co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G30280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006849: plasma membrane pyruvate transport	0.00E+00
2	GO:0015742: alpha-ketoglutarate transport	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
6	GO:0009658: chloroplast organization	1.74E-05
7	GO:0043007: maintenance of rDNA	3.25E-05
8	GO:0005980: glycogen catabolic process	3.25E-05
9	GO:0007093: mitotic cell cycle checkpoint	3.25E-05
10	GO:0006418: tRNA aminoacylation for protein translation	7.49E-05
11	GO:0051304: chromosome separation	8.18E-05
12	GO:0009662: etioplast organization	8.18E-05
13	GO:0090342: regulation of cell aging	8.18E-05
14	GO:0009405: pathogenesis	1.42E-04
15	GO:0006814: sodium ion transport	1.57E-04
16	GO:0043572: plastid fission	2.11E-04
17	GO:0015729: oxaloacetate transport	2.11E-04
18	GO:0010601: positive regulation of auxin biosynthetic process	2.11E-04
19	GO:0046739: transport of virus in multicellular host	2.11E-04
20	GO:0019676: ammonia assimilation cycle	2.85E-04
21	GO:0015743: malate transport	2.85E-04
22	GO:0071423: malate transmembrane transport	3.65E-04
23	GO:0010304: PSII associated light-harvesting complex II catabolic process	4.48E-04
24	GO:0000470: maturation of LSU-rRNA	4.48E-04
25	GO:0042793: transcription from plastid promoter	4.48E-04
26	GO:0010310: regulation of hydrogen peroxide metabolic process	5.36E-04
27	GO:1901259: chloroplast rRNA processing	5.36E-04
28	GO:0048437: floral organ development	6.27E-04
29	GO:0015031: protein transport	7.13E-04
30	GO:0048564: photosystem I assembly	7.22E-04
31	GO:0005978: glycogen biosynthetic process	7.22E-04
32	GO:0006353: DNA-templated transcription, termination	7.22E-04
33	GO:0010497: plasmodesmata-mediated intercellular transport	8.20E-04
34	GO:0010206: photosystem II repair	9.20E-04
35	GO:0006783: heme biosynthetic process	9.20E-04
36	GO:0010205: photoinhibition	1.02E-03
37	GO:0031425: chloroplast RNA processing	1.02E-03
38	GO:0010629: negative regulation of gene expression	1.13E-03
39	GO:0006782: protoporphyrinogen IX biosynthetic process	1.13E-03
40	GO:0006820: anion transport	1.36E-03
41	GO:0009266: response to temperature stimulus	1.60E-03
42	GO:0010020: chloroplast fission	1.60E-03
43	GO:0080188: RNA-directed DNA methylation	1.72E-03
44	GO:0006508: proteolysis	2.68E-03
45	GO:0019252: starch biosynthetic process	3.47E-03
46	GO:0009556: microsporogenesis	3.47E-03
47	GO:0030163: protein catabolic process	3.97E-03
48	GO:0010027: thylakoid membrane organization	4.67E-03
49	GO:0006906: vesicle fusion	5.04E-03
50	GO:0015995: chlorophyll biosynthetic process	5.22E-03
51	GO:0048481: plant ovule development	5.60E-03
52	GO:0006499: N-terminal protein myristoylation	5.99E-03
53	GO:0006887: exocytosis	7.43E-03
54	GO:0006897: endocytosis	7.43E-03
55	GO:0009735: response to cytokinin	8.00E-03
56	GO:0035556: intracellular signal transduction	9.24E-03
57	GO:0006364: rRNA processing	9.69E-03
58	GO:0006857: oligopeptide transport	1.02E-02
59	GO:0009553: embryo sac development	1.22E-02
60	GO:0009624: response to nematode	1.24E-02
61	GO:0009790: embryo development	1.62E-02
62	GO:0006633: fatty acid biosynthetic process	1.71E-02
