 143 | GO:0051764: actin crosslink formation | 5.92E-03 |
| 144 | GO:0042274: ribosomal small subunit biogenesis | 5.92E-03 |
| 145 | GO:0048442: sepal development | 5.92E-03 |
| 146 | GO:0006021: inositol biosynthetic process | 5.92E-03 |
| 147 | GO:0051322: anaphase | 5.92E-03 |
| 148 | GO:0006661: phosphatidylinositol biosynthetic process | 5.92E-03 |
| 149 | GO:2000306: positive regulation of photomorphogenesis | 5.92E-03 |
| 150 | GO:1902347: response to strigolactone | 5.92E-03 |
| 151 | GO:0010021: amylopectin biosynthetic process | 5.92E-03 |
| 152 | GO:0007010: cytoskeleton organization | 6.62E-03 |
| 153 | GO:0051017: actin filament bundle assembly | 6.62E-03 |
| 154 | GO:0016123: xanthophyll biosynthetic process | 7.62E-03 |
| 155 | GO:0030041: actin filament polymerization | 7.62E-03 |
| 156 | GO:0010117: photoprotection | 7.62E-03 |
| 157 | GO:0010158: abaxial cell fate specification | 7.62E-03 |
| 158 | GO:0032876: negative regulation of DNA endoreduplication | 7.62E-03 |
| 159 | GO:0046283: anthocyanin-containing compound metabolic process | 7.62E-03 |
| 160 | GO:0010236: plastoquinone biosynthetic process | 7.62E-03 |
| 161 | GO:1901371: regulation of leaf morphogenesis | 9.47E-03 |
| 162 | GO:0006559: L-phenylalanine catabolic process | 9.47E-03 |
| 163 | GO:0006206: pyrimidine nucleobase metabolic process | 9.47E-03 |
| 164 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 9.47E-03 |
| 165 | GO:0060918: auxin transport | 9.47E-03 |
| 166 | GO:0048831: regulation of shoot system development | 9.47E-03 |
| 167 | GO:0010190: cytochrome b6f complex assembly | 9.47E-03 |
| 168 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.47E-03 |
| 169 | GO:0009959: negative gravitropism | 9.47E-03 |
| 170 | GO:0016458: gene silencing | 9.47E-03 |
| 171 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 9.47E-03 |
| 172 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.67E-03 |
| 173 | GO:0010584: pollen exine formation | 1.05E-02 |
| 174 | GO:0009088: threonine biosynthetic process | 1.15E-02 |
| 175 | GO:1901259: chloroplast rRNA processing | 1.15E-02 |
| 176 | GO:0009648: photoperiodism | 1.15E-02 |
| 177 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.15E-02 |
| 178 | GO:2000067: regulation of root morphogenesis | 1.15E-02 |
| 179 | GO:0010076: maintenance of floral meristem identity | 1.15E-02 |
| 180 | GO:0009082: branched-chain amino acid biosynthetic process | 1.15E-02 |
| 181 | GO:0017148: negative regulation of translation | 1.15E-02 |
| 182 | GO:0048509: regulation of meristem development | 1.15E-02 |
| 183 | GO:0009099: valine biosynthetic process | 1.15E-02 |
| 184 | GO:0030488: tRNA methylation | 1.15E-02 |
| 185 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.15E-02 |
| 186 | GO:0009926: auxin polar transport | 1.17E-02 |
| 187 | GO:0009790: embryo development | 1.20E-02 |
| 188 | GO:0010087: phloem or xylem histogenesis | 1.24E-02 |
| 189 | GO:0010182: sugar mediated signaling pathway | 1.34E-02 |
| 190 | GO:0010305: leaf vascular tissue pattern formation | 1.34E-02 |
| 191 | GO:0009958: positive gravitropism | 1.34E-02 |
| 192 | GO:0045489: pectin biosynthetic process | 1.34E-02 |
| 193 | GO:0010098: suspensor development | 1.36E-02 |
| 194 | GO:0006955: immune response | 1.36E-02 |
| 195 | GO:0009395: phospholipid catabolic process | 1.36E-02 |
| 196 | GO:0048528: post-embryonic root development | 1.36E-02 |
| 197 | GO:0006400: tRNA modification | 1.36E-02 |
| 198 | GO:0010050: vegetative phase change | 1.36E-02 |
| 199 | GO:0048437: floral organ development | 1.36E-02 |
| 200 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.36E-02 |
| 201 | GO:0015693: magnesium ion transport | 1.36E-02 |
| 202 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.42E-02 |
| 203 | GO:0040008: regulation of growth | 1.45E-02 |
| 204 | GO:0010492: maintenance of shoot apical meristem identity | 1.59E-02 |
| 205 | GO:0055075: potassium ion homeostasis | 1.59E-02 |
| 206 | GO:0042255: ribosome assembly | 1.59E-02 |
| 207 | GO:0070413: trehalose metabolism in response to stress | 1.59E-02 |
| 208 | GO:0006875: cellular metal ion homeostasis | 1.59E-02 |
| 209 | GO:0009850: auxin metabolic process | 1.59E-02 |
| 210 | GO:0032875: regulation of DNA endoreduplication | 1.59E-02 |
| 211 | GO:2000070: regulation of response to water deprivation | 1.59E-02 |
| 212 | GO:0045010: actin nucleation | 1.59E-02 |
| 213 | GO:0009734: auxin-activated signaling pathway | 1.75E-02 |
| 214 | GO:0007264: small GTPase mediated signal transduction | 1.77E-02 |