63	GO:0046777: protein autophosphorylation	3.05E-02
64	GO:0015979: photosynthesis	3.20E-02
65	GO:0016042: lipid catabolic process	3.76E-02
66	GO:0006281: DNA repair	3.84E-02
67	GO:0006397: mRNA processing	3.96E-02
68	GO:0009793: embryo development ending in seed dormancy	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
2	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
3	GO:0008237: metallopeptidase activity	5.90E-06
4	GO:0004222: metalloendopeptidase activity	1.34E-05
5	GO:0008184: glycogen phosphorylase activity	3.25E-05
6	GO:0004853: uroporphyrinogen decarboxylase activity	3.25E-05
7	GO:0004645: phosphorylase activity	3.25E-05
8	GO:0015367: oxoglutarate:malate antiporter activity	8.18E-05
9	GO:0004176: ATP-dependent peptidase activity	8.34E-05
10	GO:0004812: aminoacyl-tRNA ligase activity	1.23E-04
11	GO:0002161: aminoacyl-tRNA editing activity	1.42E-04
12	GO:0050833: pyruvate transmembrane transporter activity	1.42E-04
13	GO:0090729: toxin activity	1.42E-04
14	GO:0008508: bile acid:sodium symporter activity	2.11E-04
15	GO:0015131: oxaloacetate transmembrane transporter activity	2.11E-04
16	GO:0008878: glucose-1-phosphate adenylyltransferase activity	2.85E-04
17	GO:0004629: phospholipase C activity	4.48E-04
18	GO:0004435: phosphatidylinositol phospholipase C activity	5.36E-04
19	GO:0015140: malate transmembrane transporter activity	6.27E-04
20	GO:0008327: methyl-CpG binding	1.24E-03
21	GO:0000049: tRNA binding	1.36E-03
22	GO:0005525: GTP binding	2.32E-03
23	GO:0005215: transporter activity	3.43E-03
24	GO:0000149: SNARE binding	7.01E-03
25	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.01E-03
26	GO:0016887: ATPase activity	7.64E-03
27	GO:0005484: SNAP receptor activity	7.87E-03
28	GO:0005524: ATP binding	1.08E-02
29	GO:0019843: rRNA binding	1.46E-02
30	GO:0004252: serine-type endopeptidase activity	1.57E-02
31	GO:0030170: pyridoxal phosphate binding	1.57E-02
32	GO:0008168: methyltransferase activity	2.43E-02
33	GO:0000287: magnesium ion binding	2.46E-02
34	GO:0004871: signal transducer activity	3.42E-02
35	GO:0003735: structural constituent of ribosome	3.54E-02
36	GO:0003924: GTPase activity	3.84E-02
37	GO:0003723: RNA binding	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
2	GO:0009507: chloroplast	2.12E-11
3	GO:0009570: chloroplast stroma	6.83E-09
4	GO:0009941: chloroplast envelope	2.07E-08
5	GO:0009706: chloroplast inner membrane	4.03E-08
6	GO:0009534: chloroplast thylakoid	1.87E-05
7	GO:0009840: chloroplastic endopeptidase Clp complex	5.36E-04
8	GO:0005655: nucleolar ribonuclease P complex	5.36E-04
9	GO:0009536: plastid	6.75E-04
10	GO:0042644: chloroplast nucleoid	9.20E-04
11	GO:0031901: early endosome membrane	9.20E-04
12	GO:0009535: chloroplast thylakoid membrane	1.66E-03
13	GO:0009532: plastid stroma	2.26E-03
14	GO:0016020: membrane	3.76E-03
15	GO:0009295: nucleoid	4.32E-03
16	GO:0030529: intracellular ribonucleoprotein complex	4.67E-03
17	GO:0031201: SNARE complex	7.43E-03
18	GO:0009579: thylakoid	1.05E-02
19	GO:0005840: ribosome	1.86E-02
20	GO:0031969: chloroplast membrane	2.91E-02
21	GO:0022625: cytosolic large ribosomal subunit	3.02E-02
22	GO:0043231: intracellular membrane-bounded organelle	4.12E-02