| 215 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.83E-02 |
| 216 | GO:0009657: plastid organization | 1.83E-02 |
| 217 | GO:0006002: fructose 6-phosphate metabolic process | 1.83E-02 |
| 218 | GO:0015996: chlorophyll catabolic process | 1.83E-02 |
| 219 | GO:0009097: isoleucine biosynthetic process | 1.83E-02 |
| 220 | GO:0009827: plant-type cell wall modification | 1.83E-02 |
| 221 | GO:0007186: G-protein coupled receptor signaling pathway | 1.83E-02 |
| 222 | GO:0007166: cell surface receptor signaling pathway | 1.90E-02 |
| 223 | GO:0009828: plant-type cell wall loosening | 2.01E-02 |
| 224 | GO:0000902: cell morphogenesis | 2.08E-02 |
| 225 | GO:0010206: photosystem II repair | 2.08E-02 |
| 226 | GO:0006098: pentose-phosphate shunt | 2.08E-02 |
| 227 | GO:0048316: seed development | 2.20E-02 |
| 228 | GO:0005975: carbohydrate metabolic process | 2.26E-02 |
| 229 | GO:1900426: positive regulation of defense response to bacterium | 2.34E-02 |
| 230 | GO:0010267: production of ta-siRNAs involved in RNA interference | 2.34E-02 |
| 231 | GO:2000280: regulation of root development | 2.34E-02 |
| 232 | GO:0016571: histone methylation | 2.34E-02 |
| 233 | GO:0009638: phototropism | 2.34E-02 |
| 234 | GO:0009098: leucine biosynthetic process | 2.34E-02 |
| 235 | GO:0010018: far-red light signaling pathway | 2.34E-02 |
| 236 | GO:0016573: histone acetylation | 2.34E-02 |
| 237 | GO:0010027: thylakoid membrane organization | 2.40E-02 |
| 238 | GO:0009733: response to auxin | 2.51E-02 |
| 239 | GO:0010029: regulation of seed germination | 2.54E-02 |
| 240 | GO:0048441: petal development | 2.62E-02 |
| 241 | GO:0006298: mismatch repair | 2.62E-02 |
| 242 | GO:0006949: syncytium formation | 2.62E-02 |
| 243 | GO:0009299: mRNA transcription | 2.62E-02 |
| 244 | GO:0006259: DNA metabolic process | 2.62E-02 |
| 245 | GO:0031627: telomeric loop formation | 2.62E-02 |
| 246 | GO:0006535: cysteine biosynthetic process from serine | 2.62E-02 |
| 247 | GO:0009416: response to light stimulus | 2.70E-02 |
| 248 | GO:0006396: RNA processing | 2.77E-02 |
| 249 | GO:0006397: mRNA processing | 2.81E-02 |
| 250 | GO:0048765: root hair cell differentiation | 2.90E-02 |
| 251 | GO:0010216: maintenance of DNA methylation | 2.90E-02 |
| 252 | GO:0006415: translational termination | 2.90E-02 |
| 253 | GO:0006265: DNA topological change | 2.90E-02 |
| 254 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.90E-02 |
| 255 | GO:0043085: positive regulation of catalytic activity | 2.90E-02 |
| 256 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.90E-02 |
| 257 | GO:0006816: calcium ion transport | 2.90E-02 |
| 258 | GO:0048481: plant ovule development | 3.14E-02 |
| 259 | GO:0018298: protein-chromophore linkage | 3.14E-02 |
| 260 | GO:0006790: sulfur compound metabolic process | 3.20E-02 |
| 261 | GO:0010311: lateral root formation | 3.30E-02 |
| 262 | GO:0000160: phosphorelay signal transduction system | 3.30E-02 |
| 263 | GO:0030036: actin cytoskeleton organization | 3.51E-02 |
| 264 | GO:0009785: blue light signaling pathway | 3.51E-02 |
| 265 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.51E-02 |
| 266 | GO:0010075: regulation of meristem growth | 3.51E-02 |
| 267 | GO:0009725: response to hormone | 3.51E-02 |
| 268 | GO:0009691: cytokinin biosynthetic process | 3.51E-02 |
| 269 | GO:0009910: negative regulation of flower development | 3.63E-02 |
| 270 | GO:0006865: amino acid transport | 3.80E-02 |
| 271 | GO:0009266: response to temperature stimulus | 3.82E-02 |
| 272 | GO:0006302: double-strand break repair | 3.82E-02 |
| 273 | GO:0048440: carpel development | 3.82E-02 |
| 274 | GO:0009637: response to blue light | 3.98E-02 |
| 275 | GO:0046854: phosphatidylinositol phosphorylation | 4.14E-02 |
| 276 | GO:0007275: multicellular organism development | 4.14E-02 |
| 277 | GO:0090351: seedling development | 4.14E-02 |
| 278 | GO:0010030: positive regulation of seed germination | 4.14E-02 |
| 279 | GO:0006833: water transport | 4.48E-02 |
| 280 | GO:0042753: positive regulation of circadian rhythm | 4.48E-02 |
| 281 | GO:0000162: tryptophan biosynthetic process | 4.48E-02 |
| 282 | GO:0006839: mitochondrial transport | 4.53E-02 |
| 283 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.82E-02 |
| 284 | GO:0030150: protein import into mitochondrial matrix | 4.82E-02 |
| 285 | GO:0006338: chromatin remodeling | 4.82E-02 |
| 286 | GO:0005992: trehalose biosynthetic process | 4.82E-02 |
| 287 | GO:0019344: cysteine biosynthetic process | 4.82E-02 |
| 288 | GO:0006289: nucleotide-excision repair | 4.82E-02 |